RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 PRR20BP86481 221 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 PRR20AP86496 221 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 LAGE3Q14657 143 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 AMTNQ6UX39 209 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 NEU4Q8WWR8 484 aaPredicted RBP9.29□□□□□ -0.92
VPS33A-201ENST00000267199 SIGLEC9Q9Y336 463 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 IGKV3D-20A0A0C4DH25 116 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 IGLV1-44P01699 117 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 RNASE1P07998 156 aaKnown RBP9.29□□□□□ -0.92
VPS33A-201ENST00000267199 SPINK8P0C7L1 97 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 LINC00527Q9UJ94 153 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 A0A0U1RRA0 63 aa9.29□□□□□ -0.92
VPS33A-201ENST00000267199 MUC22E2RYF6 1773 aaPredicted RBP9.28□□□□□ -0.92
VPS33A-201ENST00000267199 LY6HO94772 140 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 WT1-ASQ06250 92 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 FAM231DQ6ZW35 169 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 NUP37Q8NFH4 326 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 SRRM4A7MD48 611 aaKnown RBP9.28□□□□□ -0.92
VPS33A-201ENST00000267199 Q6ZPA2 131 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 SMPXQ9UHP9 88 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 C2CD3Q4AC94 2353 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 K7EP34 96 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 SUMO2P61956 95 aaKnown RBP9.28□□□□□ -0.92
VPS33A-201ENST00000267199 SSBP2P81877 361 aaPredicted RBP9.28□□□□□ -0.92
VPS33A-201ENST00000267199 RHOGP84095 191 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 GAGE2BQ13066 116 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 ORMDL2Q53FV1 153 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 C8orf49Q96NF6 230 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
VPS33A-201ENST00000267199 KLRD1Q13241 179 aa9.27□□□□□ -0.92
VPS33A-201ENST00000267199 CIRBPQ14011 172 aaKnown RBP9.27□□□□□ -0.92
VPS33A-201ENST00000267199 TMEM8BA6NDV4 472 aa9.27□□□□□ -0.93
VPS33A-201ENST00000267199 GATA4P43694 442 aa9.27□□□□□ -0.93
VPS33A-201ENST00000267199 ODF3L1Q8IXM7 274 aa9.27□□□□□ -0.93
VPS33A-201ENST00000267199 DEFB125Q8N687 156 aa9.27□□□□□ -0.93
VPS33A-201ENST00000267199 NDUFA4L2Q9NRX3 87 aa9.27□□□□□ -0.93
VPS33A-201ENST00000267199 C19orf54Q5BKX5 351 aa9.27□□□□□ -0.93
VPS33A-201ENST00000267199 C11orf1Q9H5F2 150 aa9.27□□□□□ -0.93
VPS33A-201ENST00000267199 DLX4Q92988 240 aaPredicted RBP9.27□□□□□ -0.93
VPS33A-201ENST00000267199 GFRA4Q9GZZ7 299 aa9.27□□□□□ -0.93
VPS33A-201ENST00000267199 H3BMG7 143 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 CNTFRP26992 372 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 TPSG1Q9NRR2 321 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 SIGLEC8Q9NYZ4 499 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 TLN1Q9Y490 2541 aaKnown RBP9.26□□□□□ -0.93
VPS33A-201ENST00000267199 TNFRSF6BO95407 300 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 CD7P09564 240 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 ATP5J2P56134 94 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 PAPPA-AS1Q5QFB9 102 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 PLA2G2CQ5R387 149 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 FAM104BQ5XKR9 115 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 ZFAND6Q6FIF0 208 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 ZNF492Q9P255 531 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 A0A1W2PPM0 123 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 BUB1B-PAK6H3BSN5 160 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 PPP1R17O96001 155 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 SRD5A1P18405 259 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 NPC2P61916 151 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 MORN5Q5VZ52 161 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 PCP2Q8IVA1 136 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 RAX2Q96IS3 184 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 TMEM238C9JI98 176 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 AZU1P20160 251 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 ERCC8Q13216 396 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 YPEL4Q96NS1 127 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 SLC50A1Q9BRV3 221 aa9.26□□□□□ -0.93
VPS33A-201ENST00000267199 C14orf178Q8N769 122 aaPredicted RBP9.25□□□□□ -0.93
VPS33A-201ENST00000267199 FXYD5Q96DB9 178 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 DKK2Q9UBU2 259 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 TP73-AS1Q9UF72 201 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 DSCAML1Q8TD84 2053 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 IGLV3-9A0A075B6K5 115 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 E7EQL1 145 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 TMEM262E9PQX1 116 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 COL8A2P25067 703 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 FAM106AQ4KMX7 169 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 CT83Q5H943 113 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 VCX2Q9H322 139 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 FAM215AQ9Y5M1 114 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 CSPG4Q6UVK1 2322 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 NDPQ00604 133 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 DIAPH2-AS1Q14236 149 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 MRPL51Q4U2R6 128 aaKnown RBP9.25□□□□□ -0.93
VPS33A-201ENST00000267199 DYNLRB2Q8TF09 96 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 DDB2Q92466 427 aa9.25□□□□□ -0.93
VPS33A-201ENST00000267199 C15orf32Q32M92 178 aa9.24□□□□□ -0.93
VPS33A-201ENST00000267199 TMEM155Q4W5P6 130 aa9.24□□□□□ -0.93
VPS33A-201ENST00000267199 NCOR1P1Q9H4R4 102 aa9.24□□□□□ -0.93
VPS33A-201ENST00000267199 DNAL4O96015 105 aa9.24□□□□□ -0.93
VPS33A-201ENST00000267199 THBDP07204 575 aa9.24□□□□□ -0.93
VPS33A-201ENST00000267199 WT1P19544 449 aaPredicted RBP9.24□□□□□ -0.93
VPS33A-201ENST00000267199 TMEM249Q2WGJ8 235 aa9.24□□□□□ -0.93
VPS33A-201ENST00000267199 ERG28Q9UKR5 140 aa9.24□□□□□ -0.93
VPS33A-201ENST00000267199 NPYP01303 97 aa9.24□□□□□ -0.93
VPS33A-201ENST00000267199 ZNF747Q9BV97 191 aa9.24□□□□□ -0.93
VPS33A-201ENST00000267199 IGLV2-14P01704 120 aa9.24□□□□□ -0.93
VPS33A-201ENST00000267199 SPRNQ5BIV9 151 aa9.24□□□□□ -0.93
VPS33A-201ENST00000267199 H7C1H1 209 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 K7EMI3 77 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 380.7 ms