RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 INS-IGF2F8WCM5 200 aa10.19□□□□□ -0.78
COL8A1-202ENST00000273342 H3BRM9 83 aa10.19□□□□□ -0.78
COL8A1-202ENST00000273342 LOXP28300 417 aaPredicted RBP10.19□□□□□ -0.78
COL8A1-202ENST00000273342 ADIPOQQ15848 244 aa10.19□□□□□ -0.78
COL8A1-202ENST00000273342 JKAMPQ9P055 326 aa10.19□□□□□ -0.78
COL8A1-202ENST00000273342 CUL9Q8IWT3 2517 aa10.19□□□□□ -0.78
COL8A1-202ENST00000273342 IGKV2D-26A0A0A0MRZ7 120 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 MBD3L4A6NDZ8 208 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-202ENST00000273342 MBD3L3A6NE82 208 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-202ENST00000273342 MBD3L5A6NJ08 208 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-202ENST00000273342 G3V4G9 280 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 IGHV1-8P0DP01 117 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 APOBEC3AP31941 199 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-202ENST00000273342 PSG3Q16557 428 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 SIGLEC15Q6ZMC9 328 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 BOD1L2Q8IYS8 172 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 ORMDL3Q8N138 153 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 MBD3L2Q8NHZ7 208 aaPredicted RBP10.18□□□□□ -0.78
COL8A1-202ENST00000273342 ZNF292O60281 2723 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 K7EQM0 130 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 MC5RP33032 325 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 FXYD2P54710 66 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 PLA2G2CQ5R387 149 aa10.18□□□□□ -0.78
COL8A1-202ENST00000273342 TMEM178BH3BS89 294 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 PRSS1P07477 247 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 GATA1P15976 413 aaPredicted RBP10.17□□□□□ -0.78
COL8A1-202ENST00000273342 LGALS7P47929 136 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 BSPH1Q075Z2 132 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 SCNM1Q9BWG6 230 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 GTSF1LQ9H1H1 148 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 A0A1W2PPM0 123 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 TEX22C9J3V5 150 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 SH2D1AO60880 128 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 HBDP02042 147 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 HLA-DMBP28068 263 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 HSD52Q0P140 79 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 FAM104BQ5XKR9 115 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 ADAMTSL5Q6ZMM2 481 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 NDUFS7O75251 213 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 S100A7AQ86SG5 101 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 GTSCR1Q86UQ5 136 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 FAM169BQ8N8A8 192 aa10.17□□□□□ -0.78
COL8A1-202ENST00000273342 TEX48A0A1B0GUV7 120 aa10.16□□□□□ -0.78
COL8A1-202ENST00000273342 SAMD5Q5TGI4 173 aa10.16□□□□□ -0.78
COL8A1-202ENST00000273342 FABP2P12104 132 aa10.16□□□□□ -0.78
COL8A1-202ENST00000273342 TMEM108Q6UXF1 575 aa10.16□□□□□ -0.78
COL8A1-202ENST00000273342 RNF125Q96EQ8 232 aa10.16□□□□□ -0.78
COL8A1-202ENST00000273342 ABHD17AQ96GS6 310 aa10.16□□□□□ -0.78
COL8A1-202ENST00000273342 DYNLRB1Q9NP97 96 aa10.16□□□□□ -0.78
COL8A1-202ENST00000273342 NHP2Q9NX24 153 aaKnown RBP10.16□□□□□ -0.78
COL8A1-202ENST00000273342 IGHV1-3A0A0C4DH29 117 aa10.15□□□□□ -0.78
COL8A1-202ENST00000273342 I3L2K1 104 aa10.15□□□□□ -0.78
COL8A1-202ENST00000273342 ORM1P02763 201 aa10.15□□□□□ -0.78
COL8A1-202ENST00000273342 TMEM11P17152 192 aa10.15□□□□□ -0.78
COL8A1-202ENST00000273342 SMAGPQ0VAQ4 97 aa10.15□□□□□ -0.78
COL8A1-202ENST00000273342 LCNL1Q6ZST4 164 aa10.15□□□□□ -0.78
COL8A1-202ENST00000273342 NPFFR1Q9GZQ6 430 aa10.15□□□□□ -0.78
COL8A1-202ENST00000273342 EGR2P11161 476 aaPredicted RBP10.15□□□□□ -0.78
COL8A1-202ENST00000273342 FCER1GP30273 86 aa10.15□□□□□ -0.78
COL8A1-202ENST00000273342 LGALS9BQ3B8N2 356 aa10.15□□□□□ -0.78
COL8A1-202ENST00000273342 LGALS9CQ6DKI2 356 aa10.15□□□□□ -0.78
COL8A1-202ENST00000273342 SHANK2-AS3Q9BTD1 123 aa10.15□□□□□ -0.78
COL8A1-202ENST00000273342 LEPP41159 167 aa10.15□□□□□ -0.79
COL8A1-202ENST00000273342 ZNF80P51504 273 aaPredicted RBP10.15□□□□□ -0.79
COL8A1-202ENST00000273342 TMEM30BQ3MIR4 351 aa10.15□□□□□ -0.79
COL8A1-202ENST00000273342 ZNF491Q8N8L2 437 aa10.15□□□□□ -0.79
COL8A1-202ENST00000273342 RPEQ96AT9 228 aa10.15□□□□□ -0.79
COL8A1-202ENST00000273342 NCOR2Q9Y618 2525 aa10.14□□□□□ -0.79
COL8A1-202ENST00000273342 PPIAL4CA0A0B4J2A2 164 aa10.14□□□□□ -0.79
COL8A1-202ENST00000273342 PPIAL4GP0DN37 164 aa10.14□□□□□ -0.79
COL8A1-202ENST00000273342 C16orf54Q6UWD8 224 aa10.14□□□□□ -0.79
COL8A1-202ENST00000273342 AAMDCQ9H7C9 122 aa10.14□□□□□ -0.79
COL8A1-202ENST00000273342 SMIM13P0DJ93 91 aa10.14□□□□□ -0.79
COL8A1-202ENST00000273342 C1orf185Q5T7R7 199 aa10.14□□□□□ -0.79
COL8A1-202ENST00000273342 IGHV3OR16-13A0A075B7E8 117 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 IGHV3-74A0A0B4J1X5 117 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 K7EIM0 57 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 HES1Q14469 280 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 TMEM155Q4W5P6 130 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 CLEC2AQ6UVW9 174 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 VGLL1Q99990 258 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 AMTNQ6UX39 209 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 FOXC2Q99958 501 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 TMEM160Q9NX00 188 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 TMEM14CQ9P0S9 112 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 SPG11Q96JI7 2443 aa10.13□□□□□ -0.79
COL8A1-202ENST00000273342 RBPJQ06330 500 aa10.12□□□□□ -0.79
COL8A1-202ENST00000273342 OR9G4Q8NGQ1 327 aa10.12□□□□□ -0.79
COL8A1-202ENST00000273342 H3BRN7 92 aa10.12□□□□□ -0.79
COL8A1-202ENST00000273342 HOXB4P17483 251 aaPredicted RBP10.12□□□□□ -0.79
COL8A1-202ENST00000273342 DLX6P56179 175 aa10.12□□□□□ -0.79
COL8A1-202ENST00000273342 NEGR1Q7Z3B1 354 aa10.12□□□□□ -0.79
COL8A1-202ENST00000273342 ANKHD1Q8IWZ3 2542 aaKnown RBP10.12□□□□□ -0.79
COL8A1-202ENST00000273342 CHD8Q9HCK8 2581 aa10.12□□□□□ -0.79
COL8A1-202ENST00000273342 AGRNO00468 2067 aa10.12□□□□□ -0.79
COL8A1-202ENST00000273342 IGHV3-66A0A0C4DH42 116 aa10.12□□□□□ -0.79
COL8A1-202ENST00000273342 OR4X2Q8NGF9 303 aa10.12□□□□□ -0.79
COL8A1-202ENST00000273342 TIMM23O14925 209 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 ERCC8Q13216 396 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 WFDC2Q14508 124 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms