RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 A0A1W2PS18 150 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 IZUMO1RA6ND01 250 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 H3BTX0 84 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 UBE2CO00762 179 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 NDUFB4O95168 129 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 CD300EQ496F6 205 aaPredicted RBP11.43□□□□□ -0.58
CCDC140-201ENST00000295226 TCF24Q7RTU0 167 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 GBGT1Q8N5D6 347 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 STXBP6Q8NFX7 210 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 URGCP-MRPS24S4R325 110 aa11.43□□□□□ -0.58
CCDC140-201ENST00000295226 SORL1Q92673 2214 aa11.42□□□□□ -0.58
CCDC140-201ENST00000295226 C9JCJ5 164 aa11.42□□□□□ -0.58
CCDC140-201ENST00000295226 CXCL1P09341 107 aa11.42□□□□□ -0.58
CCDC140-201ENST00000295226 OR10J4P0C629 311 aa11.42□□□□□ -0.58
CCDC140-201ENST00000295226 KCNIP4Q6PIL6 250 aa11.42□□□□□ -0.58
CCDC140-201ENST00000295226 LINC01551Q86U37 167 aa11.42□□□□□ -0.58
CCDC140-201ENST00000295226 ZNF503Q96F45 646 aa11.42□□□□□ -0.58
CCDC140-201ENST00000295226 PYGO2Q9BRQ0 406 aa11.42□□□□□ -0.58
CCDC140-201ENST00000295226 TCEAL7Q9BRU2 100 aa11.42□□□□□ -0.58
CCDC140-201ENST00000295226 TGIF2-C20orf24A0A0A6YYL0 155 aa11.41□□□□□ -0.58
CCDC140-201ENST00000295226 A0A1W2PRE2 83 aa11.41□□□□□ -0.58
CCDC140-201ENST00000295226 OR7C2O60412 319 aa11.41□□□□□ -0.58
CCDC140-201ENST00000295226 S100A8P05109 93 aa11.41□□□□□ -0.58
CCDC140-201ENST00000295226 GALR1P47211 349 aa11.41□□□□□ -0.58
CCDC140-201ENST00000295226 OXLD1Q5BKU9 147 aa11.41□□□□□ -0.58
CCDC140-201ENST00000295226 C1orf194Q5T5A4 169 aa11.41□□□□□ -0.58
CCDC140-201ENST00000295226 SIGLEC15Q6ZMC9 328 aa11.41□□□□□ -0.58
CCDC140-201ENST00000295226 GRAMD2BQ96HH9 432 aa11.41□□□□□ -0.58
CCDC140-201ENST00000295226 C17orf77Q96MU5 243 aa11.41□□□□□ -0.58
CCDC140-201ENST00000295226 YTHDF2Q9Y5A9 579 aaKnown RBP11.41□□□□□ -0.58
CCDC140-201ENST00000295226 DNHD1Q96M86 4753 aa11.41□□□□□ -0.58
CCDC140-201ENST00000295226 MRPS12O15235 138 aaKnown RBP11.4□□□□□ -0.58
CCDC140-201ENST00000295226 PFN1P07737 140 aaKnown RBP11.4□□□□□ -0.58
CCDC140-201ENST00000295226 TFPI2P48307 235 aa11.4□□□□□ -0.58
CCDC140-201ENST00000295226 SNRPEP62304 92 aaKnown RBP11.4□□□□□ -0.58
CCDC140-201ENST00000295226 S100A7AQ86SG5 101 aa11.4□□□□□ -0.58
CCDC140-201ENST00000295226 WFDC3Q8IUB2 231 aa11.4□□□□□ -0.58
CCDC140-201ENST00000295226 TMEM61Q8N0U2 210 aa11.4□□□□□ -0.58
CCDC140-201ENST00000295226 SIGLEC8Q9NYZ4 499 aa11.4□□□□□ -0.58
CCDC140-201ENST00000295226 ZNF785A8K8V0 405 aa11.4□□□□□ -0.59
CCDC140-201ENST00000295226 GP9P14770 177 aa11.4□□□□□ -0.59
CCDC140-201ENST00000295226 AKR1D1P51857 326 aa11.4□□□□□ -0.59
CCDC140-201ENST00000295226 BPIFA4PQ86YQ2 179 aa11.4□□□□□ -0.59
CCDC140-201ENST00000295226 LINC00518Q8N0U6 118 aa11.4□□□□□ -0.59
CCDC140-201ENST00000295226 PAXXQ9BUH6 204 aa11.4□□□□□ -0.59
CCDC140-201ENST00000295226 OR51M1Q9H341 326 aa11.4□□□□□ -0.59
CCDC140-201ENST00000295226 SRD5A3Q9H8P0 318 aa11.4□□□□□ -0.59
CCDC140-201ENST00000295226 IGLV1-51P01701 117 aa11.39□□□□□ -0.59
CCDC140-201ENST00000295226 PRB4P10163 310 aaPredicted RBP11.39□□□□□ -0.59
CCDC140-201ENST00000295226 RPL7P18124 248 aaKnown RBP11.39□□□□□ -0.59
CCDC140-201ENST00000295226 S100A7P31151 101 aa11.39□□□□□ -0.59
CCDC140-201ENST00000295226 BMI1P35226 326 aa11.39□□□□□ -0.59
CCDC140-201ENST00000295226 PRR31Q5SQ13 230 aa11.39□□□□□ -0.59
CCDC140-201ENST00000295226 C9orf66Q5T8R8 295 aa11.39□□□□□ -0.59
CCDC140-201ENST00000295226 BLNKQ8WV28 456 aa11.39□□□□□ -0.59
CCDC140-201ENST00000295226 ZNF586Q9NXT0 402 aa11.39□□□□□ -0.59
CCDC140-201ENST00000295226 SCO2A0A1W2PP80 73 aa11.38□□□□□ -0.59
CCDC140-201ENST00000295226 IGFL4Q6B9Z1 124 aa11.38□□□□□ -0.59
CCDC140-201ENST00000295226 RBPMS2Q6ZRY4 209 aaKnown RBP11.38□□□□□ -0.59
CCDC140-201ENST00000295226 FXYD5Q96DB9 178 aa11.38□□□□□ -0.59
CCDC140-201ENST00000295226 MS4A6AQ9H2W1 248 aa11.38□□□□□ -0.59
CCDC140-201ENST00000295226 IGLC2P0DOY2 106 aa11.37□□□□□ -0.59
CCDC140-201ENST00000295226 FAM3BP58499 235 aaPredicted RBP11.37□□□□□ -0.59
CCDC140-201ENST00000295226 MCRIP2Q9BUT9 160 aaKnown RBP11.37□□□□□ -0.59
CCDC140-201ENST00000295226 TMEM14CQ9P0S9 112 aa11.37□□□□□ -0.59
CCDC140-201ENST00000295226 TRAV9-1A0A075B6T8 112 aa11.36□□□□□ -0.59
CCDC140-201ENST00000295226 HELTA6NFD8 242 aa11.36□□□□□ -0.59
CCDC140-201ENST00000295226 TYMSP04818 313 aa11.36□□□□□ -0.59
CCDC140-201ENST00000295226 RPL35P42766 123 aaKnown RBP11.36□□□□□ -0.59
CCDC140-201ENST00000295226 UBE2L3P68036 154 aaKnown RBP11.36□□□□□ -0.59
CCDC140-201ENST00000295226 FABP9Q0Z7S8 132 aa11.36□□□□□ -0.59
CCDC140-201ENST00000295226 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.36□□□□□ -0.59
CCDC140-201ENST00000295226 SFRP2Q96HF1 295 aa11.36□□□□□ -0.59
CCDC140-201ENST00000295226 G3V4G9 280 aa11.36□□□□□ -0.59
CCDC140-201ENST00000295226 SLC17A3O00476 420 aa11.36□□□□□ -0.59
CCDC140-201ENST00000295226 S100A9P06702 114 aaKnown RBP11.36□□□□□ -0.59
CCDC140-201ENST00000295226 NBEAP1P0C6P0 100 aa11.36□□□□□ -0.59
CCDC140-201ENST00000295226 HIST1H1EP10412 219 aaKnown RBP11.36□□□□□ -0.59
CCDC140-201ENST00000295226 GPR82Q96P67 336 aa11.36□□□□□ -0.59
CCDC140-201ENST00000295226 DERL1Q9BUN8 251 aa11.36□□□□□ -0.59
CCDC140-201ENST00000295226 TRGC2P03986 189 aa11.35□□□□□ -0.59
CCDC140-201ENST00000295226 HLA-DMBP28068 263 aa11.35□□□□□ -0.59
CCDC140-201ENST00000295226 OR10G8Q8NGN5 311 aa11.35□□□□□ -0.59
CCDC140-201ENST00000295226 NRN1Q9NPD7 142 aa11.35□□□□□ -0.59
CCDC140-201ENST00000295226 RNF24Q9Y225 148 aa11.35□□□□□ -0.59
CCDC140-201ENST00000295226 SMIM6P0DI80 62 aa11.34□□□□□ -0.59
CCDC140-201ENST00000295226 HOXA5P20719 270 aa11.34□□□□□ -0.59
CCDC140-201ENST00000295226 GNG4P50150 75 aa11.34□□□□□ -0.59
CCDC140-201ENST00000295226 INSL3P51460 131 aa11.34□□□□□ -0.59
CCDC140-201ENST00000295226 TAS2R60P59551 318 aa11.34□□□□□ -0.59
CCDC140-201ENST00000295226 DCANP1Q8TF63 244 aa11.34□□□□□ -0.59
CCDC140-201ENST00000295226 MGAM2Q2M2H8 2515 aa11.34□□□□□ -0.59
CCDC140-201ENST00000295226 TRBV20OR9-2A0A075B6H5 130 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 TRBV19A0A075B6N1 114 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 HIST1H2BKO60814 126 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 HIST1H2BJP06899 126 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 HIST1H2BOP23527 126 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 HIST1H2BBP33778 126 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 HIST1H2BDP58876 126 aa11.33□□□□□ -0.6
CCDC140-201ENST00000295226 HIST1H2BCP62807 126 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms