RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 COLQQ9Y215 455 aaPredicted RBP6.52□□□□□ -1.37
LIMD1-201ENST00000273317 IGKV1-27A0A075B6S5 117 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 RPP25LQ8N5L8 163 aaKnown RBP6.52□□□□□ -1.37
LIMD1-201ENST00000273317 TMEM158Q8WZ71 300 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 SS18L2Q9UHA2 77 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 NDUFB8O95169 186 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 RBMY1FQ15415 496 aaKnown RBP6.52□□□□□ -1.37
LIMD1-201ENST00000273317 TMEM200BQ69YZ2 307 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 hDV102S1A0JD36 115 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 QRFPP83859 136 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 EFNA4P52798 201 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 IL17RELQ6ZVW7 336 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 RSPO3Q9BXY4 272 aaPredicted RBP6.52□□□□□ -1.37
LIMD1-201ENST00000273317 ZNF462Q96JM2 2506 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 TECTAO75443 2155 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 PRSS46E5RG02 174 aa6.52□□□□□ -1.37
LIMD1-201ENST00000273317 PNRC2Q9NPJ4 139 aaKnown RBP6.52□□□□□ -1.37
LIMD1-201ENST00000273317 Q6P435 159 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 ZFP36L1Q07352 338 aaKnown RBP6.51□□□□□ -1.37
LIMD1-201ENST00000273317 C3orf36Q3SXR2 165 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 ALPK3Q96L96 1907 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 F8W1H4 67 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 ZNF114Q8NC26 417 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 MPV17L2Q567V2 206 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 TRAV40A0A0B4J280 105 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 SVIPQ8NHG7 77 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 CACNA1AO00555 2505 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 IGKV1-12A0A0C4DH73 117 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 BUB1B-PAK6H3BSN5 160 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 SOCS3O14543 225 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 IGKV1D-12P01611 117 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 SRD5A1P18405 259 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 ZNF876PQ49A33 203 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 A0A087WV48 116 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 FOXF2Q12947 444 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 DAZ1Q9NQZ3 744 aaKnown RBP6.51□□□□□ -1.37
LIMD1-201ENST00000273317 PRRC2AP48634 2157 aaKnown RBP6.51□□□□□ -1.37
LIMD1-201ENST00000273317 IGHV3-73A0A0B4J1V6 119 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 C9orf118A6NHY6 69 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 C15orf62A8K5M9 175 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 SUMO4Q6EEV6 95 aa6.51□□□□□ -1.37
LIMD1-201ENST00000273317 MCRIP2Q9BUT9 160 aaKnown RBP6.51□□□□□ -1.37
LIMD1-201ENST00000273317 SAP30O75446 220 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 RNF166Q96A37 237 aaPredicted RBP6.5□□□□□ -1.37
LIMD1-201ENST00000273317 GAFA1Q96PS6 74 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 SIGLEC9Q9Y336 463 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 RNF114Q9Y508 228 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 ZNF474Q6S9Z5 364 aaPredicted RBP6.5□□□□□ -1.37
LIMD1-201ENST00000273317 ZCCHC24Q8N2G6 241 aaKnown RBP6.5□□□□□ -1.37
LIMD1-201ENST00000273317 C14orf178Q8N769 122 aaPredicted RBP6.5□□□□□ -1.37
LIMD1-201ENST00000273317 TRAV13-1A0A0B4J241 112 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 PPIFP30405 207 aaKnown RBP6.5□□□□□ -1.37
LIMD1-201ENST00000273317 GAGE1Q13065 139 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 Q8N8P6 123 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 TMEM256Q8N2U0 113 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 B4DSR2 109 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.5□□□□□ -1.37
LIMD1-201ENST00000273317 C9orf153Q5TBE3 101 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 ZC2HC1BQ5TFG8 222 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 CD177Q8N6Q3 437 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 TMEM14BQ9NUH8 114 aa6.5□□□□□ -1.37
LIMD1-201ENST00000273317 TRAV8-3A0A0A6YYJ7 113 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 A8MWP6 167 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 K7EP34 96 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 IGHG4P01861 327 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 C6orf226Q5I0X4 101 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 I3L3M4 83 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 YPEL3P61236 119 aaPredicted RBP6.49□□□□□ -1.37
LIMD1-201ENST00000273317 LINC01545Q5VT33 79 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 PRIMA1Q86XR5 153 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 ANAPC10Q9UM13 185 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 CDKN1AP38936 164 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 PFN1P07737 140 aaKnown RBP6.49□□□□□ -1.37
LIMD1-201ENST00000273317 C1orf159Q96HA4 380 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 TAL2Q16559 108 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 RNASE2P10153 161 aaKnown RBP6.49□□□□□ -1.37
LIMD1-201ENST00000273317 IGHV1-24A0A0C4DH33 117 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 INS-IGF2F8WCM5 200 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 DOPEY1Q5JWR5 2465 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 SNHG12Q9BXW3 62 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 RPL32P62910 135 aaKnown RBP6.49□□□□□ -1.37
LIMD1-201ENST00000273317 TMEM14CQ9P0S9 112 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 TRAV12-1A0A0B4J245 112 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 C9JAW5 83 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 PMVKQ15126 192 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 NSUN5P1Q3KNT7 163 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 PYY3Q5JQD4 70 aa6.49□□□□□ -1.37
LIMD1-201ENST00000273317 NTN3O00634 580 aaPredicted RBP6.48□□□□□ -1.37
LIMD1-201ENST00000273317 GATA3P23771 443 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 NTF4P34130 210 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 ZNF672Q499Z4 452 aaPredicted RBP6.48□□□□□ -1.37
LIMD1-201ENST00000273317 Q8TAT8 98 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 PKIGQ9Y2B9 76 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 HGFACQ04756 655 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 FAM231DQ6ZW35 169 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 ZNF106Q9H2Y7 1883 aaKnown RBP6.48□□□□□ -1.37
LIMD1-201ENST00000273317 C3orf56Q8N813 242 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 Q8TCH9 128 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 TRAV13-2A0A0B4J235 113 aa6.48□□□□□ -1.37
LIMD1-201ENST00000273317 GATA4P43694 442 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms