RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 POU2AF1Q16633 256 aa9.51□□□□□ -0.89
ERCC1-202ENST00000300853 C12orf74Q32Q52 190 aa9.51□□□□□ -0.89
ERCC1-202ENST00000300853 DPF1Q92782 380 aa9.51□□□□□ -0.89
ERCC1-202ENST00000300853 URB1-AS1Q96HZ7 61 aa9.51□□□□□ -0.89
ERCC1-202ENST00000300853 COL6A3P12111 3177 aa9.51□□□□□ -0.89
ERCC1-202ENST00000300853 IGLL5B9A064 214 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 ZNF562Q6V9R5 426 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 C8orf49Q96NF6 230 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 SRSF8Q9BRL6 282 aaKnown RBP9.5□□□□□ -0.89
ERCC1-202ENST00000300853 C9orf172C9J069 976 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 TMEM78Q5T7P6 136 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 C9orf106Q8NAJ2 232 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 DDB2Q92466 427 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 VCX2Q9H322 139 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 IGHV3OR16-13A0A075B7E8 117 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 IGHV3-74A0A0B4J1X5 117 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 VWC2LB2RUY7 222 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 TMEM262E9PQX1 116 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 NEGR1Q7Z3B1 354 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 TANC2Q9HCD6 1990 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 ABCA4P78363 2273 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 CREBBPQ92793 2442 aa9.5□□□□□ -0.89
ERCC1-202ENST00000300853 FABP5P3A8MUU1 101 aa9.49□□□□□ -0.89
ERCC1-202ENST00000300853 MFAP4P55083 255 aa9.49□□□□□ -0.89
ERCC1-202ENST00000300853 C1orf159Q96HA4 380 aa9.49□□□□□ -0.89
ERCC1-202ENST00000300853 SPAG8Q99932 426 aaPredicted RBP9.49□□□□□ -0.89
ERCC1-202ENST00000300853 IGHV3-23P01764 117 aa9.49□□□□□ -0.89
ERCC1-202ENST00000300853 UFSP1Q6NVU6 142 aa9.49□□□□□ -0.89
ERCC1-202ENST00000300853 MRPL35Q9NZE8 188 aaKnown RBP9.49□□□□□ -0.89
ERCC1-202ENST00000300853 TNFRSF6BO95407 300 aa9.49□□□□□ -0.89
ERCC1-202ENST00000300853 LINC01549A6NIU2 74 aa9.48□□□□□ -0.89
ERCC1-202ENST00000300853 APOBEC3AP31941 199 aaPredicted RBP9.48□□□□□ -0.89
ERCC1-202ENST00000300853 TMEM170BQ5T4T1 132 aa9.48□□□□□ -0.89
ERCC1-202ENST00000300853 PPP1R27Q86WC6 154 aa9.48□□□□□ -0.89
ERCC1-202ENST00000300853 C1orf162Q8NEQ5 155 aaPredicted RBP9.48□□□□□ -0.89
ERCC1-202ENST00000300853 MALRD1Q5VYJ5 2156 aa9.48□□□□□ -0.89
ERCC1-202ENST00000300853 B5MCH6 92 aa9.48□□□□□ -0.89
ERCC1-202ENST00000300853 EMP1P54849 157 aa9.48□□□□□ -0.89
ERCC1-202ENST00000300853 ARRDC1-AS1Q9H2J1 176 aa9.48□□□□□ -0.89
ERCC1-202ENST00000300853 SPAARA0A1B0GVQ0 90 aa9.48□□□□□ -0.89
ERCC1-202ENST00000300853 M0R381 172 aa9.48□□□□□ -0.89
ERCC1-202ENST00000300853 DEFB109BQ30KR1 87 aa9.48□□□□□ -0.89
ERCC1-202ENST00000300853 C19orf71A6NCJ1 209 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 UTF1Q5T230 341 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 IGFL4Q6B9Z1 124 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 MRPL36Q9P0J6 103 aaKnown RBP9.47□□□□□ -0.89
ERCC1-202ENST00000300853 KLF12Q9Y4X4 402 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 PRSS2P07478 247 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 DLX6P56179 175 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 LAGE3Q14657 143 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 RRN3P1Q2M238 152 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 ANXA2RQ3ZCQ2 193 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 C17orf77Q96MU5 243 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 C20orf78Q9BR46 151 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 RAB1BQ9H0U4 201 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 REV3LO60673 3130 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 IGKV3-15P01624 115 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 SRSF1Q07955 248 aaKnown RBP eCLIP9.47□□□□□ -0.89
ERCC1-202ENST00000300853 C16orf54Q6UWD8 224 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 PRSS22Q9GZN4 317 aa9.47□□□□□ -0.89
ERCC1-202ENST00000300853 LY6G6EA0A0G2JKS1 128 aa9.46□□□□□ -0.89
ERCC1-202ENST00000300853 CCDC144NLQ6NUI1 221 aa9.46□□□□□ -0.89
ERCC1-202ENST00000300853 C8orf86Q6ZUL3 223 aa9.46□□□□□ -0.89
ERCC1-202ENST00000300853 GAFA1Q96PS6 74 aa9.46□□□□□ -0.89
ERCC1-202ENST00000300853 U3KQA8 63 aa9.46□□□□□ -0.89
ERCC1-202ENST00000300853 C22orf46C9J442 243 aa9.46□□□□□ -0.9
ERCC1-202ENST00000300853 LINC01559Q495D7 138 aa9.46□□□□□ -0.9
ERCC1-202ENST00000300853 PPDPFLQ8WWR9 84 aa9.46□□□□□ -0.9
ERCC1-202ENST00000300853 LTBP2Q14767 1821 aa9.46□□□□□ -0.9
ERCC1-202ENST00000300853 TRBV19A0A075B6N1 114 aa9.46□□□□□ -0.9
ERCC1-202ENST00000300853 NTN3O00634 580 aaPredicted RBP9.46□□□□□ -0.9
ERCC1-202ENST00000300853 LGALS3P17931 250 aaKnown RBP9.46□□□□□ -0.9
ERCC1-202ENST00000300853 PLNP26678 52 aa9.46□□□□□ -0.9
ERCC1-202ENST00000300853 PVRIGQ6DKI7 326 aa9.46□□□□□ -0.9
ERCC1-202ENST00000300853 TMEM75Q8N9X5 138 aa9.46□□□□□ -0.9
ERCC1-202ENST00000300853 IGHV3-49A0A0A0MS15 119 aa9.45□□□□□ -0.9
ERCC1-202ENST00000300853 IGHV3-66A0A0C4DH42 116 aa9.45□□□□□ -0.9
ERCC1-202ENST00000300853 IGKV3-7A0A075B6H7 116 aa9.45□□□□□ -0.9
ERCC1-202ENST00000300853 E7EUB6 86 aa9.45□□□□□ -0.9
ERCC1-202ENST00000300853 IGHV1-46P01743 117 aa9.45□□□□□ -0.9
ERCC1-202ENST00000300853 ASCL5Q7RTU5 278 aa9.45□□□□□ -0.9
ERCC1-202ENST00000300853 TMEM105Q8N8V8 129 aa9.45□□□□□ -0.9
ERCC1-202ENST00000300853 MLST8Q9BVC4 326 aa9.45□□□□□ -0.9
ERCC1-202ENST00000300853 SPANXB1Q9NS25 103 aaPredicted RBP9.45□□□□□ -0.9
ERCC1-202ENST00000300853 GP9P14770 177 aa9.45□□□□□ -0.9
ERCC1-202ENST00000300853 C1orf229Q6ZS94 237 aaPredicted RBP9.45□□□□□ -0.9
ERCC1-202ENST00000300853 PHLDA3Q9Y5J5 127 aa9.45□□□□□ -0.9
ERCC1-202ENST00000300853 DIAPH2-AS1Q14236 149 aa9.44□□□□□ -0.9
ERCC1-202ENST00000300853 C1orf122Q6ZSJ8 110 aa9.44□□□□□ -0.9
ERCC1-202ENST00000300853 H7C1H1 209 aa9.44□□□□□ -0.9
ERCC1-202ENST00000300853 TMEM200BQ69YZ2 307 aa9.44□□□□□ -0.9
ERCC1-202ENST00000300853 DOPEY2Q9Y3R5 2298 aa9.44□□□□□ -0.9
ERCC1-202ENST00000300853 SHANK2-AS3Q9BTD1 123 aa9.44□□□□□ -0.9
ERCC1-202ENST00000300853 EFNA4P52798 201 aa9.43□□□□□ -0.9
ERCC1-202ENST00000300853 LYPD1Q8N2G4 141 aa9.43□□□□□ -0.9
ERCC1-202ENST00000300853 ZNF256Q9Y2P7 627 aaPredicted RBP9.43□□□□□ -0.9
ERCC1-202ENST00000300853 GATA1P15976 413 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms