RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 MBD3L2Q8NHZ7 208 aaPredicted RBP10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 SLC25A2Q9BXI2 301 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 Q9UFV3 132 aa10.16□□□□□ -0.78
SLC6A1-201ENST00000287766 B9A039 149 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 H3BMG7 143 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 TNFRSF6BO95407 300 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 IGLV2-14P01704 120 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 RNF125Q96EQ8 232 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 H3BRM9 83 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 YPEL3P61236 119 aaPredicted RBP10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 PRR30Q53SZ7 412 aaPredicted RBP10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 C2orf82Q6UX34 121 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 ODF3L1Q8IXM7 274 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 RCHY1Q96PM5 261 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 FAM90A9PA6NNJ1 464 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 RNASE2P10153 161 aaKnown RBP10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 C17orf58Q2M2W7 97 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 DYNLRB2Q8TF09 96 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 TNFRSF18Q9Y5U5 241 aa10.15□□□□□ -0.78
SLC6A1-201ENST00000287766 CSPG4Q6UVK1 2322 aa10.15□□□□□ -0.79
SLC6A1-201ENST00000287766 SRRM4A7MD48 611 aaKnown RBP10.15□□□□□ -0.79
SLC6A1-201ENST00000287766 H0YJW9 148 aa10.15□□□□□ -0.79
SLC6A1-201ENST00000287766 LY96Q9Y6Y9 160 aa10.15□□□□□ -0.79
SLC6A1-201ENST00000287766 B5MCH6 92 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 C10orf142B7Z368 130 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 TMEM158Q8WZ71 300 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 SMPXQ9UHP9 88 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 IGHV2-26A0A0B4J1V2 119 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 NUPR1O60356 82 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 BVES-AS1Q5T3Y7 98 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 TMEM178BH3BS89 294 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 K7EM74 188 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 TIMM23O14925 209 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 TMEM30BQ3MIR4 351 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 DPM3Q9P2X0 92 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 ARMS2P0C7Q2 107 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 ORMDL2Q53FV1 153 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 RNF182Q8N6D2 247 aa10.14□□□□□ -0.79
SLC6A1-201ENST00000287766 TRAV40A0A0B4J280 105 aa10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 CEP192Q8TEP8 1941 aa10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 NCOR2Q9Y618 2525 aa10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 IGKV2-40A0A087WW87 121 aaPredicted RBP10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 KIR2DL5BA0A0G2JN68 375 aa10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 KIR2DL5BA0A0G2JPC4 375 aa10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 IGKV2D-40P01614 121 aaPredicted RBP10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 HIST1H4AP62805 103 aaKnown RBP10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 KIR2DL5AQ8N109 375 aa10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 ZNF48Q96MX3 618 aaPredicted RBP10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 TRANK1O15050 2925 aa10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 CNTFRP26992 372 aa10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 RNASE4P34096 147 aaKnown RBP10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 KLRD1Q13241 179 aa10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 Q8TAT8 98 aa10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 TPSG1Q9NRR2 321 aa10.13□□□□□ -0.79
SLC6A1-201ENST00000287766 DSCAML1Q8TD84 2053 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 K7EP34 96 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 ATXN8Q156A1 80 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 ARPC1AQ92747 370 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 TMEM14BQ9NUH8 114 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 KLF12Q9Y4X4 402 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 LRP4O75096 1905 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 IGHV1-8P0DP01 117 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 LAGE3Q14657 143 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 PLA2G2CQ5R387 149 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 M0R2P5 195 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 IGFBPL1Q8WX77 278 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 CSTL1Q9H114 145 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 C11orf1Q9H5F2 150 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 FAM215AQ9Y5M1 114 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 SZT2Q5T011 3432 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 LY6EQ16553 131 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 C9orf153Q5TBE3 101 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 Q6ZS92 163 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 SPACA3Q8IXA5 215 aa10.12□□□□□ -0.79
SLC6A1-201ENST00000287766 UTF1Q5T230 341 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 CLEC19AQ6UXS0 136 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 ZNF295-AS1Q8N0V1 137 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 ZC2HC1AQ96GY0 325 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 SS18L2Q9UHA2 77 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 TRAV8-3A0A0A6YYJ7 113 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 K7ERJ3 54 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 NPFFO15130 113 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 ATP5G2Q06055 141 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 TRAV21A0A0B4J279 112 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 A0A1W2PPI3 338 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 CFHR2P36980 270 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 MSMPQ1L6U9 139 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 TANC2Q9HCD6 1990 aa10.11□□□□□ -0.79
SLC6A1-201ENST00000287766 IGHV2-70DA0A0C4DH43 119 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 TEX48A0A1B0GUV7 120 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 LINC01549A6NIU2 74 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 IGLV1-44P01699 117 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 IGFL4Q6B9Z1 124 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 C8orf46Q8TAG6 207 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 A0A1W2PPM0 123 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 CD7P09564 240 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 LINC00527Q9UJ94 153 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 SPRY4Q9C004 299 aa10.1□□□□□ -0.79
SLC6A1-201ENST00000287766 TRBV20-1A0A075B6N2 111 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms