RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 FAM210AQ96ND0 272 aa16.21■□□□□ 0.19
PDLIM3-203ENST00000284771 ARL2-SNX15V9GYD0 113 aa16.21■□□□□ 0.19
PDLIM3-203ENST00000284771 DEFB131AP59861 70 aa16.21■□□□□ 0.18
PDLIM3-203ENST00000284771 RBFOX3A6NFN3 312 aa16.2■□□□□ 0.18
PDLIM3-203ENST00000284771 F6UB75 175 aa16.2■□□□□ 0.18
PDLIM3-203ENST00000284771 GNG5P63218 68 aa16.2■□□□□ 0.18
PDLIM3-203ENST00000284771 APRG1Q8IVJ8 170 aa16.2■□□□□ 0.18
PDLIM3-203ENST00000284771 WFDC10AQ9H1F0 79 aa16.2■□□□□ 0.18
PDLIM3-203ENST00000284771 LOC102723971A0A1B0GUV8 181 aa16.19■□□□□ 0.18
PDLIM3-203ENST00000284771 C11orf94C9JXX5 98 aa16.19■□□□□ 0.18
PDLIM3-203ENST00000284771 CD81P60033 236 aa16.19■□□□□ 0.18
PDLIM3-203ENST00000284771 SRSF3P84103 164 aaKnown RBP16.19■□□□□ 0.18
PDLIM3-203ENST00000284771 GDF5OSQ5U4N7 250 aa16.19■□□□□ 0.18
PDLIM3-203ENST00000284771 TOR2AQ5JU69 321 aa16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 Q8N1Y9 231 aa16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 RPUSD4Q96CM3 377 aaKnown RBP16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 PRR25Q96S07 402 aa16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 NKX6-2Q9C056 277 aaPredicted RBP16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 CLEC5AQ9NY25 188 aa16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 IFNA1P01562 189 aa16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 SLC25A5P05141 298 aaKnown RBP16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 ZNF705DP0CH99 300 aaPredicted RBP16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 ZNF705BP0CI00 300 aaPredicted RBP16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 MEF2BQ02080 365 aaPredicted RBP16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 ZNF506Q5JVG8 444 aa16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 ZNF738Q8NE65 137 aa16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 RXFP4Q8TDU9 374 aa16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 VAX2Q9UIW0 290 aa16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 EPDR1Q9UM22 224 aa16.18■□□□□ 0.18
PDLIM3-203ENST00000284771 C5orf17Q8NAS9 161 aa16.17■□□□□ 0.18
PDLIM3-203ENST00000284771 MRPL53Q96EL3 112 aaKnown RBP16.17■□□□□ 0.18
PDLIM3-203ENST00000284771 CITED4Q96RK1 184 aa16.17■□□□□ 0.18
PDLIM3-203ENST00000284771 FAM110AQ9BQ89 295 aa16.17■□□□□ 0.18
PDLIM3-203ENST00000284771 PRELID1Q9Y255 219 aa16.17■□□□□ 0.18
PDLIM3-203ENST00000284771 DNAH3Q8TD57 4116 aa16.16■□□□□ 0.18
PDLIM3-203ENST00000284771 OR11H12B2RN74 326 aa16.16■□□□□ 0.18
PDLIM3-203ENST00000284771 DIRC3C9JPN6 131 aa16.16■□□□□ 0.18
PDLIM3-203ENST00000284771 EIF5A2Q9GZV4 153 aaKnown RBP16.16■□□□□ 0.18
PDLIM3-203ENST00000284771 C9JQL5 133 aa16.15■□□□□ 0.18
PDLIM3-203ENST00000284771 TCRAP04437 139 aa16.15■□□□□ 0.18
PDLIM3-203ENST00000284771 CMTM2Q8TAZ6 248 aa16.15■□□□□ 0.18
PDLIM3-203ENST00000284771 RPH3ALQ9UNE2 315 aa16.15■□□□□ 0.18
PDLIM3-203ENST00000284771 IGKV2-40A0A087WW87 121 aaPredicted RBP16.14■□□□□ 0.18
PDLIM3-203ENST00000284771 KNCNA6PVL3 124 aa16.14■□□□□ 0.18
PDLIM3-203ENST00000284771 IGKV2D-40P01614 121 aaPredicted RBP16.14■□□□□ 0.18
PDLIM3-203ENST00000284771 GTSCR1Q86UQ5 136 aa16.14■□□□□ 0.18
PDLIM3-203ENST00000284771 LINC00479Q96M42 142 aa16.14■□□□□ 0.18
PDLIM3-203ENST00000284771 SCO2A0A1W2PP80 73 aa16.14■□□□□ 0.17
PDLIM3-203ENST00000284771 KPRPQ5T749 579 aaPredicted RBP16.14■□□□□ 0.17
PDLIM3-203ENST00000284771 DEFB125Q8N687 156 aa16.14■□□□□ 0.17
PDLIM3-203ENST00000284771 TXNDC17Q9BRA2 123 aa16.14■□□□□ 0.17
PDLIM3-203ENST00000284771 SAV1Q9H4B6 383 aaPredicted RBP16.14■□□□□ 0.17
PDLIM3-203ENST00000284771 A0A0J9YX75 114 aa16.13■□□□□ 0.17
PDLIM3-203ENST00000284771 LINC00862A6NCI5 91 aa16.13■□□□□ 0.17
PDLIM3-203ENST00000284771 TAGLN2P37802 199 aaKnown RBP16.13■□□□□ 0.17
PDLIM3-203ENST00000284771 GOLT1AQ6ZVE7 132 aa16.13■□□□□ 0.17
PDLIM3-203ENST00000284771 ARL6IP6Q8N6S5 226 aa16.13■□□□□ 0.17
PDLIM3-203ENST00000284771 OR8A1Q8NGG7 326 aa16.13■□□□□ 0.17
PDLIM3-203ENST00000284771 VGLL1Q99990 258 aa16.13■□□□□ 0.17
PDLIM3-203ENST00000284771 MED9Q9NWA0 146 aa16.13■□□□□ 0.17
PDLIM3-203ENST00000284771 TRAV8-1A0A0A6YYK1 113 aa16.12■□□□□ 0.17
PDLIM3-203ENST00000284771 CSN1S1P47710 185 aa16.12■□□□□ 0.17
PDLIM3-203ENST00000284771 SGK494Q96LW2 274 aa16.12■□□□□ 0.17
PDLIM3-203ENST00000284771 PEX7O00628 323 aa16.11■□□□□ 0.17
PDLIM3-203ENST00000284771 CMC4P56277 68 aaPredicted RBP16.11■□□□□ 0.17
PDLIM3-203ENST00000284771 ERCC8Q13216 396 aa16.11■□□□□ 0.17
PDLIM3-203ENST00000284771 ACTL10Q5JWF8 245 aa16.11■□□□□ 0.17
PDLIM3-203ENST00000284771 FOXI2Q6ZQN5 318 aa16.11■□□□□ 0.17
PDLIM3-203ENST00000284771 HIST1H2BAQ96A08 127 aa16.11■□□□□ 0.17
PDLIM3-203ENST00000284771 ATG101Q9BSB4 218 aa16.11■□□□□ 0.17
PDLIM3-203ENST00000284771 IGLV2-11P01706 119 aa16.11■□□□□ 0.17
PDLIM3-203ENST00000284771 PRB2P02812 416 aaPredicted RBP16.11■□□□□ 0.17
PDLIM3-203ENST00000284771 C2CD4CQ8TF44 421 aa16.11■□□□□ 0.17
PDLIM3-203ENST00000284771 AGPAT4-IT1Q9H0P7 198 aa16.11■□□□□ 0.17
PDLIM3-203ENST00000284771 TRAV34A0A0B4J273 112 aa16.1■□□□□ 0.17
PDLIM3-203ENST00000284771 RAB19A4D1S5 217 aa16.1■□□□□ 0.17
PDLIM3-203ENST00000284771 H3BMM0 161 aa16.1■□□□□ 0.17
PDLIM3-203ENST00000284771 CNN1P51911 297 aaKnown RBP16.1■□□□□ 0.17
PDLIM3-203ENST00000284771 HIST1H1AQ02539 215 aaPredicted RBP16.1■□□□□ 0.17
PDLIM3-203ENST00000284771 CYB561D1Q8N8Q1 229 aa16.1■□□□□ 0.17
PDLIM3-203ENST00000284771 C11orf52Q96A22 123 aa16.1■□□□□ 0.17
PDLIM3-203ENST00000284771 ASCL2Q99929 193 aa16.1■□□□□ 0.17
PDLIM3-203ENST00000284771 DERL1Q9BUN8 251 aa16.1■□□□□ 0.17
PDLIM3-203ENST00000284771 ZMAT5Q9UDW3 170 aaKnown RBP16.1■□□□□ 0.17
PDLIM3-203ENST00000284771 PDE6DO43924 150 aa16.09■□□□□ 0.17
PDLIM3-203ENST00000284771 SRP19P09132 144 aaKnown RBP16.09■□□□□ 0.17
PDLIM3-203ENST00000284771 HLA-DRB4P13762 266 aa16.09■□□□□ 0.17
PDLIM3-203ENST00000284771 TCEAL7Q9BRU2 100 aa16.09■□□□□ 0.17
PDLIM3-203ENST00000284771 HLA-DRB4X5D2U9 266 aa16.09■□□□□ 0.17
PDLIM3-203ENST00000284771 RBAKDNA6NC62 111 aa16.08■□□□□ 0.17
PDLIM3-203ENST00000284771 EBLN2Q6P2I7 272 aa16.08■□□□□ 0.17
PDLIM3-203ENST00000284771 C9orf47Q6ZRZ4 202 aa16.08■□□□□ 0.17
PDLIM3-203ENST00000284771 COMMD7Q86VX2 200 aa16.08■□□□□ 0.17
PDLIM3-203ENST00000284771 NPIPB6E9PJ23 425 aa16.08■□□□□ 0.16
PDLIM3-203ENST00000284771 IGKV3-20P01619 116 aa16.08■□□□□ 0.16
PDLIM3-203ENST00000284771 KLF12Q9Y4X4 402 aa16.08■□□□□ 0.16
PDLIM3-203ENST00000284771 RBMY1BA6NDE4 496 aaKnown RBP16.07■□□□□ 0.16
PDLIM3-203ENST00000284771 RBMY1EA6NEQ0 496 aaKnown RBP16.07■□□□□ 0.16
PDLIM3-203ENST00000284771 F6UZH7 168 aa16.07■□□□□ 0.16
PDLIM3-203ENST00000284771 RBMY1DP0C7P1 496 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms