RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 ZNF295-AS1Q8N0V1 137 aa11.34□□□□□ -0.59
PDLIM2-201ENST00000265810 LINC01548A6NM66 108 aa11.34□□□□□ -0.59
PDLIM2-201ENST00000265810 CRYGCP07315 174 aa11.34□□□□□ -0.59
PDLIM2-201ENST00000265810 ERCC8Q13216 396 aa11.34□□□□□ -0.59
PDLIM2-201ENST00000265810 TCF21O43680 179 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 RNF224P0DH78 156 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 FCER1GP30273 86 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 DGAT2L7PQ6IED9 249 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 CTSGP08311 255 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 ZNF502Q8TBZ5 544 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 FXYD5Q96DB9 178 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 RNF114Q9Y508 228 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 Q6AWC8 147 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 PRSS57Q6UWY2 283 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 SSBP4Q9BWG4 385 aaPredicted RBP11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 GPR61Q9BZJ8 451 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 KLK15Q9H2R5 256 aa11.33□□□□□ -0.6
PDLIM2-201ENST00000265810 A6NDX4 124 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 IGHG2P01859 326 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 ACTL10Q5JWF8 245 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 TSKUQ8WUA8 353 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 DEFB136Q30KP8 78 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 TCTEX1D4Q5JR98 221 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 C17orf77Q96MU5 243 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 TMEM242Q9NWH2 141 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 ZNF56Q15929 161 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 TMEM136Q6ZRR5 245 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 FANCD2OSQ96PS1 177 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 HCFC1P51610 2035 aa11.32□□□□□ -0.6
PDLIM2-201ENST00000265810 TRBV20OR9-2A0A075B6H5 130 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 CXCL1P09341 107 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 SMIM6P0DI80 62 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 LEPP41159 167 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 MORN5Q5VZ52 161 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 PATE2Q6UY27 113 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 OR8A1Q8NGG7 326 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 MEGF9Q9H1U4 602 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 TMEM14CQ9P0S9 112 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 C8orf86Q6ZUL3 223 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 TRAV9-1A0A075B6T8 112 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 LINC00477Q96M19 166 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 VAMP8Q9BV40 100 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 PRDM13Q9H4Q3 707 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 Q86TA4 180 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 LYPD6BQ8NI32 183 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 LY96Q9Y6Y9 160 aa11.31□□□□□ -0.6
PDLIM2-201ENST00000265810 TMEM190Q8WZ59 177 aa11.3□□□□□ -0.6
PDLIM2-201ENST00000265810 KCNS1Q96KK3 526 aa11.3□□□□□ -0.6
PDLIM2-201ENST00000265810 DEFB131AP59861 70 aa11.3□□□□□ -0.6
PDLIM2-201ENST00000265810 MAP1LC3AQ9H492 121 aa11.3□□□□□ -0.6
PDLIM2-201ENST00000265810 COLCA2A8K830 154 aa11.3□□□□□ -0.6
PDLIM2-201ENST00000265810 BTF3P20290 206 aaKnown RBP11.3□□□□□ -0.6
PDLIM2-201ENST00000265810 DIRC3C9JPN6 131 aa11.3□□□□□ -0.6
PDLIM2-201ENST00000265810 FXYD7P58549 80 aa11.3□□□□□ -0.6
PDLIM2-201ENST00000265810 MAP1LC3CQ9BXW4 147 aa11.3□□□□□ -0.6
PDLIM2-201ENST00000265810 PRR31Q5SQ13 230 aa11.29□□□□□ -0.6
PDLIM2-201ENST00000265810 TMEM183AQ8IXX5 376 aa11.29□□□□□ -0.6
PDLIM2-201ENST00000265810 C3orf56Q8N813 242 aa11.29□□□□□ -0.6
PDLIM2-201ENST00000265810 LINC00587B1AMM8 73 aa11.29□□□□□ -0.6
PDLIM2-201ENST00000265810 EMP1P54849 157 aa11.29□□□□□ -0.6
PDLIM2-201ENST00000265810 AJUBAQ96IF1 538 aa11.29□□□□□ -0.6
PDLIM2-201ENST00000265810 IGHV7-4-1A0A0J9YVY3 117 aa11.29□□□□□ -0.6
PDLIM2-201ENST00000265810 HOXD3P31249 432 aaPredicted RBP11.29□□□□□ -0.6
PDLIM2-201ENST00000265810 GOLT1BQ9Y3E0 138 aa11.29□□□□□ -0.6
PDLIM2-201ENST00000265810 TRBV24-1A0A075B6N3 115 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 SH2D1AO60880 128 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 ZNF414Q96IQ9 312 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 MTORP42345 2549 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 CRYGBP07316 175 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 FOXL1Q12952 345 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 Q6ZN92 141 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 GTSCR1Q86UQ5 136 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 H3BVH4 76 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 LGALS1P09382 135 aaKnown RBP11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 FOXE3Q13461 319 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 EBI3Q14213 229 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 MYOZ3Q8TDC0 251 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 PRELID3AQ96N28 172 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 HSPB8Q9UJY1 196 aa11.28□□□□□ -0.6
PDLIM2-201ENST00000265810 OR11H12B2RN74 326 aa11.27□□□□□ -0.6
PDLIM2-201ENST00000265810 HLA-DMBP28068 263 aa11.27□□□□□ -0.6
PDLIM2-201ENST00000265810 MRPL27Q9P0M9 148 aaKnown RBP11.27□□□□□ -0.6
PDLIM2-201ENST00000265810 A0A1B0GW15 77 aa11.26□□□□□ -0.61
PDLIM2-201ENST00000265810 SMPXQ9UHP9 88 aa11.26□□□□□ -0.61
PDLIM2-201ENST00000265810 AKAP13Q12802 2813 aa11.26□□□□□ -0.61
PDLIM2-201ENST00000265810 TMEM191AQ9H0A3 160 aa11.26□□□□□ -0.61
PDLIM2-201ENST00000265810 PRO1933Q9H354 126 aa11.26□□□□□ -0.61
PDLIM2-201ENST00000265810 LEPROTL1O95214 131 aa11.26□□□□□ -0.61
PDLIM2-201ENST00000265810 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
PDLIM2-201ENST00000265810 REC114Q7Z4M0 266 aa11.26□□□□□ -0.61
PDLIM2-201ENST00000265810 TANC2Q9HCD6 1990 aa11.26□□□□□ -0.61
PDLIM2-201ENST00000265810 AVPP01185 164 aa11.25□□□□□ -0.61
PDLIM2-201ENST00000265810 ADMP35318 185 aa11.25□□□□□ -0.61
PDLIM2-201ENST00000265810 LYZL1Q6UWQ5 148 aa11.25□□□□□ -0.61
PDLIM2-201ENST00000265810 C8orf49Q96NF6 230 aa11.25□□□□□ -0.61
PDLIM2-201ENST00000265810 RPL35AP18077 110 aaKnown RBP11.25□□□□□ -0.61
PDLIM2-201ENST00000265810 TMEM75Q8N9X5 138 aa11.25□□□□□ -0.61
PDLIM2-201ENST00000265810 NUP35Q8NFH5 326 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms