RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 RNF152Q8N8N0 203 aa11.05□□□□□ -0.64
C9orf3-202ENST00000297979 C5orf17Q8NAS9 161 aa11.05□□□□□ -0.64
C9orf3-202ENST00000297979 IGF2BP2-AS1Q96M15 143 aa11.05□□□□□ -0.64
C9orf3-202ENST00000297979 ZFAND3Q9H8U3 227 aa11.05□□□□□ -0.64
C9orf3-202ENST00000297979 OTORQ9NRC9 128 aa11.05□□□□□ -0.64
C9orf3-202ENST00000297979 TRBV19A0A075B6N1 114 aa11.04□□□□□ -0.64
C9orf3-202ENST00000297979 GALR1P47211 349 aa11.04□□□□□ -0.64
C9orf3-202ENST00000297979 TFPI2P48307 235 aa11.04□□□□□ -0.64
C9orf3-202ENST00000297979 CKS1BP61024 79 aa11.04□□□□□ -0.64
C9orf3-202ENST00000297979 C5orf47Q569G3 176 aa11.04□□□□□ -0.64
C9orf3-202ENST00000297979 TEX38Q6PEX7 206 aa11.04□□□□□ -0.64
C9orf3-202ENST00000297979 USMG5Q96IX5 58 aa11.04□□□□□ -0.64
C9orf3-202ENST00000297979 LINC00479Q96M42 142 aa11.04□□□□□ -0.64
C9orf3-202ENST00000297979 FOXC2Q99958 501 aa11.04□□□□□ -0.64
C9orf3-202ENST00000297979 CREBBPQ92793 2442 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 K7ERU9 68 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 PFN1P07737 140 aaKnown RBP11.03□□□□□ -0.64
C9orf3-202ENST00000297979 CFHR3Q02985 330 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 OR4C5Q8NGB2 326 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 TMEM190Q8WZ59 177 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 HELZ2Q9BYK8 2649 aaKnown RBP11.03□□□□□ -0.64
C9orf3-202ENST00000297979 TRBV24-1A0A075B6N3 115 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 IGHV3OR16-8A0A075B7F1 116 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 TSPAN13O95857 204 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 IGLV1-40P01703 118 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 RPL7P18124 248 aaKnown RBP11.03□□□□□ -0.64
C9orf3-202ENST00000297979 ERVFC1-1P60608 527 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 TEX29Q8N6K0 151 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 ORAOV1Q8WV07 137 aa11.03□□□□□ -0.64
C9orf3-202ENST00000297979 ZANQ9Y493 2812 aa11.02□□□□□ -0.64
C9orf3-202ENST00000297979 SRP14P37108 136 aaKnown RBP11.02□□□□□ -0.65
C9orf3-202ENST00000297979 RPS10P46783 165 aaKnown RBP11.02□□□□□ -0.65
C9orf3-202ENST00000297979 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.65
C9orf3-202ENST00000297979 NHLRC2Q8NBF2 726 aa11.02□□□□□ -0.65
C9orf3-202ENST00000297979 OR10G8Q8NGN5 311 aa11.02□□□□□ -0.65
C9orf3-202ENST00000297979 NBPF19A0A087WUL8 3843 aa11.02□□□□□ -0.65
C9orf3-202ENST00000297979 PPP5D1E7EU14 171 aa11.02□□□□□ -0.65
C9orf3-202ENST00000297979 HOXA3O43365 443 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-202ENST00000297979 IGLV2-8P01709 118 aa11.02□□□□□ -0.65
C9orf3-202ENST00000297979 TCRAP04437 139 aa11.02□□□□□ -0.65
C9orf3-202ENST00000297979 UBE2G1P62253 170 aa11.02□□□□□ -0.65
C9orf3-202ENST00000297979 LYPD1Q8N2G4 141 aa11.02□□□□□ -0.65
C9orf3-202ENST00000297979 EXOC3-AS1Q8N2X6 119 aa11.02□□□□□ -0.65
C9orf3-202ENST00000297979 C17orf77Q96MU5 243 aa11.02□□□□□ -0.65
C9orf3-202ENST00000297979 ISLRO14498 428 aa11.01□□□□□ -0.65
C9orf3-202ENST00000297979 PDE6HQ13956 83 aa11.01□□□□□ -0.65
C9orf3-202ENST00000297979 KCNIP4Q6PIL6 250 aa11.01□□□□□ -0.65
C9orf3-202ENST00000297979 SIGLEC15Q6ZMC9 328 aa11.01□□□□□ -0.65
C9orf3-202ENST00000297979 OR8I2Q8N0Y5 310 aa11.01□□□□□ -0.65
C9orf3-202ENST00000297979 SMIM20Q8N5G0 67 aa11.01□□□□□ -0.65
C9orf3-202ENST00000297979 CMTM2Q8TAZ6 248 aa11.01□□□□□ -0.65
C9orf3-202ENST00000297979 KLK15Q9H2R5 256 aa11.01□□□□□ -0.65
C9orf3-202ENST00000297979 GCGP01275 180 aa11.01□□□□□ -0.65
C9orf3-202ENST00000297979 KLF12Q9Y4X4 402 aa11.01□□□□□ -0.65
C9orf3-202ENST00000297979 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11□□□□□ -0.65
C9orf3-202ENST00000297979 SLC17A3O00476 420 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 RPL15P61313 204 aaKnown RBP11□□□□□ -0.65
C9orf3-202ENST00000297979 COL5A1-AS1Q5SY13 56 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 BAGE2Q86Y30 109 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 C1QL4Q86Z23 238 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 IMMP2LQ96T52 175 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 A0A0G2JLM5 398 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 CLPSL1A2RUU4 121 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 AMBPP02760 352 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 MGST1P10620 155 aaKnown RBP11□□□□□ -0.65
C9orf3-202ENST00000297979 NDUFA6P56556 154 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 FMC1Q96HJ9 113 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 PYGO2Q9BRQ0 406 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 PRSS22Q9GZN4 317 aa11□□□□□ -0.65
C9orf3-202ENST00000297979 RPL32P62910 135 aaKnown RBP10.99□□□□□ -0.65
C9orf3-202ENST00000297979 IL17RELQ6ZVW7 336 aa10.99□□□□□ -0.65
C9orf3-202ENST00000297979 NPFFR1Q9GZQ6 430 aa10.99□□□□□ -0.65
C9orf3-202ENST00000297979 METTL26Q96S19 204 aa10.99□□□□□ -0.65
C9orf3-202ENST00000297979 BUB3O43684 328 aa10.99□□□□□ -0.65
C9orf3-202ENST00000297979 TRBV12-3P01733 135 aa10.99□□□□□ -0.65
C9orf3-202ENST00000297979 IGHV3-11P01762 117 aa10.99□□□□□ -0.65
C9orf3-202ENST00000297979 IGHG4P01861 327 aa10.99□□□□□ -0.65
C9orf3-202ENST00000297979 BATFQ16520 125 aa10.99□□□□□ -0.65
C9orf3-202ENST00000297979 LCNL1Q6ZST4 164 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 SIGLECL1Q8N7X8 197 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 OR4X2Q8NGF9 303 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 AAMDCQ9H7C9 122 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 OSTCQ9NRP0 149 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 PSG9Q00887 426 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 FOXL1Q12952 345 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 SGK494Q96LW2 274 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 GPR82Q96P67 336 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 ZNF702PQ9H963 129 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 ITPR3Q14573 2671 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 PDZD2O15018 2839 aa10.98□□□□□ -0.65
C9orf3-202ENST00000297979 GZMBP10144 247 aa10.97□□□□□ -0.65
C9orf3-202ENST00000297979 FABP4P15090 132 aa10.97□□□□□ -0.65
C9orf3-202ENST00000297979 PSMB8P28062 276 aa10.97□□□□□ -0.65
C9orf3-202ENST00000297979 FAM3BP58499 235 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-202ENST00000297979 JOSD1Q15040 202 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-202ENST00000297979 PDZD11Q5EBL8 140 aa10.97□□□□□ -0.65
C9orf3-202ENST00000297979 C1orf194Q5T5A4 169 aa10.97□□□□□ -0.65
C9orf3-202ENST00000297979 GOLT1AQ6ZVE7 132 aa10.97□□□□□ -0.65
C9orf3-202ENST00000297979 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
C9orf3-202ENST00000297979 SMAD5-AS1Q9Y6J3 95 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms