RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 NPIPB6E9PJ23 425 aa9.04□□□□□ -0.96
TRUB1-201ENST00000298746 WFDC2Q14508 124 aa9.04□□□□□ -0.96
TRUB1-201ENST00000298746 WFDC12Q8WWY7 111 aa9.04□□□□□ -0.96
TRUB1-201ENST00000298746 SIGLEC9Q9Y336 463 aa9.04□□□□□ -0.96
TRUB1-201ENST00000298746 A0A1B0GWB2 263 aa9.04□□□□□ -0.96
TRUB1-201ENST00000298746 FTH1P19P0C7X4 201 aa9.04□□□□□ -0.96
TRUB1-201ENST00000298746 VGLL1Q99990 258 aa9.04□□□□□ -0.96
TRUB1-201ENST00000298746 IGLV2-23P01705 113 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 IGKCP01834 107 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 GATA4P43694 442 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 FAM169BQ8N8A8 192 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 TMEM75Q8N9X5 138 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 ARPC1AQ92747 370 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 NDUFA3O95167 84 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 MYOZ3Q8TDC0 251 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 HIF1ANQ9NWT6 349 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 MSRB1Q9NZV6 116 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 IGLV3-9A0A075B6K5 115 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 GAGE12HA6NDE8 117 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 C17orf100A8MU93 164 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 IGLV2-11P01706 119 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 WT1P19544 449 aaPredicted RBP9.03□□□□□ -0.96
TRUB1-201ENST00000298746 CRIP1P50238 77 aa9.03□□□□□ -0.96
TRUB1-201ENST00000298746 ZNF785A8K8V0 405 aa9.02□□□□□ -0.96
TRUB1-201ENST00000298746 ARL3P36405 182 aa9.02□□□□□ -0.96
TRUB1-201ENST00000298746 NEGR1Q7Z3B1 354 aa9.02□□□□□ -0.96
TRUB1-201ENST00000298746 A0A096LNJ9 63 aa9.02□□□□□ -0.97
TRUB1-201ENST00000298746 IGKV2D-26A0A0A0MRZ7 120 aa9.02□□□□□ -0.97
TRUB1-201ENST00000298746 TRAV40A0A0B4J280 105 aa9.02□□□□□ -0.97
TRUB1-201ENST00000298746 TTC9CQ8N5M4 171 aa9.02□□□□□ -0.97
TRUB1-201ENST00000298746 TMEM158Q8WZ71 300 aa9.02□□□□□ -0.97
TRUB1-201ENST00000298746 DKK4Q9UBT3 224 aa9.02□□□□□ -0.97
TRUB1-201ENST00000298746 ARHGAP32A7KAX9 2087 aa9.02□□□□□ -0.97
TRUB1-201ENST00000298746 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
TRUB1-201ENST00000298746 SIVA1O15304 175 aa9.02□□□□□ -0.97
TRUB1-201ENST00000298746 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
TRUB1-201ENST00000298746 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.97
TRUB1-201ENST00000298746 TECTAO75443 2155 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 IGHV3OR16-13A0A075B7E8 117 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 IGHV3-74A0A0B4J1X5 117 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 TMEM8BA6NDV4 472 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 NCBP2LA6PVI3 153 aaKnown RBP9.01□□□□□ -0.97
TRUB1-201ENST00000298746 DPM2O94777 84 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 IGKV1-17P01599 117 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 SMIM17P0DL12 118 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 IGHV1-8P0DP01 117 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 GATA1P15976 413 aaPredicted RBP9.01□□□□□ -0.97
TRUB1-201ENST00000298746 BMI1P35226 326 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 ONECUT1Q9UBC0 465 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 CHTOPQ9Y3Y2 248 aaKnown RBP9.01□□□□□ -0.97
TRUB1-201ENST00000298746 ZFHX4Q86UP3 3567 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 TRBV25-1A0A075B6N4 114 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 J3KRW8 73 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 CRYGCP07315 174 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 SIGLEC15Q6ZMC9 328 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 IGFBPL1Q8WX77 278 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 DPF1Q92782 380 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 INS-IGF2F8WCM5 200 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 CD300EQ496F6 205 aaPredicted RBP9.01□□□□□ -0.97
TRUB1-201ENST00000298746 GAGE13Q4V321 117 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 C22orf34Q6ZV56 151 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 TNFRSF14Q92956 283 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 ABHD17AQ96GS6 310 aa9.01□□□□□ -0.97
TRUB1-201ENST00000298746 SCGB1D4Q6XE38 83 aa9□□□□□ -0.97
TRUB1-201ENST00000298746 TMEM14CQ9P0S9 112 aa9□□□□□ -0.97
TRUB1-201ENST00000298746 CREBBPQ92793 2442 aa9□□□□□ -0.97
TRUB1-201ENST00000298746 LYNX1G3V0Z9 82 aa9□□□□□ -0.97
TRUB1-201ENST00000298746 LYNX1P0DP58 116 aa9□□□□□ -0.97
TRUB1-201ENST00000298746 EGR2P11161 476 aaPredicted RBP9□□□□□ -0.97
TRUB1-201ENST00000298746 CKS1BP61024 79 aa9□□□□□ -0.97
TRUB1-201ENST00000298746 IGHV1-3A0A0C4DH29 117 aa8.99□□□□□ -0.97
TRUB1-201ENST00000298746 TMEM178BH3BS89 294 aa8.99□□□□□ -0.97
TRUB1-201ENST00000298746 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
TRUB1-201ENST00000298746 CD59P13987 128 aa8.99□□□□□ -0.97
TRUB1-201ENST00000298746 SRSF9Q13242 221 aaKnown RBP eCLIP8.99□□□□□ -0.97
TRUB1-201ENST00000298746 PIP4P2Q8N4L2 257 aa8.99□□□□□ -0.97
TRUB1-201ENST00000298746 ZNF418Q8TF45 676 aaPredicted RBP8.99□□□□□ -0.97
TRUB1-201ENST00000298746 RAI1Q7Z5J4 1906 aaPredicted RBP8.99□□□□□ -0.97
TRUB1-201ENST00000298746 IGHV3-66A0A0C4DH42 116 aa8.99□□□□□ -0.97
TRUB1-201ENST00000298746 BSPH1Q075Z2 132 aa8.99□□□□□ -0.97
TRUB1-201ENST00000298746 TEX36Q5VZQ5 186 aa8.99□□□□□ -0.97
TRUB1-201ENST00000298746 SEM1Q6ZVN7 128 aa8.99□□□□□ -0.97
TRUB1-201ENST00000298746 MRPL35Q9NZE8 188 aaKnown RBP8.99□□□□□ -0.97
TRUB1-201ENST00000298746 COL6A6A6NMZ7 2263 aa8.99□□□□□ -0.97
TRUB1-201ENST00000298746 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.98□□□□□ -0.97
TRUB1-201ENST00000298746 HLA-DMBP28068 263 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 ATP5G2Q06055 141 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 ZNF491Q8N8L2 437 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 NXT2Q9NPJ8 142 aaKnown RBP8.98□□□□□ -0.97
TRUB1-201ENST00000298746 CYSLTR1Q9Y271 337 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 C16orf97H3BN30 126 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 RPL7P18124 248 aaKnown RBP8.98□□□□□ -0.97
TRUB1-201ENST00000298746 LOXP28300 417 aaPredicted RBP8.98□□□□□ -0.97
TRUB1-201ENST00000298746 RAB9AP51151 201 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 ASCL5Q7RTU5 278 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 CEND1Q8N111 149 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 LINC00574Q9H8X3 128 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 CTSZQ9UBR2 303 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 MUC3AQ02505 3323 aa8.98□□□□□ -0.97
TRUB1-201ENST00000298746 GAS8-AS1O95177 125 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms