RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 GALR1P47211 349 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 C16orf54Q6UWD8 224 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 C1QL4Q86Z23 238 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 GLMPQ8WWB7 406 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 SFRP2Q96HF1 295 aa13.29□□□□□ -0.28
SRSF1-201ENST00000258962 ISLRO14498 428 aa13.28□□□□□ -0.28
SRSF1-201ENST00000258962 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.28□□□□□ -0.28
SRSF1-201ENST00000258962 GPHB5Q86YW7 130 aa13.28□□□□□ -0.28
SRSF1-201ENST00000258962 OR10G8Q8NGN5 311 aa13.28□□□□□ -0.28
SRSF1-201ENST00000258962 SMIM12Q96EX1 92 aa13.28□□□□□ -0.28
SRSF1-201ENST00000258962 KLF12Q9Y4X4 402 aa13.28□□□□□ -0.28
SRSF1-201ENST00000258962 FBN3Q75N90 2809 aa13.27□□□□□ -0.28
SRSF1-201ENST00000258962 IGHV4OR15-8A0A075B7B6 117 aa13.27□□□□□ -0.29
SRSF1-201ENST00000258962 A0A087WW49 117 aa13.27□□□□□ -0.29
SRSF1-201ENST00000258962 ZNF320A2RRD8 509 aa13.27□□□□□ -0.29
SRSF1-201ENST00000258962 ADARB2-AS1A8MUL3 147 aa13.27□□□□□ -0.29
SRSF1-201ENST00000258962 ZNF253O75346 499 aa13.27□□□□□ -0.29
SRSF1-201ENST00000258962 UBE2G1P62253 170 aa13.27□□□□□ -0.29
SRSF1-201ENST00000258962 TMEM183BQ1AE95 376 aa13.27□□□□□ -0.29
SRSF1-201ENST00000258962 C18orf65Q6ZTR6 163 aa13.27□□□□□ -0.29
SRSF1-201ENST00000258962 CMTM2Q8TAZ6 248 aa13.27□□□□□ -0.29
SRSF1-201ENST00000258962 BIN3Q9NQY0 253 aa13.27□□□□□ -0.29
SRSF1-201ENST00000258962 URGCP-MRPS24S4R325 110 aa13.27□□□□□ -0.29
SRSF1-201ENST00000258962 NBEAL1Q6ZS30 2694 aa13.26□□□□□ -0.29
SRSF1-201ENST00000258962 M0R3E3 92 aa13.26□□□□□ -0.29
SRSF1-201ENST00000258962 RPS10P46783 165 aaKnown RBP13.26□□□□□ -0.29
SRSF1-201ENST00000258962 RPL19P84098 196 aaKnown RBP13.26□□□□□ -0.29
SRSF1-201ENST00000258962 PSG9Q00887 426 aa13.26□□□□□ -0.29
SRSF1-201ENST00000258962 TM4SF20Q53R12 229 aa13.26□□□□□ -0.29
SRSF1-201ENST00000258962 FAM210BQ96KR6 192 aa13.26□□□□□ -0.29
SRSF1-201ENST00000258962 LOC105371267A0A1B0GV96 52 aa13.25□□□□□ -0.29
SRSF1-201ENST00000258962 ZNF785A8K8V0 405 aa13.25□□□□□ -0.29
SRSF1-201ENST00000258962 K7EMT4 169 aa13.25□□□□□ -0.29
SRSF1-201ENST00000258962 K7EQM0 130 aa13.25□□□□□ -0.29
SRSF1-201ENST00000258962 PFN1P07737 140 aaKnown RBP13.25□□□□□ -0.29
SRSF1-201ENST00000258962 EDN2P20800 178 aa13.25□□□□□ -0.29
SRSF1-201ENST00000258962 RPEL1Q2QD12 228 aa13.25□□□□□ -0.29
SRSF1-201ENST00000258962 FAM106AQ4KMX7 169 aa13.25□□□□□ -0.29
SRSF1-201ENST00000258962 FMC1Q96HJ9 113 aa13.25□□□□□ -0.29
SRSF1-201ENST00000258962 AAMDCQ9H7C9 122 aa13.25□□□□□ -0.29
SRSF1-201ENST00000258962 ZNF331Q9NQX6 463 aaPredicted RBP13.25□□□□□ -0.29
SRSF1-201ENST00000258962 DAZ1Q9NQZ3 744 aaKnown RBP13.25□□□□□ -0.29
SRSF1-201ENST00000258962 TRRAPQ9Y4A5 3859 aa13.25□□□□□ -0.29
SRSF1-201ENST00000258962 TRAV9-1A0A075B6T8 112 aa13.24□□□□□ -0.29
SRSF1-201ENST00000258962 IGHV7-4-1A0A0J9YVY3 117 aa13.24□□□□□ -0.29
SRSF1-201ENST00000258962 HLA-DMBP28068 263 aa13.24□□□□□ -0.29
SRSF1-201ENST00000258962 CDX1P47902 265 aaPredicted RBP13.24□□□□□ -0.29
SRSF1-201ENST00000258962 GOLT1AQ6ZVE7 132 aa13.24□□□□□ -0.29
SRSF1-201ENST00000258962 ARL6IP6Q8N6S5 226 aa13.24□□□□□ -0.29
SRSF1-201ENST00000258962 SGK494Q96LW2 274 aa13.24□□□□□ -0.29
SRSF1-201ENST00000258962 PYGO2Q9BRQ0 406 aa13.24□□□□□ -0.29
SRSF1-201ENST00000258962 PKD1L1Q8TDX9 2849 aa13.24□□□□□ -0.29
SRSF1-201ENST00000258962 GCGP01275 180 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 IGLV2-11P01706 119 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 PF4P02776 101 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 PRB4P10163 310 aaPredicted RBP13.23□□□□□ -0.29
SRSF1-201ENST00000258962 OR5I1Q13606 314 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 IGFL4Q6B9Z1 124 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 NHLRC2Q8NBF2 726 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 OSTCQ9NRP0 149 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 TRAV8-1A0A0A6YYK1 113 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 TGIF2-C20orf24A0A0A6YYL0 155 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 SERTM2A0A1B0GWG4 89 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 DIRC3C9JPN6 131 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 S100A6P06703 90 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 MEOX2P50222 304 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 ERVFC1-1P60608 527 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 REC114Q7Z4M0 266 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 BAGE2Q86Y30 109 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 KLHL30-AS1Q8NEE0 82 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 C4orf3Q8WVX3 66 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 SMPXQ9UHP9 88 aa13.23□□□□□ -0.29
SRSF1-201ENST00000258962 TRAV8-2A0A0B4J237 113 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 A0A1W2PS18 150 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 TMEM213A2RRL7 107 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 CHEK1O14757 476 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 CXCL1P09341 107 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 HOXD3P31249 432 aaPredicted RBP13.22□□□□□ -0.29
SRSF1-201ENST00000258962 DEFB136Q30KP8 78 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 C8orf86Q6ZUL3 223 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 Q86TA4 180 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 GRAMD2BQ96HH9 432 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 SLC50A1Q9BRV3 221 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 RHPN1-AS1Q9BWJ2 59 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 UFC1Q9Y3C8 167 aa13.22□□□□□ -0.29
SRSF1-201ENST00000258962 TRBV6-1A0A0K0K1D8 114 aa13.21□□□□□ -0.29
SRSF1-201ENST00000258962 A8MWP6 167 aa13.21□□□□□ -0.29
SRSF1-201ENST00000258962 LTAP01374 205 aa13.21□□□□□ -0.29
SRSF1-201ENST00000258962 CSN1S1P47710 185 aa13.21□□□□□ -0.29
SRSF1-201ENST00000258962 TMEM75Q8N9X5 138 aa13.21□□□□□ -0.29
SRSF1-201ENST00000258962 MLST8Q9BVC4 326 aa13.21□□□□□ -0.29
SRSF1-201ENST00000258962 SRD5A3Q9H8P0 318 aa13.21□□□□□ -0.29
SRSF1-201ENST00000258962 VWFP04275 2813 aa13.21□□□□□ -0.3
SRSF1-201ENST00000258962 FBLL1A6NHQ2 334 aaKnown RBP13.2□□□□□ -0.3
SRSF1-201ENST00000258962 LGALS9O00182 355 aa13.2□□□□□ -0.3
SRSF1-201ENST00000258962 MGST1P10620 155 aaKnown RBP13.2□□□□□ -0.3
SRSF1-201ENST00000258962 SYNJ2BPP57105 145 aa13.2□□□□□ -0.3
SRSF1-201ENST00000258962 RNF182Q8N6D2 247 aa13.2□□□□□ -0.3
SRSF1-201ENST00000258962 IL36BQ9NZH7 164 aa13.2□□□□□ -0.3
SRSF1-201ENST00000258962 FAM3BP58499 235 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms