RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 FLYWCH2Q96CP2 140 aaKnown RBP8.18□□□□□ -1.1
UPF3B-201ENST00000276201 MRPL20Q9BYC9 149 aaKnown RBP8.18□□□□□ -1.1
UPF3B-201ENST00000276201 RNF24Q9Y225 148 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 U3KQK5 164 aa8.18□□□□□ -1.1
UPF3B-201ENST00000276201 A0A096LNT2 108 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 A0A1B0GUT8 65 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 C17orf100A8MU93 164 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 SMIM17P0DL12 118 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 HTR1DP28221 377 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 HSD52Q0P140 79 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 FER1L6-AS1Q8NA97 138 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 MAPK1IP1LQ8NDC0 245 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 OR4X2Q8NGF9 303 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 TMEM186Q96B77 213 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 SMR3AQ99954 134 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 Q9H3A6 140 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 AP5S1Q9NUS5 200 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 CHTOPQ9Y3Y2 248 aaKnown RBP8.17□□□□□ -1.1
UPF3B-201ENST00000276201 CR1P17927 2039 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 GAGE10A6NGK3 116 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 LYNX1G3V0Z9 82 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 G3V4G9 280 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 K7EP34 96 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 LYNX1P0DP58 116 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 SPRNQ5BIV9 151 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 OR5A1Q8NGJ0 315 aa8.17□□□□□ -1.1
UPF3B-201ENST00000276201 A0A087X0K7 114 aa8.16□□□□□ -1.1
UPF3B-201ENST00000276201 IGLV2-11P01706 119 aa8.16□□□□□ -1.1
UPF3B-201ENST00000276201 IGHV1-46P01743 117 aa8.16□□□□□ -1.1
UPF3B-201ENST00000276201 NEGR1Q7Z3B1 354 aa8.16□□□□□ -1.1
UPF3B-201ENST00000276201 TMEM75Q8N9X5 138 aa8.16□□□□□ -1.1
UPF3B-201ENST00000276201 CSPG4Q6UVK1 2322 aa8.16□□□□□ -1.1
UPF3B-201ENST00000276201 TLN2Q9Y4G6 2542 aa8.16□□□□□ -1.1
UPF3B-201ENST00000276201 SPRY3O43610 288 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 CT45A10P0DMU9 189 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 SLC25A16P16260 332 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 CCL8P80075 99 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 VMA21Q3ZAQ7 101 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 LYPD1Q8N2G4 141 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 MRPL36Q9P0J6 103 aaKnown RBP8.15□□□□□ -1.1
UPF3B-201ENST00000276201 E7EUB6 86 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 NDUFS8O00217 210 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 MC5RP33032 325 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 LGALS7P47929 136 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 MRGPRG-AS1Q2M3A8 158 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 ASPHD1Q5U4P2 390 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 PIMREGQ9BSJ6 248 aa8.15□□□□□ -1.1
UPF3B-201ENST00000276201 LY6G6DO95868 133 aa8.14□□□□□ -1.11
UPF3B-201ENST00000276201 KRTAP1-1Q07627 177 aa8.14□□□□□ -1.11
UPF3B-201ENST00000276201 FA2HQ7L5A8 372 aa8.14□□□□□ -1.11
UPF3B-201ENST00000276201 BPESC1Q9GZL8 116 aa8.14□□□□□ -1.11
UPF3B-201ENST00000276201 TP73-AS1Q9UF72 201 aa8.14□□□□□ -1.11
UPF3B-201ENST00000276201 A0A1W2PPI3 338 aa8.14□□□□□ -1.11
UPF3B-201ENST00000276201 TMEM238C9JI98 176 aa8.14□□□□□ -1.11
UPF3B-201ENST00000276201 TNFAIP6P98066 277 aaPredicted RBP8.14□□□□□ -1.11
UPF3B-201ENST00000276201 OR1B1Q8NGR6 318 aa8.14□□□□□ -1.11
UPF3B-201ENST00000276201 BLNKQ8WV28 456 aa8.14□□□□□ -1.11
UPF3B-201ENST00000276201 MEGF9Q9H1U4 602 aa8.14□□□□□ -1.11
UPF3B-201ENST00000276201 IGHV4-61A0A0C4DH41 118 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 ZNF785A8K8V0 405 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 LOXL1Q08397 574 aaPredicted RBP8.13□□□□□ -1.11
UPF3B-201ENST00000276201 LINC01559Q495D7 138 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 DUX4L9Q6RFH8 374 aaPredicted RBP8.13□□□□□ -1.11
UPF3B-201ENST00000276201 COX8CQ7Z4L0 72 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 CCL13Q99616 98 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 HIGD1AQ9Y241 93 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 A0A096LNJ9 63 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 LINC01546A6NGU7 62 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 CRYGBP07316 175 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 SCGB1A1P11684 91 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 ORM2P19652 201 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 PAX8Q06710 450 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 ADAMTSL5Q6ZMM2 481 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 Q71RC1 249 aaPredicted RBP8.13□□□□□ -1.11
UPF3B-201ENST00000276201 AP1S3Q96PC3 154 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 SRSF8Q9BRL6 282 aaKnown RBP8.13□□□□□ -1.11
UPF3B-201ENST00000276201 HIGD1BQ9P298 99 aa8.13□□□□□ -1.11
UPF3B-201ENST00000276201 NSD1Q96L73 2696 aaPredicted RBP8.13□□□□□ -1.11
UPF3B-201ENST00000276201 PIP4P2Q8N4L2 257 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 FAM216BQ8N7L0 139 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 RABAC1Q9UI14 185 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 ABCA1O95477 2261 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 SERTM2A0A1B0GWG4 89 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 CIDEAO60543 219 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 HLA-DRB4P13762 266 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 CD24P25063 80 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 FAM201AQ5SY85 155 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 ERASQ7Z444 233 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 OR2K2Q8NGT1 345 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 PRSS3P2Q8NHM4 247 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 HLA-DRB4X5D2U9 266 aa8.12□□□□□ -1.11
UPF3B-201ENST00000276201 SETD2Q9BYW2 2564 aaPredicted RBP8.11□□□□□ -1.11
UPF3B-201ENST00000276201 TMEM189A5PLL7 270 aa8.11□□□□□ -1.11
UPF3B-201ENST00000276201 FBLL1A6NHQ2 334 aaKnown RBP8.11□□□□□ -1.11
UPF3B-201ENST00000276201 K7EQM0 130 aa8.11□□□□□ -1.11
UPF3B-201ENST00000276201 NCR2O95944 276 aa8.11□□□□□ -1.11
UPF3B-201ENST00000276201 JMJD8Q96S16 334 aa8.11□□□□□ -1.11
UPF3B-201ENST00000276201 ABCA2Q9BZC7 2435 aa8.11□□□□□ -1.11
UPF3B-201ENST00000276201 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms