RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 PRR27Q6MZM9 219 aa14.52□□□□□ -0.08
TRIM47-201ENST00000254816 BAGE2Q86Y30 109 aa14.52□□□□□ -0.08
TRIM47-201ENST00000254816 SMAD5-AS1Q9Y6J3 95 aa14.52□□□□□ -0.08
TRIM47-201ENST00000254816 OTOGQ6ZRI0 2925 aa14.52□□□□□ -0.09
TRIM47-201ENST00000254816 CRISP2P16562 243 aa14.52□□□□□ -0.09
TRIM47-201ENST00000254816 LINC00310P59036 64 aa14.52□□□□□ -0.09
TRIM47-201ENST00000254816 FAM181BA6NEQ2 426 aa14.51□□□□□ -0.09
TRIM47-201ENST00000254816 BUB3O43684 328 aa14.51□□□□□ -0.09
TRIM47-201ENST00000254816 PKIAP61925 76 aa14.51□□□□□ -0.09
TRIM47-201ENST00000254816 OTORQ9NRC9 128 aa14.51□□□□□ -0.09
TRIM47-201ENST00000254816 NAT8BQ9UHF3 227 aa14.51□□□□□ -0.09
TRIM47-201ENST00000254816 NOTCH2Q04721 2471 aa14.5□□□□□ -0.09
TRIM47-201ENST00000254816 RPL7P18124 248 aaKnown RBP14.5□□□□□ -0.09
TRIM47-201ENST00000254816 RAB4BP61018 213 aa14.5□□□□□ -0.09
TRIM47-201ENST00000254816 SIGLEC15Q6ZMC9 328 aa14.5□□□□□ -0.09
TRIM47-201ENST00000254816 C5orf17Q8NAS9 161 aa14.5□□□□□ -0.09
TRIM47-201ENST00000254816 CMTM2Q8TAZ6 248 aa14.5□□□□□ -0.09
TRIM47-201ENST00000254816 METTL26Q96S19 204 aa14.5□□□□□ -0.09
TRIM47-201ENST00000254816 SMIM27A0A1W2PRY6 76 aa14.5□□□□□ -0.09
TRIM47-201ENST00000254816 KIAA1644Q3SXP7 199 aa14.5□□□□□ -0.09
TRIM47-201ENST00000254816 TMEM86BQ8N661 226 aa14.5□□□□□ -0.09
TRIM47-201ENST00000254816 GNB1LQ9BYB4 327 aa14.5□□□□□ -0.09
TRIM47-201ENST00000254816 TSTD3H0UI37 97 aa14.49□□□□□ -0.09
TRIM47-201ENST00000254816 SERF1AO75920 110 aa14.49□□□□□ -0.09
TRIM47-201ENST00000254816 TMEM136Q6ZRR5 245 aa14.49□□□□□ -0.09
TRIM47-201ENST00000254816 RNF24Q9Y225 148 aa14.49□□□□□ -0.09
TRIM47-201ENST00000254816 TCRAP04437 139 aa14.49□□□□□ -0.09
TRIM47-201ENST00000254816 DEFA6Q01524 100 aa14.49□□□□□ -0.09
TRIM47-201ENST00000254816 Q8N2B8 174 aa14.49□□□□□ -0.09
TRIM47-201ENST00000254816 PEF1Q9UBV8 284 aaKnown RBP14.49□□□□□ -0.09
TRIM47-201ENST00000254816 NDUFA4O00483 81 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 UBE2G1P62253 170 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 IGFL4Q6B9Z1 124 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 ATG101Q9BSB4 218 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 LY6G6DO95868 133 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 CD33P20138 364 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 DDTP30046 118 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 TMEM183BQ1AE95 376 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 BAGE3Q86Y29 109 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 ZNF664Q8N3J9 261 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 NUDT10Q8NFP7 164 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 NUDT11Q96G61 164 aa14.48□□□□□ -0.09
TRIM47-201ENST00000254816 TMEM89A2RUT3 159 aa14.47□□□□□ -0.09
TRIM47-201ENST00000254816 M0R3E3 92 aa14.47□□□□□ -0.09
TRIM47-201ENST00000254816 GATCO43716 136 aaKnown RBP14.47□□□□□ -0.09
TRIM47-201ENST00000254816 SCGB1D1O95968 90 aa14.47□□□□□ -0.09
TRIM47-201ENST00000254816 S100A7P31151 101 aa14.46□□□□□ -0.09
TRIM47-201ENST00000254816 FOXE3Q13461 319 aa14.46□□□□□ -0.09
TRIM47-201ENST00000254816 Q6ZSV7 163 aa14.46□□□□□ -0.09
TRIM47-201ENST00000254816 Q71RC1 249 aaPredicted RBP14.46□□□□□ -0.09
TRIM47-201ENST00000254816 U3KQE9 123 aa14.46□□□□□ -0.09
TRIM47-201ENST00000254816 NF1P21359 2839 aa14.46□□□□□ -0.09
TRIM47-201ENST00000254816 TRAV8-1A0A0A6YYK1 113 aa14.46□□□□□ -0.09
TRIM47-201ENST00000254816 WDR73Q6P4I2 378 aa14.46□□□□□ -0.09
TRIM47-201ENST00000254816 GOLT1AQ6ZVE7 132 aa14.46□□□□□ -0.09
TRIM47-201ENST00000254816 IZUMO1RA6ND01 250 aa14.45□□□□□ -0.1
TRIM47-201ENST00000254816 ZNF785A8K8V0 405 aa14.45□□□□□ -0.1
TRIM47-201ENST00000254816 ELANEP08246 267 aa14.45□□□□□ -0.1
TRIM47-201ENST00000254816 HLA-DMBP28068 263 aa14.45□□□□□ -0.1
TRIM47-201ENST00000254816 PDE6HQ13956 83 aa14.45□□□□□ -0.1
TRIM47-201ENST00000254816 HIST2H2BDQ6DRA6 164 aa14.45□□□□□ -0.1
TRIM47-201ENST00000254816 C14orf144Q96I85 54 aa14.45□□□□□ -0.1
TRIM47-201ENST00000254816 MTORP42345 2549 aa14.45□□□□□ -0.1
TRIM47-201ENST00000254816 RPL19P84098 196 aaKnown RBP14.45□□□□□ -0.1
TRIM47-201ENST00000254816 FAM231DQ6ZW35 169 aa14.45□□□□□ -0.1
TRIM47-201ENST00000254816 LYPD1Q8N2G4 141 aa14.45□□□□□ -0.1
TRIM47-201ENST00000254816 MT-ND6P03923 174 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 EDN2P20800 178 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 KLHDC1Q8N7A1 406 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 ASCL2Q99929 193 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 AAMDCQ9H7C9 122 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 KLF12Q9Y4X4 402 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 SELENOKQ9Y6D0 94 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 SRD5A1P18405 259 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 IQCJQ1A5X6 159 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 TM4SF20Q53R12 229 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 Q6ZWC4 215 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 TMEM190Q8WZ59 177 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 GRAMD2BQ96HH9 432 aa14.44□□□□□ -0.1
TRIM47-201ENST00000254816 PSG9Q00887 426 aa14.43□□□□□ -0.1
TRIM47-201ENST00000254816 LINC00322Q6ZN03 302 aaPredicted RBP14.43□□□□□ -0.1
TRIM47-201ENST00000254816 C18orf65Q6ZTR6 163 aa14.43□□□□□ -0.1
TRIM47-201ENST00000254816 NUP35Q8NFH5 326 aa14.43□□□□□ -0.1
TRIM47-201ENST00000254816 MYOZ3Q8TDC0 251 aa14.43□□□□□ -0.1
TRIM47-201ENST00000254816 SRIP30626 198 aa14.43□□□□□ -0.1
TRIM47-201ENST00000254816 Q0VG73 95 aa14.43□□□□□ -0.1
TRIM47-201ENST00000254816 PRR31Q5SQ13 230 aa14.43□□□□□ -0.1
TRIM47-201ENST00000254816 C1orf194Q5T5A4 169 aa14.43□□□□□ -0.1
TRIM47-201ENST00000254816 SLAQ13239 276 aa14.42□□□□□ -0.1
TRIM47-201ENST00000254816 C16orf54Q6UWD8 224 aa14.42□□□□□ -0.1
TRIM47-201ENST00000254816 FMC1Q96HJ9 113 aa14.42□□□□□ -0.1
TRIM47-201ENST00000254816 GPR82Q96P67 336 aa14.42□□□□□ -0.1
TRIM47-201ENST00000254816 RCHY1Q96PM5 261 aa14.42□□□□□ -0.1
TRIM47-201ENST00000254816 ZNF331Q9NQX6 463 aaPredicted RBP14.42□□□□□ -0.1
TRIM47-201ENST00000254816 TMEM160Q9NX00 188 aa14.42□□□□□ -0.1
TRIM47-201ENST00000254816 NAGKQ9UJ70 344 aa14.42□□□□□ -0.1
TRIM47-201ENST00000254816 DIRC3C9JPN6 131 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 IGLV2-11P01706 119 aa14.41□□□□□ -0.1
TRIM47-201ENST00000254816 HLA-DQA1P01909 254 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms