RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 CDKN1BP46527 198 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 PAQR4Q8N4S7 273 aaPredicted RBP10.02□□□□□ -0.81
SLX4-201ENST00000294008 ANKRD29Q8N6D5 301 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 WIPF2Q8TF74 440 aaPredicted RBP10.02□□□□□ -0.81
SLX4-201ENST00000294008 LYZL4Q96KX0 146 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 U3KQE9 123 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.02□□□□□ -0.81
SLX4-201ENST00000294008 LINC01551Q86U37 167 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 TJP1Q07157 1748 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 ARTNQ5T4W7 220 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 REG4Q9BYZ8 158 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 A0A0J9YWU9 116 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 IL18BPO95998 194 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 CT83Q5H943 113 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 TEX36Q5VZQ5 186 aa10.02□□□□□ -0.81
SLX4-201ENST00000294008 DDX60LQ5H9U9 1706 aaKnown RBP10.01□□□□□ -0.81
SLX4-201ENST00000294008 EP300Q09472 2414 aaPredicted RBP10.01□□□□□ -0.81
SLX4-201ENST00000294008 DOCK1Q14185 1865 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 IGFBP3P17936 291 aaPredicted RBP10.01□□□□□ -0.81
SLX4-201ENST00000294008 C8orf86Q6ZUL3 223 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 ORMDL1Q9P0S3 153 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 UBE2D1P51668 147 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 UTF1Q5T230 341 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 GAFA1Q96PS6 74 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 SDHAF1A6NFY7 115 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 CD59P13987 128 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 IFITM1P13164 125 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 HEPN1Q6WQI6 88 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 E7EQL1 145 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 MUSTN1Q8IVN3 82 aa10.01□□□□□ -0.81
SLX4-201ENST00000294008 SRSF3P84103 164 aaKnown RBP10□□□□□ -0.81
SLX4-201ENST00000294008 RHOHQ15669 191 aa10□□□□□ -0.81
SLX4-201ENST00000294008 NREPQ16612 68 aa10□□□□□ -0.81
SLX4-201ENST00000294008 C2orf66Q6UXQ4 117 aa10□□□□□ -0.81
SLX4-201ENST00000294008 C5orf24Q7Z6I8 188 aa10□□□□□ -0.81
SLX4-201ENST00000294008 B9D2Q9BPU9 175 aa10□□□□□ -0.81
SLX4-201ENST00000294008 AMTNQ6UX39 209 aa10□□□□□ -0.81
SLX4-201ENST00000294008 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
SLX4-201ENST00000294008 POLEQ07864 2286 aa10□□□□□ -0.81
SLX4-201ENST00000294008 TDRD15B5MCY1 1934 aaKnown RBP10□□□□□ -0.81
SLX4-201ENST00000294008 PKD1L3Q7Z443 1732 aa10□□□□□ -0.81
SLX4-201ENST00000294008 GATA3P23771 443 aa10□□□□□ -0.81
SLX4-201ENST00000294008 ZFP36P26651 326 aaKnown RBP10□□□□□ -0.81
SLX4-201ENST00000294008 HERV-K104P63124 156 aa10□□□□□ -0.81
SLX4-201ENST00000294008 LINC01590Q5TEZ4 76 aa10□□□□□ -0.81
SLX4-201ENST00000294008 LYPD6BQ8NI32 183 aa10□□□□□ -0.81
SLX4-201ENST00000294008 OOSP1A8MZH6 123 aa9.99□□□□□ -0.81
SLX4-201ENST00000294008 GREM1O60565 184 aa9.99□□□□□ -0.81
SLX4-201ENST00000294008 PLCH1Q4KWH8 1693 aa9.99□□□□□ -0.81
SLX4-201ENST00000294008 NRAPQ86VF7 1730 aa9.99□□□□□ -0.81
SLX4-201ENST00000294008 PFN1P07737 140 aaKnown RBP9.99□□□□□ -0.81
SLX4-201ENST00000294008 WDR86Q86TI4 376 aa9.99□□□□□ -0.81
SLX4-201ENST00000294008 TMEM141Q96I45 108 aa9.99□□□□□ -0.81
SLX4-201ENST00000294008 IGKV1-6A0A0C4DH72 117 aa9.99□□□□□ -0.81
SLX4-201ENST00000294008 LINC00479Q96M42 142 aa9.99□□□□□ -0.81
SLX4-201ENST00000294008 A0A1B0GW64 132 aa9.99□□□□□ -0.81
SLX4-201ENST00000294008 HERVK_113P63121 156 aa9.99□□□□□ -0.81
SLX4-201ENST00000294008 MCM3APO60318 1980 aa9.99□□□□□ -0.81
SLX4-201ENST00000294008 FAM120AOSQ5T036 256 aa9.98□□□□□ -0.81
SLX4-201ENST00000294008 NDUFB8O95169 186 aa9.98□□□□□ -0.81
SLX4-201ENST00000294008 SPART-AS1P0CW21 52 aa9.98□□□□□ -0.81
SLX4-201ENST00000294008 SLAQ13239 276 aa9.98□□□□□ -0.81
SLX4-201ENST00000294008 MESP1Q9BRJ9 268 aa9.98□□□□□ -0.81
SLX4-201ENST00000294008 AGMATQ9BSE5 352 aa9.98□□□□□ -0.81
SLX4-201ENST00000294008 TMEM14BQ9NUH8 114 aa9.98□□□□□ -0.81
SLX4-201ENST00000294008 IGKV3D-7A0A0C4DH55 119 aa9.98□□□□□ -0.81
SLX4-201ENST00000294008 CEP250Q9BV73 2442 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 SYS1-DBNDD2H3BUS1 97 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 HIST2H2BCQ6DN03 193 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 HRCT1Q6UXD1 115 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 SPRY2O43597 315 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 DYNAPQ8N1N2 210 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 GLRX5Q86SX6 157 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 SLURP1P55000 103 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 ZFP36L1Q07352 338 aaKnown RBP9.97□□□□□ -0.81
SLX4-201ENST00000294008 WFDC1Q9HC57 220 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 IGLV3-9A0A075B6K5 115 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 A0A087WWC5 75 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 HGFACQ04756 655 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 LINC01559Q495D7 138 aa9.97□□□□□ -0.81
SLX4-201ENST00000294008 ALPK2Q86TB3 2170 aa9.96□□□□□ -0.81
SLX4-201ENST00000294008 SHANK3Q9BYB0 1731 aa9.96□□□□□ -0.81
SLX4-201ENST00000294008 BAALC-AS2P0C853 105 aa9.96□□□□□ -0.81
SLX4-201ENST00000294008 NHLRC3Q5JS37 347 aa9.96□□□□□ -0.81
SLX4-201ENST00000294008 EIF4EBP2Q13542 120 aaPredicted RBP9.96□□□□□ -0.81
SLX4-201ENST00000294008 LTAP01374 205 aa9.96□□□□□ -0.82
SLX4-201ENST00000294008 LINC00271P0C7V0 271 aa9.96□□□□□ -0.82
SLX4-201ENST00000294008 SMIM10L1P0DMW3 83 aa9.96□□□□□ -0.82
SLX4-201ENST00000294008 SMIM10Q96HG1 83 aa9.96□□□□□ -0.82
SLX4-201ENST00000294008 ABCA1O95477 2261 aa9.96□□□□□ -0.82
SLX4-201ENST00000294008 ZNF362Q5T0B9 420 aaPredicted RBP9.96□□□□□ -0.82
SLX4-201ENST00000294008 Q9H8V8 135 aa9.96□□□□□ -0.82
SLX4-201ENST00000294008 ZC2HC1AQ96GY0 325 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 ALS2Q96Q42 1657 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
SLX4-201ENST00000294008 ASPHD1Q5U4P2 390 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 GFI1Q99684 422 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 IGHV4-30-2A0A087WSY4 118 aa9.95□□□□□ -0.82
SLX4-201ENST00000294008 NPSP0C0P6 89 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms