RNA–Protein interactions for RNA: ENST00000271636.11

CGN-201, Transcript of cingulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGN, Length 5,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-201ENST00000271636 KIAA1549Q9HCM3 1950 aa11.85□□□□□ -0.51
CGN-201ENST00000271636 CD7P09564 240 aa11.85□□□□□ -0.51
CGN-201ENST00000271636 FNDC4Q9H6D8 234 aaPredicted RBP11.85□□□□□ -0.51
CGN-201ENST00000271636 IGLV2-23P01705 113 aa11.85□□□□□ -0.51
CGN-201ENST00000271636 GTSCR1Q86UQ5 136 aa11.85□□□□□ -0.51
CGN-201ENST00000271636 TRBV19A0A075B6N1 114 aa11.84□□□□□ -0.51
CGN-201ENST00000271636 GGTLC3B5MD39 225 aa11.84□□□□□ -0.51
CGN-201ENST00000271636 RPL15P61313 204 aaKnown RBP11.84□□□□□ -0.51
CGN-201ENST00000271636 Q5PR19 223 aa11.84□□□□□ -0.51
CGN-201ENST00000271636 CHCHD1Q96BP2 118 aaKnown RBP11.84□□□□□ -0.51
CGN-201ENST00000271636 C18orf15Q96N68 181 aa11.84□□□□□ -0.51
CGN-201ENST00000271636 LINC01549A6NIU2 74 aa11.84□□□□□ -0.51
CGN-201ENST00000271636 H3BUT2 72 aa11.84□□□□□ -0.51
CGN-201ENST00000271636 EMP1P54849 157 aa11.84□□□□□ -0.51
CGN-201ENST00000271636 ST20Q9HBF5 79 aa11.84□□□□□ -0.51
CGN-201ENST00000271636 RBMY1BA6NDE4 496 aaKnown RBP11.83□□□□□ -0.52
CGN-201ENST00000271636 RBMY1EA6NEQ0 496 aaKnown RBP11.83□□□□□ -0.52
CGN-201ENST00000271636 RBMY1DP0C7P1 496 aaKnown RBP11.83□□□□□ -0.52
CGN-201ENST00000271636 LINC00614P0C842 121 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 RBMY1A1P0DJD3 496 aaKnown RBP11.83□□□□□ -0.52
CGN-201ENST00000271636 RBMY1CP0DJD4 496 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 KMT2EQ8IZD2 1858 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 A0A1B0GWB2 263 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 C22orf34Q6ZV56 151 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 FOXC2Q99958 501 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 IFI27P40305 119 aaPredicted RBP11.83□□□□□ -0.52
CGN-201ENST00000271636 FXYD5Q96DB9 178 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 HTTP42858 3142 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 BRWD1-AS2P59051 145 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 RUSC1-AS1Q66K80 236 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 ZNF664Q8N3J9 261 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 MEGF9Q9H1U4 602 aa11.83□□□□□ -0.52
CGN-201ENST00000271636 MALRD1Q5VYJ5 2156 aa11.82□□□□□ -0.52
CGN-201ENST00000271636 PROP1O75360 226 aa11.82□□□□□ -0.52
CGN-201ENST00000271636 ZNF138P52744 262 aa11.82□□□□□ -0.52
CGN-201ENST00000271636 BEX4Q9NWD9 120 aaPredicted RBP11.82□□□□□ -0.52
CGN-201ENST00000271636 DYSFO75923 2080 aa11.82□□□□□ -0.52
CGN-201ENST00000271636 IGFBPL1Q8WX77 278 aa11.82□□□□□ -0.52
CGN-201ENST00000271636 LINC00477Q96M19 166 aa11.82□□□□□ -0.52
CGN-201ENST00000271636 ARHGAP21Q5T5U3 1957 aa11.82□□□□□ -0.52
CGN-201ENST00000271636 NUP35Q8NFH5 326 aa11.82□□□□□ -0.52
CGN-201ENST00000271636 VCX2Q9H322 139 aa11.82□□□□□ -0.52
CGN-201ENST00000271636 LINC00527Q9UJ94 153 aa11.82□□□□□ -0.52
CGN-201ENST00000271636 LY6G5BQ8NDX9 201 aa11.82□□□□□ -0.52
CGN-201ENST00000271636 LCN12Q6JVE5 192 aa11.81□□□□□ -0.52
CGN-201ENST00000271636 CA1P00915 261 aaPredicted RBP11.81□□□□□ -0.52
CGN-201ENST00000271636 MALP21145 153 aa11.81□□□□□ -0.52
CGN-201ENST00000271636 TRGV4A0A0C4DH28 118 aa11.81□□□□□ -0.52
CGN-201ENST00000271636 MRPL27Q9P0M9 148 aaKnown RBP11.81□□□□□ -0.52
CGN-201ENST00000271636 CEP350Q5VT06 3117 aa11.81□□□□□ -0.52
CGN-201ENST00000271636 IGKV2-40A0A087WW87 121 aaPredicted RBP11.81□□□□□ -0.52
CGN-201ENST00000271636 IGKV2D-40P01614 121 aaPredicted RBP11.81□□□□□ -0.52
CGN-201ENST00000271636 NXT2Q9NPJ8 142 aaKnown RBP11.81□□□□□ -0.52
CGN-201ENST00000271636 NDUFA3O95167 84 aa11.8□□□□□ -0.52
CGN-201ENST00000271636 MUC21Q5SSG8 566 aa11.8□□□□□ -0.52
CGN-201ENST00000271636 TMEM256Q8N2U0 113 aa11.8□□□□□ -0.52
CGN-201ENST00000271636 SSBP4Q9BWG4 385 aaPredicted RBP11.8□□□□□ -0.52
CGN-201ENST00000271636 MRPL16Q9NX20 251 aaKnown RBP11.8□□□□□ -0.52
CGN-201ENST00000271636 NDUFS7O75251 213 aa11.8□□□□□ -0.52
CGN-201ENST00000271636 GZMBP10144 247 aa11.8□□□□□ -0.52
CGN-201ENST00000271636 RIPPLY3P57055 190 aa11.8□□□□□ -0.52
CGN-201ENST00000271636 NBASA2RRP1 2371 aa11.8□□□□□ -0.52
CGN-201ENST00000271636 DAZ1Q9NQZ3 744 aaKnown RBP11.8□□□□□ -0.52
CGN-201ENST00000271636 I3L2K1 104 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 IGHV4-39P01824 125 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 ZNF295-AS1Q8N0V1 137 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 DOCK11Q5JSL3 2073 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 TRBV7-9A0A0J9YWB2 115 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 SRSF1Q07955 248 aaKnown RBP eCLIP11.79□□□□□ -0.52
CGN-201ENST00000271636 ORMDL2Q53FV1 153 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 C10orf105Q8TEF2 133 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 CYSLTR1Q9Y271 337 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 NDUFA4O00483 81 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 ZNF491Q8N8L2 437 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 USF3Q68DE3 2245 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 MUC21A0A0G2JKD1 596 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 MUC21A0A140T8X8 626 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 EREGO14944 169 aa11.79□□□□□ -0.52
CGN-201ENST00000271636 CENPVL3A0A0U1RRI6 287 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 Q8N7P7 452 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 V9GYV3 84 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 PLCE1Q9P212 2302 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 SH2D1AO60880 128 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 CRPP02741 224 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 LINC01559Q495D7 138 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 Q0VG73 95 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 ATP6V0BQ99437 205 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 SLC25A20O43772 301 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 CRYGCP07315 174 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 GLMPQ8WWB7 406 aa11.78□□□□□ -0.52
CGN-201ENST00000271636 IGLV11-55A0A075B6I3 123 aa11.77□□□□□ -0.53
CGN-201ENST00000271636 SIRPDQ9H106 197 aa11.77□□□□□ -0.53
CGN-201ENST00000271636 DOPEY2Q9Y3R5 2298 aa11.77□□□□□ -0.53
CGN-201ENST00000271636 SMIM27A0A1W2PRY6 76 aa11.77□□□□□ -0.53
CGN-201ENST00000271636 A8MWP6 167 aa11.77□□□□□ -0.53
CGN-201ENST00000271636 NSUN5P1Q3KNT7 163 aa11.77□□□□□ -0.53
CGN-201ENST00000271636 LINC00479Q96M42 142 aa11.77□□□□□ -0.53
CGN-201ENST00000271636 TEX22C9J3V5 150 aa11.77□□□□□ -0.53
CGN-201ENST00000271636 RNF223E7ERA6 249 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms