RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 RPL27AP46776 148 aaKnown RBP8.69□□□□□ -1.02
SNX20-201ENST00000300590 TMEM164Q5U3C3 297 aa8.69□□□□□ -1.02
SNX20-201ENST00000300590 TMEM75Q8N9X5 138 aa8.69□□□□□ -1.02
SNX20-201ENST00000300590 HIST1H4GQ99525 98 aa8.69□□□□□ -1.02
SNX20-201ENST00000300590 TRGV9Q99603 122 aa8.69□□□□□ -1.02
SNX20-201ENST00000300590 RASL11BQ9BPW5 248 aa8.69□□□□□ -1.02
SNX20-201ENST00000300590 ADGRG4Q8IZF6 3080 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 TRAV40A0A0B4J280 105 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 NPIPB5A8MRT5 1133 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 PRR33A8MZF0 331 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 CLEC3BP05452 202 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 GAGE13Q4V321 117 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 TCTEX1D4Q5JR98 221 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 FOXI2Q6ZQN5 318 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 ZNF833PQ6ZTB9 187 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 Q8TAT8 98 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 SCGB2A1O75556 95 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 CCL11P51671 97 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 FER1L6-AS2Q96M78 137 aa8.68□□□□□ -1.02
SNX20-201ENST00000300590 A0A1W2PNU3 283 aaPredicted RBP8.67□□□□□ -1.02
SNX20-201ENST00000300590 ZNF562Q6V9R5 426 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 CEND1Q8N111 149 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 SMIM20Q8N5G0 67 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 MAPKAPK5-AS1Q8N8E1 139 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 IGKV2-40A0A087WW87 121 aaPredicted RBP8.67□□□□□ -1.02
SNX20-201ENST00000300590 WI2-2373I1.2A0A1W2PRP0 233 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 TMEM8BA6NDV4 472 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 IGKV2D-40P01614 121 aaPredicted RBP8.67□□□□□ -1.02
SNX20-201ENST00000300590 IGKCP01834 107 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 NGBQ9NPG2 151 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 CYSLTR1Q9Y271 337 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 IGHV3OR16-8A0A075B7F1 116 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 F8W1H4 67 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 PRRG2O14669 202 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 SH2D1AO60880 128 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 IGLV2-23P01705 113 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 ORM1P02763 201 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 TMEM178AQ8NBL3 297 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 PROCRQ9UNN8 238 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 MALRD1Q5VYJ5 2156 aa8.67□□□□□ -1.02
SNX20-201ENST00000300590 NDUFA3O95167 84 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 IGHV1-46P01743 117 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 PLGLAQ15195 96 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 TMEM200BQ69YZ2 307 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 PHLDA1Q8WV24 401 aaPredicted RBP8.66□□□□□ -1.02
SNX20-201ENST00000300590 HHLA3Q9XRX5 114 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 UFC1Q9Y3C8 167 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 TRBV19A0A075B6N1 114 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 IGLV1-44P01699 117 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 IL4P05112 153 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 ODF1Q14990 250 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 C12orf74Q32Q52 190 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 CCL17Q92583 94 aa8.66□□□□□ -1.02
SNX20-201ENST00000300590 MT-ATP8P03928 68 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 KLF17Q5JT82 389 aaPredicted RBP8.65□□□□□ -1.02
SNX20-201ENST00000300590 C8orf86Q6ZUL3 223 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 TMEM158Q8WZ71 300 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 MAP1LC3AQ9H492 121 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 ZNF71Q9NQZ8 489 aaPredicted RBP8.65□□□□□ -1.02
SNX20-201ENST00000300590 ATMQ13315 3056 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 A0A1B0GW15 77 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 E9PLD3 99 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 ZNF418Q8TF45 676 aaPredicted RBP8.65□□□□□ -1.02
SNX20-201ENST00000300590 IGFBPL1Q8WX77 278 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 SPATA25Q9BR10 227 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 SCNM1Q9BWG6 230 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 FBXL15Q9H469 300 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 LINC00312Q9Y6C7 94 aa8.65□□□□□ -1.02
SNX20-201ENST00000300590 TGFAP01135 160 aa8.65□□□□□ -1.03
SNX20-201ENST00000300590 WT1P19544 449 aaPredicted RBP8.65□□□□□ -1.03
SNX20-201ENST00000300590 KLK15Q9H2R5 256 aa8.65□□□□□ -1.03
SNX20-201ENST00000300590 MRPL35Q9NZE8 188 aaKnown RBP8.65□□□□□ -1.03
SNX20-201ENST00000300590 SLC25A15Q9Y619 301 aa8.65□□□□□ -1.03
SNX20-201ENST00000300590 IGHV3-35A0A0C4DH35 117 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 CRYGCP07315 174 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 EGR2P11161 476 aaPredicted RBP8.64□□□□□ -1.03
SNX20-201ENST00000300590 SIGLEC15Q6ZMC9 328 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 GLMPQ8WWB7 406 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 PTH2Q96A98 100 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 RAI1Q7Z5J4 1906 aaPredicted RBP8.64□□□□□ -1.03
SNX20-201ENST00000300590 LOC107984156A0A0G2JMH3 177 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 TM4SF5O14894 197 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 ARL17AQ8IVW1 177 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 GLRXP35754 106 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 LYPD2Q6UXB3 125 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 ZNF493Q6ZR52 646 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 TTC9CQ8N5M4 171 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 AAMDCQ9H7C9 122 aa8.64□□□□□ -1.03
SNX20-201ENST00000300590 EP300Q09472 2414 aaPredicted RBP8.63□□□□□ -1.03
SNX20-201ENST00000300590 TNRC18O15417 2968 aaPredicted RBP8.63□□□□□ -1.03
SNX20-201ENST00000300590 A6NJY4 79 aa8.63□□□□□ -1.03
SNX20-201ENST00000300590 DPM2O94777 84 aa8.63□□□□□ -1.03
SNX20-201ENST00000300590 IGKV1-17P01599 117 aa8.63□□□□□ -1.03
SNX20-201ENST00000300590 Q6AWC8 147 aa8.63□□□□□ -1.03
SNX20-201ENST00000300590 C5orf64Q2M2E5 130 aa8.63□□□□□ -1.03
SNX20-201ENST00000300590 MGAQ8IWI9 3026 aa8.63□□□□□ -1.03
SNX20-201ENST00000300590 LAMA5O15230 3695 aa8.63□□□□□ -1.03
SNX20-201ENST00000300590 TNFRSF6BO95407 300 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 HLA-DMBP28068 263 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 ZNF80P51504 273 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms