RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 RNF182Q8N6D2 247 aa18.53■□□□□ 0.56
GTF2A1-201ENST00000298173 LINC00482Q8N8I6 264 aa18.53■□□□□ 0.56
GTF2A1-201ENST00000298173 ISLRO14498 428 aa18.52■□□□□ 0.56
GTF2A1-201ENST00000298173 MRPL53Q96EL3 112 aaKnown RBP18.52■□□□□ 0.56
GTF2A1-201ENST00000298173 NIPSNAP3BQ9BS92 247 aa18.52■□□□□ 0.56
GTF2A1-201ENST00000298173 SDF2L1Q9HCN8 221 aa18.52■□□□□ 0.56
GTF2A1-201ENST00000298173 ZNF705FA8MVS1 300 aaPredicted RBP18.51■□□□□ 0.55
GTF2A1-201ENST00000298173 AKR1C3P42330 323 aa18.51■□□□□ 0.55
GTF2A1-201ENST00000298173 PSG3Q16557 428 aa18.51■□□□□ 0.55
GTF2A1-201ENST00000298173 TMEM183BQ1AE95 376 aa18.51■□□□□ 0.55
GTF2A1-201ENST00000298173 SAMD13Q5VXD3 122 aa18.51■□□□□ 0.55
GTF2A1-201ENST00000298173 GBGT1Q8N5D6 347 aa18.51■□□□□ 0.55
GTF2A1-201ENST00000298173 C9JCJ5 164 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 PF4P02776 101 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 CSN1S1P47710 185 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 CNN1P51911 297 aaKnown RBP18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 TAS2R60P59551 318 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 TMEM241Q24JQ0 296 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 TMEM158Q8WZ71 300 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 C20orf173Q96LM9 149 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 NAT8Q9UHE5 227 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 RPH3ALQ9UNE2 315 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 TRAV34A0A0B4J273 112 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 K7EQG2 157 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 IGLV2-11P01706 119 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 GOLT1AQ6ZVE7 132 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 SVBPQ8N300 66 aa18.5■□□□□ 0.55
GTF2A1-201ENST00000298173 TSPAN4O14817 238 aa18.49■□□□□ 0.55
GTF2A1-201ENST00000298173 TMEM61Q8N0U2 210 aa18.49■□□□□ 0.55
GTF2A1-201ENST00000298173 DYNLRB2Q8TF09 96 aa18.49■□□□□ 0.55
GTF2A1-201ENST00000298173 TVP23CQ96ET8 276 aa18.49■□□□□ 0.55
GTF2A1-201ENST00000298173 SERTM2A0A1B0GWG4 89 aa18.48■□□□□ 0.55
GTF2A1-201ENST00000298173 S100A9P06702 114 aaKnown RBP18.48■□□□□ 0.55
GTF2A1-201ENST00000298173 IGF2BP2-AS1Q96M15 143 aa18.48■□□□□ 0.55
GTF2A1-201ENST00000298173 PRAC2D3DTV9 90 aa18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 PRB4P10163 310 aaPredicted RBP18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 CD300EQ496F6 205 aaPredicted RBP18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 WFDC3Q8IUB2 231 aa18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 FMC1Q96HJ9 113 aa18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 TRAV2A0A0B4J234 112 aa18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 TRAV25A0A0B4J276 109 aa18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 TRBV6-1A0A0K0K1D8 114 aa18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 PAFAH1B2P68402 229 aa18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 RBPMS2Q6ZRY4 209 aaKnown RBP18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 TMEM75Q8N9X5 138 aa18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 CLRN3Q8NCR9 226 aa18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 SGK494Q96LW2 274 aa18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 LY96Q9Y6Y9 160 aa18.47■□□□□ 0.55
GTF2A1-201ENST00000298173 TRAV8-1A0A0A6YYK1 113 aa18.46■□□□□ 0.55
GTF2A1-201ENST00000298173 DNASE2O00115 360 aaPredicted RBP18.46■□□□□ 0.55
GTF2A1-201ENST00000298173 ID1P41134 155 aa18.46■□□□□ 0.55
GTF2A1-201ENST00000298173 RPL23P62829 140 aaKnown RBP18.46■□□□□ 0.55
GTF2A1-201ENST00000298173 PNRC1Q12796 327 aaPredicted RBP18.46■□□□□ 0.55
GTF2A1-201ENST00000298173 CENPWQ5EE01 88 aa18.46■□□□□ 0.55
GTF2A1-201ENST00000298173 OCC1Q8TAD7 63 aa18.46■□□□□ 0.55
GTF2A1-201ENST00000298173 RBAKDNA6NC62 111 aa18.45■□□□□ 0.54
GTF2A1-201ENST00000298173 PGPEP1LA6NFU8 196 aa18.45■□□□□ 0.54
GTF2A1-201ENST00000298173 K7EQM0 130 aa18.45■□□□□ 0.54
GTF2A1-201ENST00000298173 IGLV2-8P01709 118 aa18.45■□□□□ 0.54
GTF2A1-201ENST00000298173 LINC01551Q86U37 167 aa18.45■□□□□ 0.54
GTF2A1-201ENST00000298173 FAM24BQ8N5W8 94 aa18.45■□□□□ 0.54
GTF2A1-201ENST00000298173 SNAPINO95295 136 aa18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 TFPI2P48307 235 aa18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 GNG4P50150 75 aa18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 UBE2G1P62253 170 aa18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 ATRAIDQ6UW56 229 aa18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 SORL1Q92673 2214 aa18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 IGKV2-40A0A087WW87 121 aaPredicted RBP18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 SAP30O75446 220 aa18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 LTAP01374 205 aa18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 IGKV2D-40P01614 121 aaPredicted RBP18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 IGLV1-51P01701 117 aa18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 C3orf56Q8N813 242 aa18.44■□□□□ 0.54
GTF2A1-201ENST00000298173 IZUMO1RA6ND01 250 aa18.43■□□□□ 0.54
GTF2A1-201ENST00000298173 C12orf54Q6X4T0 127 aa18.43■□□□□ 0.54
GTF2A1-201ENST00000298173 BAGE2Q86Y30 109 aa18.43■□□□□ 0.54
GTF2A1-201ENST00000298173 VGLL1Q99990 258 aa18.43■□□□□ 0.54
GTF2A1-201ENST00000298173 MLST8Q9BVC4 326 aa18.43■□□□□ 0.54
GTF2A1-201ENST00000298173 PSG8Q9UQ74 426 aa18.43■□□□□ 0.54
GTF2A1-201ENST00000298173 FLI1Q01543 452 aaPredicted RBP18.42■□□□□ 0.54
GTF2A1-201ENST00000298173 SHISA2Q6UWI4 295 aa18.42■□□□□ 0.54
GTF2A1-201ENST00000298173 ZNF738Q8NE65 137 aa18.42■□□□□ 0.54
GTF2A1-201ENST00000298173 SPATA3Q8NHX4 192 aa18.42■□□□□ 0.54
GTF2A1-201ENST00000298173 SPAG8Q99932 426 aaPredicted RBP18.42■□□□□ 0.54
GTF2A1-201ENST00000298173 FBLL1A6NHQ2 334 aaKnown RBP18.41■□□□□ 0.54
GTF2A1-201ENST00000298173 Q86TA4 180 aa18.41■□□□□ 0.54
GTF2A1-201ENST00000298173 AURKAIP1Q9NWT8 199 aaPredicted RBP18.41■□□□□ 0.54
GTF2A1-201ENST00000298173 ZNF256Q9Y2P7 627 aaPredicted RBP18.41■□□□□ 0.54
GTF2A1-201ENST00000298173 K7EN84 100 aa18.41■□□□□ 0.54
GTF2A1-201ENST00000298173 M0R036 132 aa18.41■□□□□ 0.54
GTF2A1-201ENST00000298173 SNRPD3P62318 126 aaKnown RBP18.41■□□□□ 0.54
GTF2A1-201ENST00000298173 C9orf47Q6ZRZ4 202 aa18.41■□□□□ 0.54
GTF2A1-201ENST00000298173 WFDC9Q8NEX5 89 aa18.41■□□□□ 0.54
GTF2A1-201ENST00000298173 SMIM12Q96EX1 92 aa18.41■□□□□ 0.54
GTF2A1-201ENST00000298173 ZNF688P0C7X2 276 aa18.4■□□□□ 0.54
GTF2A1-201ENST00000298173 ADIRFQ15847 76 aa18.4■□□□□ 0.54
GTF2A1-201ENST00000298173 PRNTQ86SH4 94 aa18.4■□□□□ 0.54
GTF2A1-201ENST00000298173 OR2K2Q8NGT1 345 aa18.4■□□□□ 0.54
GTF2A1-201ENST00000298173 AGPAT4-IT1Q9H0P7 198 aa18.4■□□□□ 0.54
GTF2A1-201ENST00000298173 C7orf77A4D0Y5 90 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms