RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 TTTY13Q9BZ97 58 aa12.96□□□□□ -0.34
ZNF541-201ENST00000263351 RHOGP84095 191 aa12.95□□□□□ -0.34
ZNF541-201ENST00000263351 LINC01545Q5VT33 79 aa12.95□□□□□ -0.34
ZNF541-201ENST00000263351 FA2HQ7L5A8 372 aa12.95□□□□□ -0.34
ZNF541-201ENST00000263351 IGHV3-66A0A0C4DH42 116 aa12.95□□□□□ -0.34
ZNF541-201ENST00000263351 ASCL5Q7RTU5 278 aa12.95□□□□□ -0.34
ZNF541-201ENST00000263351 C18orf15Q96N68 181 aa12.95□□□□□ -0.34
ZNF541-201ENST00000263351 VGLL1Q99990 258 aa12.95□□□□□ -0.34
ZNF541-201ENST00000263351 SCNM1Q9BWG6 230 aa12.95□□□□□ -0.34
ZNF541-201ENST00000263351 TMEM14CQ9P0S9 112 aa12.95□□□□□ -0.34
ZNF541-201ENST00000263351 NPIPB5A8MRT5 1133 aa12.94□□□□□ -0.34
ZNF541-201ENST00000263351 F8W735 103 aaPredicted RBP12.94□□□□□ -0.34
ZNF541-201ENST00000263351 SH2D1AO60880 128 aa12.94□□□□□ -0.34
ZNF541-201ENST00000263351 S100A7P31151 101 aa12.94□□□□□ -0.34
ZNF541-201ENST00000263351 CACNG7P62955 275 aa12.94□□□□□ -0.34
ZNF541-201ENST00000263351 SOX21Q9Y651 276 aaPredicted RBP12.94□□□□□ -0.34
ZNF541-201ENST00000263351 DEFB125Q8N687 156 aa12.94□□□□□ -0.34
ZNF541-201ENST00000263351 JKAMPQ9P055 326 aa12.94□□□□□ -0.34
ZNF541-201ENST00000263351 K7EMI3 77 aa12.93□□□□□ -0.34
ZNF541-201ENST00000263351 K7EP13 123 aa12.93□□□□□ -0.34
ZNF541-201ENST00000263351 GNG7O60262 68 aa12.93□□□□□ -0.34
ZNF541-201ENST00000263351 PET117Q6UWS5 81 aa12.93□□□□□ -0.34
ZNF541-201ENST00000263351 Q6ZQT7 251 aa12.93□□□□□ -0.34
ZNF541-201ENST00000263351 FANCD2OSQ96PS1 177 aa12.93□□□□□ -0.34
ZNF541-201ENST00000263351 CUBNO60494 3623 aa12.93□□□□□ -0.34
ZNF541-201ENST00000263351 LY6LH3BQJ8 138 aa12.93□□□□□ -0.34
ZNF541-201ENST00000263351 NPYP01303 97 aa12.93□□□□□ -0.34
ZNF541-201ENST00000263351 EGR2P11161 476 aaPredicted RBP12.93□□□□□ -0.34
ZNF541-201ENST00000263351 GATA1P15976 413 aaPredicted RBP12.93□□□□□ -0.34
ZNF541-201ENST00000263351 GPR183P32249 361 aa12.93□□□□□ -0.34
ZNF541-201ENST00000263351 RIGQ13278 110 aa12.92□□□□□ -0.34
ZNF541-201ENST00000263351 ZNF575Q86XF7 245 aa12.92□□□□□ -0.34
ZNF541-201ENST00000263351 HSPB8Q9UJY1 196 aa12.92□□□□□ -0.34
ZNF541-201ENST00000263351 APOBEC3AP31941 199 aaPredicted RBP12.92□□□□□ -0.34
ZNF541-201ENST00000263351 ERCC8Q13216 396 aa12.92□□□□□ -0.34
ZNF541-201ENST00000263351 ZNF672Q499Z4 452 aaPredicted RBP12.92□□□□□ -0.34
ZNF541-201ENST00000263351 MRPL51Q4U2R6 128 aaKnown RBP12.92□□□□□ -0.34
ZNF541-201ENST00000263351 PCP2Q8IVA1 136 aa12.92□□□□□ -0.34
ZNF541-201ENST00000263351 CRYBG3Q68DQ2 2970 aa12.92□□□□□ -0.34
ZNF541-201ENST00000263351 CHD8Q9HCK8 2581 aa12.92□□□□□ -0.34
ZNF541-201ENST00000263351 IGHV3-49A0A0A0MS15 119 aa12.91□□□□□ -0.34
ZNF541-201ENST00000263351 NCBP2LA6PVI3 153 aaKnown RBP12.91□□□□□ -0.34
ZNF541-201ENST00000263351 PRELID3AQ96N28 172 aa12.91□□□□□ -0.34
ZNF541-201ENST00000263351 NCOR2Q9Y618 2525 aa12.91□□□□□ -0.34
ZNF541-201ENST00000263351 FGF6P10767 208 aa12.91□□□□□ -0.34
ZNF541-201ENST00000263351 EVI2AP22794 236 aa12.91□□□□□ -0.34
ZNF541-201ENST00000263351 NHLH1Q02575 133 aa12.91□□□□□ -0.34
ZNF541-201ENST00000263351 RNF182Q8N6D2 247 aa12.91□□□□□ -0.34
ZNF541-201ENST00000263351 RAB37Q96AX2 223 aa12.91□□□□□ -0.34
ZNF541-201ENST00000263351 JMJD8Q96S16 334 aa12.91□□□□□ -0.34
ZNF541-201ENST00000263351 DKK2Q9UBU2 259 aa12.91□□□□□ -0.34
ZNF541-201ENST00000263351 RABAC1Q9UI14 185 aa12.91□□□□□ -0.34
ZNF541-201ENST00000263351 FAM231BA6NCW3 169 aa12.9□□□□□ -0.34
ZNF541-201ENST00000263351 PRAC2D3DTV9 90 aa12.9□□□□□ -0.34
ZNF541-201ENST00000263351 NBR2O15453 112 aa12.9□□□□□ -0.34
ZNF541-201ENST00000263351 OR10AG1Q8NH19 301 aa12.9□□□□□ -0.34
ZNF541-201ENST00000263351 CFHR4Q92496 578 aa12.9□□□□□ -0.34
ZNF541-201ENST00000263351 TMEM189A5PLL7 270 aa12.9□□□□□ -0.34
ZNF541-201ENST00000263351 COX8AP10176 69 aa12.9□□□□□ -0.34
ZNF541-201ENST00000263351 THYN1Q9P016 225 aa12.9□□□□□ -0.34
ZNF541-201ENST00000263351 SMAD5-AS1Q9Y6J3 95 aa12.9□□□□□ -0.34
ZNF541-201ENST00000263351 TRAV30A0A087WSZ9 112 aa12.89□□□□□ -0.35
ZNF541-201ENST00000263351 SPRY2O43597 315 aa12.89□□□□□ -0.35
ZNF541-201ENST00000263351 SAP30O75446 220 aa12.89□□□□□ -0.35
ZNF541-201ENST00000263351 IGHG4P01861 327 aa12.89□□□□□ -0.35
ZNF541-201ENST00000263351 CD3EP07766 207 aa12.89□□□□□ -0.35
ZNF541-201ENST00000263351 TWIST1Q15672 202 aa12.89□□□□□ -0.35
ZNF541-201ENST00000263351 CST9LQ9H4G1 147 aa12.89□□□□□ -0.35
ZNF541-201ENST00000263351 C7orf71A4D174 169 aa12.89□□□□□ -0.35
ZNF541-201ENST00000263351 CT45A10P0DMU9 189 aa12.89□□□□□ -0.35
ZNF541-201ENST00000263351 WI2-2373I1.2A0A1W2PRP0 233 aa12.88□□□□□ -0.35
ZNF541-201ENST00000263351 HIST1H1AQ02539 215 aaPredicted RBP12.88□□□□□ -0.35
ZNF541-201ENST00000263351 FAM162BQ5T6X4 162 aa12.88□□□□□ -0.35
ZNF541-201ENST00000263351 FAM104BQ5XKR9 115 aa12.88□□□□□ -0.35
ZNF541-201ENST00000263351 CELSR2Q9HCU4 2923 aa12.88□□□□□ -0.35
ZNF541-201ENST00000263351 NMUP48645 174 aa12.88□□□□□ -0.35
ZNF541-201ENST00000263351 CSMD2Q7Z408 3487 aa12.88□□□□□ -0.35
ZNF541-201ENST00000263351 IGF2-ASQ6U949 168 aa12.87□□□□□ -0.35
ZNF541-201ENST00000263351 SPTBN4Q9H254 2564 aa12.87□□□□□ -0.35
ZNF541-201ENST00000263351 CSN1S1P47710 185 aa12.87□□□□□ -0.35
ZNF541-201ENST00000263351 C12orf54Q6X4T0 127 aa12.87□□□□□ -0.35
ZNF541-201ENST00000263351 VSTM5A8MXK1 200 aa12.86□□□□□ -0.35
ZNF541-201ENST00000263351 B9A039 149 aa12.86□□□□□ -0.35
ZNF541-201ENST00000263351 K7EQM0 130 aa12.86□□□□□ -0.35
ZNF541-201ENST00000263351 ZNF207O43670 478 aaKnown RBP12.86□□□□□ -0.35
ZNF541-201ENST00000263351 NDUFS7O75251 213 aa12.86□□□□□ -0.35
ZNF541-201ENST00000263351 TNFRSF14Q92956 283 aa12.86□□□□□ -0.35
ZNF541-201ENST00000263351 PRR25Q96S07 402 aa12.86□□□□□ -0.35
ZNF541-201ENST00000263351 TMEM97Q5BJF2 176 aa12.86□□□□□ -0.35
ZNF541-201ENST00000263351 AAMDCQ9H7C9 122 aa12.86□□□□□ -0.35
ZNF541-201ENST00000263351 DPM3Q9P2X0 92 aa12.86□□□□□ -0.35
ZNF541-201ENST00000263351 IGLV11-55A0A075B6I3 123 aa12.85□□□□□ -0.35
ZNF541-201ENST00000263351 IGKV2D-26A0A0A0MRZ7 120 aa12.85□□□□□ -0.35
ZNF541-201ENST00000263351 ORM1P02763 201 aa12.85□□□□□ -0.35
ZNF541-201ENST00000263351 CKS2P33552 79 aa12.85□□□□□ -0.35
ZNF541-201ENST00000263351 PAX2Q02962 417 aa12.85□□□□□ -0.35
ZNF541-201ENST00000263351 C5orf64Q2M2E5 130 aa12.85□□□□□ -0.35
ZNF541-201ENST00000263351 H3BUT2 72 aa12.85□□□□□ -0.35
ZNF541-201ENST00000263351 TMEM11P17152 192 aa12.85□□□□□ -0.35
ZNF541-201ENST00000263351 CDKN1BP46527 198 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms