RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ZNF80P51504 273 aaPredicted RBP13.19□□□□□ -0.3
SQLE-201ENST00000265896 ERCC8Q13216 396 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 TWIST1Q15672 202 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 C3orf36Q3SXR2 165 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 FAM71F2Q6NXP2 309 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 ASCL5Q7RTU5 278 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 NDFIP1Q9BT67 221 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 SHANK2-AS3Q9BTD1 123 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 CREBBPQ92793 2442 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 J3KRW8 73 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 HAX1O00165 279 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 NMUP48645 174 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 PSG3Q16557 428 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 ZNF414Q96IQ9 312 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 ZNF747Q9BV97 191 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 ST20Q9HBF5 79 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 SIGLEC8Q9NYZ4 499 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 CD3EP07766 207 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 PSG9Q00887 426 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 Q6ZQT7 251 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 DYNAPQ8N1N2 210 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 RNF182Q8N6D2 247 aa13.18□□□□□ -0.3
SQLE-201ENST00000265896 SH2D1AO60880 128 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 RHOGP84095 191 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 RIGQ13278 110 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 ZNF672Q499Z4 452 aaPredicted RBP13.17□□□□□ -0.3
SQLE-201ENST00000265896 DEFB104AQ8WTQ1 72 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 THYN1Q9P016 225 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 A0A096LNJ9 63 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 IGHV2-70DA0A0C4DH43 119 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 APOBEC3AP31941 199 aaPredicted RBP13.17□□□□□ -0.3
SQLE-201ENST00000265896 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 TMEM189A5PLL7 270 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 ORM1P02763 201 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 GPR183P32249 361 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 RBPJQ06330 500 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 PRELID3AQ96N28 172 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 HSPB8Q9UJY1 196 aa13.17□□□□□ -0.3
SQLE-201ENST00000265896 CRXO43186 299 aaPredicted RBP13.16□□□□□ -0.3
SQLE-201ENST00000265896 NDUFS7O75251 213 aa13.16□□□□□ -0.3
SQLE-201ENST00000265896 EGR2P11161 476 aaPredicted RBP13.16□□□□□ -0.3
SQLE-201ENST00000265896 CT83Q5H943 113 aa13.16□□□□□ -0.3
SQLE-201ENST00000265896 PCP2Q8IVA1 136 aa13.16□□□□□ -0.3
SQLE-201ENST00000265896 VPS25Q9BRG1 176 aa13.16□□□□□ -0.3
SQLE-201ENST00000265896 HIVEP3Q5T1R4 2406 aa13.15□□□□□ -0.3
SQLE-201ENST00000265896 H3BRN7 92 aa13.15□□□□□ -0.3
SQLE-201ENST00000265896 NPYP01303 97 aa13.15□□□□□ -0.3
SQLE-201ENST00000265896 FOXC1Q12948 553 aa13.15□□□□□ -0.3
SQLE-201ENST00000265896 KAAG1Q9UBP8 84 aa13.15□□□□□ -0.3
SQLE-201ENST00000265896 DKK2Q9UBU2 259 aa13.15□□□□□ -0.3
SQLE-201ENST00000265896 NBR2O15453 112 aa13.15□□□□□ -0.3
SQLE-201ENST00000265896 C2orf91Q6ZV80 131 aa13.15□□□□□ -0.3
SQLE-201ENST00000265896 UTP20O75691 2785 aaKnown RBP13.15□□□□□ -0.31
SQLE-201ENST00000265896 K7EQM0 130 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 PLP1P60201 277 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 OR10AG1Q8NH19 301 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 GFRA4Q9GZZ7 299 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 AAMDCQ9H7C9 122 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 PRAC2D3DTV9 90 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 CKS2P33552 79 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 C7orf71A4D174 169 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 MRPL51Q4U2R6 128 aaKnown RBP13.14□□□□□ -0.31
SQLE-201ENST00000265896 PET117Q6UWS5 81 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 FANCD2OSQ96PS1 177 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 RABAC1Q9UI14 185 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 LINC00527Q9UJ94 153 aa13.14□□□□□ -0.31
SQLE-201ENST00000265896 CSPG4Q6UVK1 2322 aa13.13□□□□□ -0.31
SQLE-201ENST00000265896 CSN1S1P47710 185 aa13.13□□□□□ -0.31
SQLE-201ENST00000265896 ECSCRQ19T08 205 aa13.13□□□□□ -0.31
SQLE-201ENST00000265896 SAP30O75446 220 aa13.13□□□□□ -0.31
SQLE-201ENST00000265896 CCL21O00585 134 aa13.12□□□□□ -0.31
SQLE-201ENST00000265896 LINC01545Q5VT33 79 aa13.12□□□□□ -0.31
SQLE-201ENST00000265896 DEFB125Q8N687 156 aa13.12□□□□□ -0.31
SQLE-201ENST00000265896 DPM3Q9P2X0 92 aa13.12□□□□□ -0.31
SQLE-201ENST00000265896 SOX21Q9Y651 276 aaPredicted RBP13.12□□□□□ -0.31
SQLE-201ENST00000265896 FAM231BA6NCW3 169 aa13.11□□□□□ -0.31
SQLE-201ENST00000265896 H3BUT2 72 aa13.11□□□□□ -0.31
SQLE-201ENST00000265896 TMEM14CQ9P0S9 112 aa13.11□□□□□ -0.31
SQLE-201ENST00000265896 DOPEY2Q9Y3R5 2298 aa13.11□□□□□ -0.31
SQLE-201ENST00000265896 B9A039 149 aa13.11□□□□□ -0.31
SQLE-201ENST00000265896 C8orf31Q8N9H6 132 aa13.11□□□□□ -0.31
SQLE-201ENST00000265896 CST9LQ9H4G1 147 aa13.11□□□□□ -0.31
SQLE-201ENST00000265896 TRAV26-2A0A0B4J265 109 aa13.11□□□□□ -0.31
SQLE-201ENST00000265896 F8W735 103 aaPredicted RBP13.11□□□□□ -0.31
SQLE-201ENST00000265896 MRPS12O15235 138 aaKnown RBP13.11□□□□□ -0.31
SQLE-201ENST00000265896 FAM162BQ5T6X4 162 aa13.11□□□□□ -0.31
SQLE-201ENST00000265896 SMIM12Q96EX1 92 aa13.11□□□□□ -0.31
SQLE-201ENST00000265896 IGHV3OR16-10A0A075B7F0 116 aa13.1□□□□□ -0.31
SQLE-201ENST00000265896 DEFB1P60022 68 aa13.1□□□□□ -0.31
SQLE-201ENST00000265896 C12orf54Q6X4T0 127 aa13.1□□□□□ -0.31
SQLE-201ENST00000265896 C21orf62Q9NYP8 219 aa13.1□□□□□ -0.31
SQLE-201ENST00000265896 PVRIGQ6DKI7 326 aa13.1□□□□□ -0.31
SQLE-201ENST00000265896 ORMDL3Q8N138 153 aa13.1□□□□□ -0.31
SQLE-201ENST00000265896 LINC01548A6NM66 108 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 COX8AP10176 69 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 FAM104BQ5XKR9 115 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 PPP1R14DQ9NXH3 145 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 SORL1Q92673 2214 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 GAGE12BA1L429 117 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms