RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 OR13C6PQ8NH95 151 aa12.35□□□□□ -0.43
TIMP3-201ENST00000266085 POU2AF1Q16633 256 aa12.34□□□□□ -0.43
TIMP3-201ENST00000266085 AMBPP02760 352 aa12.34□□□□□ -0.43
TIMP3-201ENST00000266085 COTL1Q14019 142 aa12.34□□□□□ -0.43
TIMP3-201ENST00000266085 Q86TA4 180 aa12.34□□□□□ -0.43
TIMP3-201ENST00000266085 MRPS16Q9Y3D3 137 aaKnown RBP12.34□□□□□ -0.43
TIMP3-201ENST00000266085 DPM2O94777 84 aa12.34□□□□□ -0.43
TIMP3-201ENST00000266085 LINC01549A6NIU2 74 aa12.34□□□□□ -0.43
TIMP3-201ENST00000266085 PCNX3Q9H6A9 2034 aa12.34□□□□□ -0.43
TIMP3-201ENST00000266085 IGHV2-70P01814 119 aa12.33□□□□□ -0.44
TIMP3-201ENST00000266085 Q6ZSR3 168 aa12.33□□□□□ -0.44
TIMP3-201ENST00000266085 ADORA2A-AS1P86434 159 aa12.33□□□□□ -0.44
TIMP3-201ENST00000266085 RCHY1Q96PM5 261 aa12.33□□□□□ -0.44
TIMP3-201ENST00000266085 MRPL16Q9NX20 251 aaKnown RBP12.33□□□□□ -0.44
TIMP3-201ENST00000266085 CHD8Q9HCK8 2581 aa12.32□□□□□ -0.44
TIMP3-201ENST00000266085 IL15RAQ13261 267 aa12.32□□□□□ -0.44
TIMP3-201ENST00000266085 TLN2Q9Y4G6 2542 aa12.32□□□□□ -0.44
TIMP3-201ENST00000266085 KRTAP27-1Q3LI81 207 aa12.32□□□□□ -0.44
TIMP3-201ENST00000266085 PRR31Q5SQ13 230 aa12.32□□□□□ -0.44
TIMP3-201ENST00000266085 LAMTOR2Q9Y2Q5 125 aa12.32□□□□□ -0.44
TIMP3-201ENST00000266085 DNAL4O96015 105 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 IGHV2-5P01817 119 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 Q8NA96 180 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 NDUFAF3Q9BU61 184 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 DPH3P1Q9H4G8 78 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 LHBP01229 141 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 TDGF1P3P51864 188 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 TMEM249Q2WGJ8 235 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 TMEM256Q8N2U0 113 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 APOMO95445 188 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 LYPD6Q86Y78 171 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 C1orf122Q6ZSJ8 110 aa12.31□□□□□ -0.44
TIMP3-201ENST00000266085 A0A1B0GV90 55 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 CD28P10747 220 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 LAGE3Q14657 143 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 LINC01559Q495D7 138 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 HAPLN4Q86UW8 402 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 TRBV19A0A075B6N1 114 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 ZNF415Q09FC8 603 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 DENND4AQ7Z401 1863 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 ZNF876PQ49A33 203 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 DPH3Q96FX2 82 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 CHCHD5Q9BSY4 110 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 RNF114Q9Y508 228 aa12.3□□□□□ -0.44
TIMP3-201ENST00000266085 J3QLI3 93 aa12.29□□□□□ -0.44
TIMP3-201ENST00000266085 ZNF726P1Q15940 193 aa12.29□□□□□ -0.44
TIMP3-201ENST00000266085 Q71RC1 249 aaPredicted RBP12.29□□□□□ -0.44
TIMP3-201ENST00000266085 C14orf178Q8N769 122 aaPredicted RBP12.29□□□□□ -0.44
TIMP3-201ENST00000266085 CYYR1Q96J86 154 aa12.29□□□□□ -0.44
TIMP3-201ENST00000266085 C1QTNF4Q9BXJ3 329 aa12.29□□□□□ -0.44
TIMP3-201ENST00000266085 IGKV3D-20A0A0C4DH25 116 aa12.29□□□□□ -0.44
TIMP3-201ENST00000266085 C1orf194Q5T5A4 169 aa12.29□□□□□ -0.44
TIMP3-201ENST00000266085 C8orf31Q8N9H6 132 aa12.29□□□□□ -0.44
TIMP3-201ENST00000266085 RNASE1P07998 156 aaKnown RBP12.29□□□□□ -0.44
TIMP3-201ENST00000266085 FXYD7P58549 80 aa12.29□□□□□ -0.44
TIMP3-201ENST00000266085 DEFB131AP59861 70 aa12.29□□□□□ -0.44
TIMP3-201ENST00000266085 TRGV1A0A0A0MS02 117 aa12.28□□□□□ -0.44
TIMP3-201ENST00000266085 IGHV4-61A0A0C4DH41 118 aa12.28□□□□□ -0.44
TIMP3-201ENST00000266085 ERCC8Q13216 396 aa12.28□□□□□ -0.44
TIMP3-201ENST00000266085 MED12LQ86YW9 2145 aa12.28□□□□□ -0.44
TIMP3-201ENST00000266085 EML6Q6ZMW3 1958 aa12.28□□□□□ -0.44
TIMP3-201ENST00000266085 LINC00587B1AMM8 73 aa12.28□□□□□ -0.44
TIMP3-201ENST00000266085 CHTOPQ9Y3Y2 248 aaKnown RBP12.28□□□□□ -0.44
TIMP3-201ENST00000266085 GGTLC3B5MD39 225 aa12.28□□□□□ -0.44
TIMP3-201ENST00000266085 IGKCP01834 107 aa12.28□□□□□ -0.44
TIMP3-201ENST00000266085 IGLC1P0CG04 106 aa12.28□□□□□ -0.44
TIMP3-201ENST00000266085 RPL36AP83881 106 aaKnown RBP12.28□□□□□ -0.44
TIMP3-201ENST00000266085 AMN1Q8IY45 258 aa12.28□□□□□ -0.44
TIMP3-201ENST00000266085 RPL36ALQ969Q0 106 aaKnown RBP12.28□□□□□ -0.44
TIMP3-201ENST00000266085 ZFYVE26Q68DK2 2539 aa12.27□□□□□ -0.44
TIMP3-201ENST00000266085 ARMS2P0C7Q2 107 aa12.27□□□□□ -0.44
TIMP3-201ENST00000266085 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.44
TIMP3-201ENST00000266085 SMPXQ9UHP9 88 aa12.27□□□□□ -0.44
TIMP3-201ENST00000266085 INSP01308 110 aa12.27□□□□□ -0.45
TIMP3-201ENST00000266085 CFAP161Q6P656 301 aa12.27□□□□□ -0.45
TIMP3-201ENST00000266085 RNF182Q8N6D2 247 aa12.27□□□□□ -0.45
TIMP3-201ENST00000266085 UBE2E2Q96LR5 201 aa12.27□□□□□ -0.45
TIMP3-201ENST00000266085 FAM120AOSQ5T036 256 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 IL17RELQ6ZVW7 336 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 GFRA4Q9GZZ7 299 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 MRPL27Q9P0M9 148 aaKnown RBP12.26□□□□□ -0.45
TIMP3-201ENST00000266085 C2CD3Q4AC94 2353 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 JMJD1CQ15652 2540 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 IGHV3-73A0A0B4J1V6 119 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 PFN1P07737 140 aaKnown RBP12.26□□□□□ -0.45
TIMP3-201ENST00000266085 TMEM75Q8N9X5 138 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 VCYO14598 125 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 SORL1Q92673 2214 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 FAM231BA6NCW3 169 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 MSMPQ1L6U9 139 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 ZNF492Q9P255 531 aa12.26□□□□□ -0.45
TIMP3-201ENST00000266085 PRADC1Q9BSG0 188 aa12.25□□□□□ -0.45
TIMP3-201ENST00000266085 SLC25A2Q9BXI2 301 aa12.25□□□□□ -0.45
TIMP3-201ENST00000266085 NDUFA4O00483 81 aa12.25□□□□□ -0.45
TIMP3-201ENST00000266085 CD300EQ496F6 205 aaPredicted RBP12.25□□□□□ -0.45
TIMP3-201ENST00000266085 IGFBPL1Q8WX77 278 aa12.25□□□□□ -0.45
TIMP3-201ENST00000266085 IGHV4-30-2A0A087WSY4 118 aa12.25□□□□□ -0.45
TIMP3-201ENST00000266085 IGHV4-39P01824 125 aa12.25□□□□□ -0.45
TIMP3-201ENST00000266085 C3orf56Q8N813 242 aa12.25□□□□□ -0.45
TIMP3-201ENST00000266085 USP9XQ93008 2570 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms