RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 Q9H3A6 140 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 NAV2Q8IVL1 2488 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 TRAV8-1A0A0A6YYK1 113 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 GAGE12BA1L429 117 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 C9JCJ5 164 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 HSBP1L1C9JCN9 74 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 TAX1BP3O14907 124 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 MSMBP08118 114 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 PIFOQ8TCI5 191 aa10.61□□□□□ -0.71
VMP1-201ENST00000262291 MRPL27Q9P0M9 148 aaKnown RBP10.61□□□□□ -0.71
VMP1-201ENST00000262291 CHD6Q8TD26 2715 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 HLA-DRB1P01911 266 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 GPR183P32249 361 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 C15orf32Q32M92 178 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 TSKUQ8WUA8 353 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 ARL2-SNX15V9GYD0 113 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 MUC21A0A0G2JKD1 596 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 MUC21A0A140T8X8 626 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 NUDT3O95989 172 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 PLP1P60201 277 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 RHOGP84095 191 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 MUC21Q5SSG8 566 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 HIST2H2BCQ6DN03 193 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 EPDR1Q9UM22 224 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 DOPEY2Q9Y3R5 2298 aa10.6□□□□□ -0.71
VMP1-201ENST00000262291 C5orf56Q8N8D9 126 aa10.59□□□□□ -0.71
VMP1-201ENST00000262291 V9GYV3 84 aa10.59□□□□□ -0.71
VMP1-201ENST00000262291 IGHV3OR16-13A0A075B7E8 117 aa10.59□□□□□ -0.71
VMP1-201ENST00000262291 IGHV3-74A0A0B4J1X5 117 aa10.59□□□□□ -0.71
VMP1-201ENST00000262291 H3BUX3 64 aa10.59□□□□□ -0.71
VMP1-201ENST00000262291 K7ERU9 68 aa10.59□□□□□ -0.71
VMP1-201ENST00000262291 AMY1AP04745 511 aa10.59□□□□□ -0.71
VMP1-201ENST00000262291 MYCNOSP40205 109 aa10.59□□□□□ -0.71
VMP1-201ENST00000262291 RPEL1Q2QD12 228 aa10.59□□□□□ -0.71
VMP1-201ENST00000262291 IGHV3-66A0A0C4DH42 116 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 NDUFS8O00217 210 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 Q6ZS46 218 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 SPATA12Q7Z6I5 190 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 STXBP6Q8NFX7 210 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 SVIPQ8NHG7 77 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 SHANK2-AS3Q9BTD1 123 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 TRAV9-2A0A087WT02 112 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 IGHV3-49A0A0A0MS15 119 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 BMPR1BO00238 502 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 CTSGP08311 255 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 IGFL4Q6B9Z1 124 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 NBPF19A0A087WUL8 3843 aa10.58□□□□□ -0.72
VMP1-201ENST00000262291 H3BRN7 92 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 ZNF207O43670 478 aaKnown RBP10.57□□□□□ -0.72
VMP1-201ENST00000262291 CLEC3BP05452 202 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 UBE2G1P62253 170 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 PSG9Q00887 426 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 IBA57Q5T440 356 aaKnown RBP10.57□□□□□ -0.72
VMP1-201ENST00000262291 EBLN2Q6P2I7 272 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 CLEC19AQ6UXS0 136 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 CDC42EP3Q9UKI2 254 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 GOLT1AQ6ZVE7 132 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 THYN1Q9P016 225 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 TRAV8-6A0A0B4J262 113 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 WI2-2373I1.2A0A1W2PRP0 233 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 M0R3E3 92 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 TMEM136Q6ZRR5 245 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 LCNL1Q6ZST4 164 aa10.57□□□□□ -0.72
VMP1-201ENST00000262291 TENM4Q6N022 2769 aa10.56□□□□□ -0.72
VMP1-201ENST00000262291 RNF223E7ERA6 249 aa10.56□□□□□ -0.72
VMP1-201ENST00000262291 HIST1H1EP10412 219 aaKnown RBP10.56□□□□□ -0.72
VMP1-201ENST00000262291 BLCAPP62952 87 aa10.56□□□□□ -0.72
VMP1-201ENST00000262291 FAM110DQ8TAY7 271 aaPredicted RBP10.56□□□□□ -0.72
VMP1-201ENST00000262291 SMIM12Q96EX1 92 aa10.56□□□□□ -0.72
VMP1-201ENST00000262291 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
VMP1-201ENST00000262291 CLEC5AQ9NY25 188 aa10.56□□□□□ -0.72
VMP1-201ENST00000262291 TLN2Q9Y4G6 2542 aa10.56□□□□□ -0.72
VMP1-201ENST00000262291 hDV102S1A0JD36 115 aa10.56□□□□□ -0.72
VMP1-201ENST00000262291 PMCHL1Q16048 86 aa10.56□□□□□ -0.72
VMP1-201ENST00000262291 LINC00322Q6ZN03 302 aaPredicted RBP10.56□□□□□ -0.72
VMP1-201ENST00000262291 BPIFA4PQ86YQ2 179 aa10.56□□□□□ -0.72
VMP1-201ENST00000262291 MOB4Q9Y3A3 225 aa10.56□□□□□ -0.72
VMP1-201ENST00000262291 TCRAP04437 139 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 OR10J3Q5JRS4 329 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 PRNTQ86SH4 94 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 MCRIP2Q9BUT9 160 aaKnown RBP10.55□□□□□ -0.72
VMP1-201ENST00000262291 LY96Q9Y6Y9 160 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 FAM181BA6NEQ2 426 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 B4DSR2 109 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 M0R2Z0 102 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 HSBP1O75506 76 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 TGFAP01135 160 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 BVES-AS1Q5T3Y7 98 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 C5orf17Q8NAS9 161 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 CCDC140Q96MF4 163 aa10.55□□□□□ -0.72
VMP1-201ENST00000262291 TRBV19A0A075B6N1 114 aa10.54□□□□□ -0.72
VMP1-201ENST00000262291 SLAQ13239 276 aa10.54□□□□□ -0.72
VMP1-201ENST00000262291 RNASEKQ6P5S7 137 aaKnown RBP10.54□□□□□ -0.72
VMP1-201ENST00000262291 CIARTQ8N365 385 aaPredicted RBP10.54□□□□□ -0.72
VMP1-201ENST00000262291 NAA38Q9BRA0 125 aaKnown RBP10.54□□□□□ -0.72
VMP1-201ENST00000262291 APCP25054 2843 aa10.54□□□□□ -0.72
VMP1-201ENST00000262291 TMEM95Q3KNT9 176 aa10.54□□□□□ -0.72
VMP1-201ENST00000262291 ZNF502Q8TBZ5 544 aa10.54□□□□□ -0.72
VMP1-201ENST00000262291 TEX15Q9BXT5 2789 aa10.54□□□□□ -0.72
VMP1-201ENST00000262291 CCDC168Q8NDH2 2452 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms