RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ATP5G3P48201 142 aa17.67■□□□□ 0.42
U2AF1-201ENST00000291552 TMEM263Q8WUH6 116 aaKnown RBP17.67■□□□□ 0.42
U2AF1-201ENST00000291552 NOP10Q9NPE3 64 aaKnown RBP17.67■□□□□ 0.42
U2AF1-201ENST00000291552 LYRM2Q9NU23 88 aaPredicted RBP17.67■□□□□ 0.42
U2AF1-201ENST00000291552 TIMM8BQ9Y5J9 83 aaPredicted RBP17.67■□□□□ 0.42
U2AF1-201ENST00000291552 PXMP4Q9Y6I8 212 aa17.67■□□□□ 0.42
U2AF1-201ENST00000291552 UBE2L5PA0A1B0GUS4 154 aa17.66■□□□□ 0.42
U2AF1-201ENST00000291552 H7BYZ3 331 aa17.66■□□□□ 0.42
U2AF1-201ENST00000291552 H2AFB2P0C5Z0 115 aa17.66■□□□□ 0.42
U2AF1-201ENST00000291552 S100A10P60903 97 aa17.66■□□□□ 0.42
U2AF1-201ENST00000291552 RAB32Q13637 225 aa17.66■□□□□ 0.42
U2AF1-201ENST00000291552 ZNF493Q6ZR52 646 aa17.66■□□□□ 0.42
U2AF1-201ENST00000291552 OR10J6PQ8NGY7 276 aa17.66■□□□□ 0.42
U2AF1-201ENST00000291552 CCDC32Q9BV29 185 aa17.66■□□□□ 0.42
U2AF1-201ENST00000291552 ZNF586Q9NXT0 402 aa17.66■□□□□ 0.42
U2AF1-201ENST00000291552 NDUFA13Q9P0J0 144 aa17.66■□□□□ 0.42
U2AF1-201ENST00000291552 ABCA13Q86UQ4 5058 aa17.66■□□□□ 0.42
U2AF1-201ENST00000291552 SULT1A1P50225 295 aa17.65■□□□□ 0.42
U2AF1-201ENST00000291552 FAM3BP58499 235 aaPredicted RBP17.65■□□□□ 0.42
U2AF1-201ENST00000291552 RAB31Q13636 194 aa17.65■□□□□ 0.42
U2AF1-201ENST00000291552 TMEM252Q8N6L7 170 aa17.65■□□□□ 0.42
U2AF1-201ENST00000291552 C20orf144Q9BQM9 153 aa17.65■□□□□ 0.42
U2AF1-201ENST00000291552 SLC39A9Q9NUM3 307 aa17.65■□□□□ 0.42
U2AF1-201ENST00000291552 NUDT3O95989 172 aa17.64■□□□□ 0.41
U2AF1-201ENST00000291552 CT45A10P0DMU9 189 aa17.64■□□□□ 0.41
U2AF1-201ENST00000291552 RPL29P47914 159 aaKnown RBP17.64■□□□□ 0.41
U2AF1-201ENST00000291552 Q6ZRG5 221 aa17.64■□□□□ 0.41
U2AF1-201ENST00000291552 LINC00612Q8N6U2 182 aa17.64■□□□□ 0.41
U2AF1-201ENST00000291552 ZNRF2Q8NHG8 242 aa17.64■□□□□ 0.41
U2AF1-201ENST00000291552 RNF141Q8WVD5 230 aa17.64■□□□□ 0.41
U2AF1-201ENST00000291552 NPIPB6E9PJ23 425 aa17.63■□□□□ 0.41
U2AF1-201ENST00000291552 BAXQ07812 192 aa17.63■□□□□ 0.41
U2AF1-201ENST00000291552 C1orf134Q5TEV5 83 aa17.63■□□□□ 0.41
U2AF1-201ENST00000291552 OR1L4Q8NGR5 311 aa17.63■□□□□ 0.41
U2AF1-201ENST00000291552 ATG101Q9BSB4 218 aa17.63■□□□□ 0.41
U2AF1-201ENST00000291552 PVALBP20472 110 aaPredicted RBP17.62■□□□□ 0.41
U2AF1-201ENST00000291552 GUK1Q16774 197 aa17.62■□□□□ 0.41
U2AF1-201ENST00000291552 CHAC2Q8WUX2 184 aa17.62■□□□□ 0.41
U2AF1-201ENST00000291552 ODF3Q96PU9 254 aa17.62■□□□□ 0.41
U2AF1-201ENST00000291552 PFDN5Q99471 154 aa17.62■□□□□ 0.41
U2AF1-201ENST00000291552 LRP1BQ9NZR2 4599 aa17.62■□□□□ 0.41
U2AF1-201ENST00000291552 HSPG2P98160 4391 aa17.61■□□□□ 0.41
U2AF1-201ENST00000291552 J3KRW8 73 aa17.61■□□□□ 0.41
U2AF1-201ENST00000291552 MED14OSP0DP75 135 aa17.61■□□□□ 0.41
U2AF1-201ENST00000291552 S100A11P31949 105 aa17.61■□□□□ 0.41
U2AF1-201ENST00000291552 LINC00588Q9Y4M8 146 aa17.61■□□□□ 0.41
U2AF1-201ENST00000291552 FAM240BA0A1B0GVZ2 78 aa17.6■□□□□ 0.41
U2AF1-201ENST00000291552 M0R3E3 92 aa17.6■□□□□ 0.41
U2AF1-201ENST00000291552 ZNF253O75346 499 aa17.6■□□□□ 0.41
U2AF1-201ENST00000291552 NDUFB4O95168 129 aa17.6■□□□□ 0.41
U2AF1-201ENST00000291552 FGF7P21781 194 aa17.6■□□□□ 0.41
U2AF1-201ENST00000291552 STX12Q86Y82 276 aa17.6■□□□□ 0.41
U2AF1-201ENST00000291552 TRBV19A0A075B6N1 114 aa17.59■□□□□ 0.41
U2AF1-201ENST00000291552 GCSAMLQ5JQS6 135 aa17.59■□□□□ 0.41
U2AF1-201ENST00000291552 SOHLH1Q5JUK2 328 aa17.59■□□□□ 0.41
U2AF1-201ENST00000291552 ZNF575Q86XF7 245 aa17.59■□□□□ 0.41
U2AF1-201ENST00000291552 TRAV12-3A0A0B4J271 114 aa17.58■□□□□ 0.4
U2AF1-201ENST00000291552 NBDYA0A0U1RRE5 68 aa17.58■□□□□ 0.4
U2AF1-201ENST00000291552 PYYP10082 97 aa17.58■□□□□ 0.4
U2AF1-201ENST00000291552 LEPP41159 167 aa17.58■□□□□ 0.4
U2AF1-201ENST00000291552 HBG1P69891 147 aa17.58■□□□□ 0.4
U2AF1-201ENST00000291552 HBG2P69892 147 aa17.58■□□□□ 0.4
U2AF1-201ENST00000291552 ASAH1Q13510 395 aa17.58■□□□□ 0.4
U2AF1-201ENST00000291552 GPN1Q9HCN4 374 aaPredicted RBP17.58■□□□□ 0.4
U2AF1-201ENST00000291552 TMEM14CQ9P0S9 112 aa17.58■□□□□ 0.4
U2AF1-201ENST00000291552 HOXA5P20719 270 aa17.57■□□□□ 0.4
U2AF1-201ENST00000291552 ERCC8Q13216 396 aa17.57■□□□□ 0.4
U2AF1-201ENST00000291552 MRPL53Q96EL3 112 aaKnown RBP17.57■□□□□ 0.4
U2AF1-201ENST00000291552 NPCDR1Q9BY65 106 aa17.57■□□□□ 0.4
U2AF1-201ENST00000291552 ATP6V1FQ16864 119 aa17.56■□□□□ 0.4
U2AF1-201ENST00000291552 GAGE12BA1L429 117 aa17.55■□□□□ 0.4
U2AF1-201ENST00000291552 GAGE7O76087 117 aa17.55■□□□□ 0.4
U2AF1-201ENST00000291552 SIX6O95475 246 aa17.55■□□□□ 0.4
U2AF1-201ENST00000291552 GAGE12FP0CL80 117 aa17.55■□□□□ 0.4
U2AF1-201ENST00000291552 GAGE12GP0CL81 117 aa17.55■□□□□ 0.4
U2AF1-201ENST00000291552 GAGE12IP0CL82 117 aa17.55■□□□□ 0.4
U2AF1-201ENST00000291552 HIST1H1EP10412 219 aaKnown RBP17.55■□□□□ 0.4
U2AF1-201ENST00000291552 NHLH2Q02577 135 aa17.55■□□□□ 0.4
U2AF1-201ENST00000291552 TNP2Q05952 138 aa17.55■□□□□ 0.4
U2AF1-201ENST00000291552 CCDC28AQ8IWP9 274 aa17.55■□□□□ 0.4
U2AF1-201ENST00000291552 FAM19A4Q96LR4 140 aa17.55■□□□□ 0.4
U2AF1-201ENST00000291552 TRAV26-1A0A087WT03 109 aa17.54■□□□□ 0.4
U2AF1-201ENST00000291552 CCL18P55774 89 aa17.54■□□□□ 0.4
U2AF1-201ENST00000291552 MZT2BQ6NZ67 158 aa17.54■□□□□ 0.4
U2AF1-201ENST00000291552 LINC00299Q6ZSB3 139 aa17.54■□□□□ 0.4
U2AF1-201ENST00000291552 FAM167A-AS1Q96KT0 104 aa17.54■□□□□ 0.4
U2AF1-201ENST00000291552 SLC25A2Q9BXI2 301 aa17.54■□□□□ 0.4
U2AF1-201ENST00000291552 KLLNB2CW77 178 aa17.53■□□□□ 0.4
U2AF1-201ENST00000291552 MPDU1O75352 247 aa17.53■□□□□ 0.4
U2AF1-201ENST00000291552 OR5I1Q13606 314 aa17.53■□□□□ 0.4
U2AF1-201ENST00000291552 PDE6HQ13956 83 aa17.53■□□□□ 0.4
U2AF1-201ENST00000291552 Q6ZTI0 123 aa17.53■□□□□ 0.4
U2AF1-201ENST00000291552 SSX7Q7RTT5 188 aa17.53■□□□□ 0.4
U2AF1-201ENST00000291552 EXOC3-AS1Q8N2X6 119 aa17.53■□□□□ 0.4
U2AF1-201ENST00000291552 THAP6Q8TBB0 222 aa17.53■□□□□ 0.4
U2AF1-201ENST00000291552 PYGO2Q9BRQ0 406 aa17.53■□□□□ 0.4
U2AF1-201ENST00000291552 A0A0J9YY99 117 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 C7orf71A4D174 169 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 SNURFLB1AK76 121 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 H0YIZ8 118 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms