RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 MBD6Q96DN6 1003 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 TRGV9Q99603 122 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 IGHV3OR16-8A0A075B7F1 116 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 TMSB15BA0A087X1C1 80 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 GAGE12HA6NDE8 117 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 TIMM23O14925 209 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 IGHV3-23P01764 117 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 HBBP68871 147 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 RABAC1Q9UI14 185 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 IGHV3-35A0A0C4DH35 117 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 K7EP34 96 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 PSG3Q16557 428 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 GTSF1Q8WW33 167 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 SLC25A39Q9BZJ4 359 aaPredicted RBP10.66□□□□□ -0.7
CTDP1-202ENST00000299543 KLRD1Q13241 179 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 SFTA2Q6UW10 78 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 ADAMTSL5Q6ZMM2 481 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 FAM231DQ6ZW35 169 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 C18orf15Q96N68 181 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 SPG11Q96JI7 2443 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 C9orf118A6NHY6 69 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 J3QR89 54 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 K7ERJ3 54 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 TNFRSF13BO14836 293 aaPredicted RBP10.66□□□□□ -0.7
CTDP1-202ENST00000299543 FCGR2BP31994 310 aaPredicted RBP10.66□□□□□ -0.7
CTDP1-202ENST00000299543 GEMIN7Q9H840 131 aaKnown RBP10.66□□□□□ -0.7
CTDP1-202ENST00000299543 SS18L2Q9UHA2 77 aa10.66□□□□□ -0.7
CTDP1-202ENST00000299543 PRSS3P2Q8NHM4 247 aa10.65□□□□□ -0.7
CTDP1-202ENST00000299543 NCBP2LA6PVI3 153 aaKnown RBP10.65□□□□□ -0.7
CTDP1-202ENST00000299543 B9A039 149 aa10.65□□□□□ -0.7
CTDP1-202ENST00000299543 INS-IGF2F8WCM5 200 aa10.65□□□□□ -0.7
CTDP1-202ENST00000299543 M0R3E3 92 aa10.65□□□□□ -0.7
CTDP1-202ENST00000299543 IL4P05112 153 aa10.65□□□□□ -0.7
CTDP1-202ENST00000299543 GP9P14770 177 aa10.65□□□□□ -0.7
CTDP1-202ENST00000299543 INSL3P51460 131 aa10.65□□□□□ -0.71
CTDP1-202ENST00000299543 SAMD5Q5TGI4 173 aa10.65□□□□□ -0.71
CTDP1-202ENST00000299543 LCNL1Q6ZST4 164 aa10.65□□□□□ -0.71
CTDP1-202ENST00000299543 KAAG1Q9UBP8 84 aa10.65□□□□□ -0.71
CTDP1-202ENST00000299543 COL12A1Q99715 3063 aa10.64□□□□□ -0.71
CTDP1-202ENST00000299543 IGLV1-47P01700 117 aa10.64□□□□□ -0.71
CTDP1-202ENST00000299543 PPIFP30405 207 aaKnown RBP10.64□□□□□ -0.71
CTDP1-202ENST00000299543 MYCNOSP40205 109 aa10.64□□□□□ -0.71
CTDP1-202ENST00000299543 AMTNQ6UX39 209 aa10.64□□□□□ -0.71
CTDP1-202ENST00000299543 TMUB1Q9BVT8 246 aa10.64□□□□□ -0.71
CTDP1-202ENST00000299543 TEX22C9J3V5 150 aa10.64□□□□□ -0.71
CTDP1-202ENST00000299543 CRYGCP07315 174 aa10.64□□□□□ -0.71
CTDP1-202ENST00000299543 ANXA2RQ3ZCQ2 193 aa10.64□□□□□ -0.71
CTDP1-202ENST00000299543 FMC1Q96HJ9 113 aa10.64□□□□□ -0.71
CTDP1-202ENST00000299543 A1L4Q6 167 aa10.63□□□□□ -0.71
CTDP1-202ENST00000299543 WFDC2Q14508 124 aa10.63□□□□□ -0.71
CTDP1-202ENST00000299543 ZNF672Q499Z4 452 aaPredicted RBP10.63□□□□□ -0.71
CTDP1-202ENST00000299543 SERTM2A0A1B0GWG4 89 aa10.63□□□□□ -0.71
CTDP1-202ENST00000299543 SEC11AP67812 179 aa10.63□□□□□ -0.71
CTDP1-202ENST00000299543 BCL6BQ8N143 479 aaPredicted RBP10.63□□□□□ -0.71
CTDP1-202ENST00000299543 SMPXQ9UHP9 88 aa10.63□□□□□ -0.71
CTDP1-202ENST00000299543 CFAP161Q6P656 301 aa10.63□□□□□ -0.71
CTDP1-202ENST00000299543 FA2HQ7L5A8 372 aa10.63□□□□□ -0.71
CTDP1-202ENST00000299543 SCNM1Q9BWG6 230 aa10.63□□□□□ -0.71
CTDP1-202ENST00000299543 TTTY13Q9BZ97 58 aa10.63□□□□□ -0.71
CTDP1-202ENST00000299543 IGKV1-17P01599 117 aa10.62□□□□□ -0.71
CTDP1-202ENST00000299543 RBPMS2Q6ZRY4 209 aaKnown RBP10.62□□□□□ -0.71
CTDP1-202ENST00000299543 ARPC1AQ92747 370 aa10.62□□□□□ -0.71
CTDP1-202ENST00000299543 C7orf69Q9H7B7 122 aa10.62□□□□□ -0.71
CTDP1-202ENST00000299543 CCL21O00585 134 aa10.62□□□□□ -0.71
CTDP1-202ENST00000299543 MLST8Q9BVC4 326 aa10.62□□□□□ -0.71
CTDP1-202ENST00000299543 NHP2Q9NX24 153 aaKnown RBP10.62□□□□□ -0.71
CTDP1-202ENST00000299543 WIPF2Q8TF74 440 aaPredicted RBP10.62□□□□□ -0.71
CTDP1-202ENST00000299543 A0A1W2PPM0 123 aa10.61□□□□□ -0.71
CTDP1-202ENST00000299543 LTAP01374 205 aa10.61□□□□□ -0.71
CTDP1-202ENST00000299543 APOHP02749 345 aaPredicted RBP10.61□□□□□ -0.71
CTDP1-202ENST00000299543 LIPFP07098 398 aa10.61□□□□□ -0.71
CTDP1-202ENST00000299543 Q86TA4 180 aa10.61□□□□□ -0.71
CTDP1-202ENST00000299543 C8orf31Q8N9H6 132 aa10.61□□□□□ -0.71
CTDP1-202ENST00000299543 KLF12Q9Y4X4 402 aa10.61□□□□□ -0.71
CTDP1-202ENST00000299543 CD300EQ496F6 205 aaPredicted RBP10.61□□□□□ -0.71
CTDP1-202ENST00000299543 IGFL4Q6B9Z1 124 aa10.61□□□□□ -0.71
CTDP1-202ENST00000299543 RASL11AQ6T310 242 aa10.61□□□□□ -0.71
CTDP1-202ENST00000299543 ZNF48Q96MX3 618 aaPredicted RBP10.61□□□□□ -0.71
CTDP1-202ENST00000299543 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
CTDP1-202ENST00000299543 I3L2K1 104 aa10.6□□□□□ -0.71
CTDP1-202ENST00000299543 C1RLQ9NZP8 487 aa10.6□□□□□ -0.71
CTDP1-202ENST00000299543 H3BMG7 143 aa10.6□□□□□ -0.71
CTDP1-202ENST00000299543 CRYGBP07316 175 aa10.6□□□□□ -0.71
CTDP1-202ENST00000299543 ARMS2P0C7Q2 107 aa10.6□□□□□ -0.71
CTDP1-202ENST00000299543 PCP2Q8IVA1 136 aa10.6□□□□□ -0.71
CTDP1-202ENST00000299543 COX8AP10176 69 aa10.6□□□□□ -0.71
CTDP1-202ENST00000299543 ATP5L2Q7Z4Y8 100 aa10.6□□□□□ -0.71
CTDP1-202ENST00000299543 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
CTDP1-202ENST00000299543 A0A1B0GXF2 115 aa10.59□□□□□ -0.71
CTDP1-202ENST00000299543 H3BRM9 83 aa10.59□□□□□ -0.71
CTDP1-202ENST00000299543 FAM106CPP0CH98 169 aa10.59□□□□□ -0.71
CTDP1-202ENST00000299543 CACNG7P62955 275 aa10.59□□□□□ -0.71
CTDP1-202ENST00000299543 FAM106AQ4KMX7 169 aa10.59□□□□□ -0.71
CTDP1-202ENST00000299543 SHISA2Q6UWI4 295 aa10.59□□□□□ -0.71
CTDP1-202ENST00000299543 RNF125Q96EQ8 232 aa10.59□□□□□ -0.71
CTDP1-202ENST00000299543 DPM3Q9P2X0 92 aa10.59□□□□□ -0.71
CTDP1-202ENST00000299543 SMIM13P0DJ93 91 aa10.59□□□□□ -0.71
CTDP1-202ENST00000299543 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.59□□□□□ -0.717e-8■■■■□ 22.8
CTDP1-202ENST00000299543 C19orf71A6NCJ1 209 aa10.59□□□□□ -0.71
CTDP1-202ENST00000299543 K7EIM0 57 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms