RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 CT83Q5H943 113 aa14.54□□□□□ -0.08
EFR3A-201ENST00000254624 RHODO00212 210 aa14.53□□□□□ -0.08
EFR3A-201ENST00000254624 DAZAP2Q15038 168 aaPredicted RBP14.53□□□□□ -0.08
EFR3A-201ENST00000254624 FAM120AOSQ5T036 256 aa14.53□□□□□ -0.08
EFR3A-201ENST00000254624 C2orf16Q68DN1 1984 aa14.53□□□□□ -0.08
EFR3A-201ENST00000254624 VPREB3Q9UKI3 123 aa14.53□□□□□ -0.08
EFR3A-201ENST00000254624 ZNF815PA8K554 130 aa14.53□□□□□ -0.08
EFR3A-201ENST00000254624 HOXA3O43365 443 aaPredicted RBP14.53□□□□□ -0.08
EFR3A-201ENST00000254624 IGHV3-53P01767 116 aa14.53□□□□□ -0.08
EFR3A-201ENST00000254624 DIAPH2-AS1Q14236 149 aa14.53□□□□□ -0.08
EFR3A-201ENST00000254624 CSTL1Q9H114 145 aa14.53□□□□□ -0.08
EFR3A-201ENST00000254624 ADORA2A-AS1P86434 159 aa14.53□□□□□ -0.08
EFR3A-201ENST00000254624 TMEM86BQ8N661 226 aa14.53□□□□□ -0.08
EFR3A-201ENST00000254624 CACNA1HO95180 2353 aa14.53□□□□□ -0.08
EFR3A-201ENST00000254624 C8orf86Q6ZUL3 223 aa14.52□□□□□ -0.08
EFR3A-201ENST00000254624 HIST1H2BLQ99880 126 aa14.52□□□□□ -0.08
EFR3A-201ENST00000254624 SPOCK3Q9BQ16 436 aa14.52□□□□□ -0.08
EFR3A-201ENST00000254624 SLC25A20O43772 301 aa14.52□□□□□ -0.08
EFR3A-201ENST00000254624 TDGF1P3P51864 188 aa14.52□□□□□ -0.08
EFR3A-201ENST00000254624 PLEKHB2Q96CS7 222 aa14.52□□□□□ -0.08
EFR3A-201ENST00000254624 ARMS2P0C7Q2 107 aa14.52□□□□□ -0.09
EFR3A-201ENST00000254624 TCTEX1D4Q5JR98 221 aa14.52□□□□□ -0.09
EFR3A-201ENST00000254624 HIST3H2BBQ8N257 126 aa14.52□□□□□ -0.09
EFR3A-201ENST00000254624 LSM4Q9Y4Z0 139 aaKnown RBP14.52□□□□□ -0.09
EFR3A-201ENST00000254624 MST1LQ2TV78 715 aa14.51□□□□□ -0.09
EFR3A-201ENST00000254624 TRPT1Q86TN4 253 aaKnown RBP14.51□□□□□ -0.09
EFR3A-201ENST00000254624 C5orf30Q96GV9 206 aa14.51□□□□□ -0.09
EFR3A-201ENST00000254624 GSN-AS1Q9NRJ2 163 aa14.51□□□□□ -0.09
EFR3A-201ENST00000254624 DOCK9Q9BZ29 2069 aa14.51□□□□□ -0.09
EFR3A-201ENST00000254624 NDUFS7O75251 213 aa14.5□□□□□ -0.09
EFR3A-201ENST00000254624 RASL10AQ92737 203 aa14.5□□□□□ -0.09
EFR3A-201ENST00000254624 CKS1BP61024 79 aa14.5□□□□□ -0.09
EFR3A-201ENST00000254624 CD300EQ496F6 205 aaPredicted RBP14.5□□□□□ -0.09
EFR3A-201ENST00000254624 IGLC1P0CG04 106 aa14.5□□□□□ -0.09
EFR3A-201ENST00000254624 DEFB112Q30KQ8 113 aa14.5□□□□□ -0.09
EFR3A-201ENST00000254624 OR2K2Q8NGT1 345 aa14.5□□□□□ -0.09
EFR3A-201ENST00000254624 LINC00479Q96M42 142 aa14.5□□□□□ -0.09
EFR3A-201ENST00000254624 IGHV7-4-1A0A0J9YVY3 117 aa14.49□□□□□ -0.09
EFR3A-201ENST00000254624 WIPF3A6NGB9 483 aa14.49□□□□□ -0.09
EFR3A-201ENST00000254624 PRSS46E5RG02 174 aa14.49□□□□□ -0.09
EFR3A-201ENST00000254624 KIAA2026Q5HYC2 2103 aa14.48□□□□□ -0.09
EFR3A-201ENST00000254624 LOC105371267A0A1B0GV96 52 aa14.48□□□□□ -0.09
EFR3A-201ENST00000254624 APOC4P55056 127 aa14.48□□□□□ -0.09
EFR3A-201ENST00000254624 TRAV2A0A0B4J234 112 aa14.48□□□□□ -0.09
EFR3A-201ENST00000254624 TMEM238C9JI98 176 aa14.48□□□□□ -0.09
EFR3A-201ENST00000254624 SPTBN1Q01082 2364 aaKnown RBP14.48□□□□□ -0.09
EFR3A-201ENST00000254624 XCL2Q9UBD3 114 aa14.48□□□□□ -0.09
EFR3A-201ENST00000254624 A0A087WWL8 130 aa14.48□□□□□ -0.09
EFR3A-201ENST00000254624 AMN1Q8IY45 258 aa14.48□□□□□ -0.09
EFR3A-201ENST00000254624 IGHV1OR15-1A0A075B7D0 117 aa14.47□□□□□ -0.09
EFR3A-201ENST00000254624 FGF23Q9GZV9 251 aaPredicted RBP14.47□□□□□ -0.09
EFR3A-201ENST00000254624 SPINK13Q1W4C9 94 aa14.47□□□□□ -0.09
EFR3A-201ENST00000254624 FBXL19-AS1Q494R0 122 aa14.47□□□□□ -0.09
EFR3A-201ENST00000254624 SPCS1Q9Y6A9 102 aa14.47□□□□□ -0.09
EFR3A-201ENST00000254624 ROS1P08922 2347 aa14.47□□□□□ -0.09
EFR3A-201ENST00000254624 IGHV4-61A0A0C4DH41 118 aa14.47□□□□□ -0.09
EFR3A-201ENST00000254624 DEFB130BP0DP73 79 aa14.47□□□□□ -0.09
EFR3A-201ENST00000254624 DEFB130AP0DP74 79 aa14.47□□□□□ -0.09
EFR3A-201ENST00000254624 LINC00158P58513 81 aa14.47□□□□□ -0.09
EFR3A-201ENST00000254624 CDKN1BP46527 198 aa14.46□□□□□ -0.09
EFR3A-201ENST00000254624 SEM1Q6ZVN7 128 aa14.46□□□□□ -0.09
EFR3A-201ENST00000254624 C8orf49Q96NF6 230 aa14.46□□□□□ -0.09
EFR3A-201ENST00000254624 AKAP6Q13023 2319 aa14.46□□□□□ -0.09
EFR3A-201ENST00000254624 C10orf105Q8TEF2 133 aa14.46□□□□□ -0.09
EFR3A-201ENST00000254624 CENPVL3A0A0U1RRI6 287 aa14.46□□□□□ -0.09
EFR3A-201ENST00000254624 IGHV4-39P01824 125 aa14.46□□□□□ -0.09
EFR3A-201ENST00000254624 HSD52Q0P140 79 aa14.46□□□□□ -0.09
EFR3A-201ENST00000254624 NPBQ8NG41 125 aa14.46□□□□□ -0.09
EFR3A-201ENST00000254624 NDUFAF3Q9BU61 184 aa14.46□□□□□ -0.09
EFR3A-201ENST00000254624 TSSC4Q9Y5U2 329 aaPredicted RBP14.46□□□□□ -0.09
EFR3A-201ENST00000254624 A8MWV9 139 aa14.46□□□□□ -0.1
EFR3A-201ENST00000254624 TMEM158Q8WZ71 300 aa14.46□□□□□ -0.1
EFR3A-201ENST00000254624 RIPPLY3P57055 190 aa14.45□□□□□ -0.1
EFR3A-201ENST00000254624 SPRNQ5BIV9 151 aa14.45□□□□□ -0.1
EFR3A-201ENST00000254624 FAM231DQ6ZW35 169 aa14.45□□□□□ -0.1
EFR3A-201ENST00000254624 HAPLN4Q86UW8 402 aa14.45□□□□□ -0.1
EFR3A-201ENST00000254624 NHP2Q9NX24 153 aaKnown RBP14.45□□□□□ -0.1
EFR3A-201ENST00000254624 PRR25Q96S07 402 aa14.45□□□□□ -0.1
EFR3A-201ENST00000254624 YLPM1P49750 1951 aaKnown RBP14.45□□□□□ -0.1
EFR3A-201ENST00000254624 IGHV4-59P01825 116 aa14.45□□□□□ -0.1
EFR3A-201ENST00000254624 ORAOV1Q8WV07 137 aa14.45□□□□□ -0.1
EFR3A-201ENST00000254624 A0A1B0GWB2 263 aa14.44□□□□□ -0.1
EFR3A-201ENST00000254624 IGLC7A0M8Q6 106 aa14.44□□□□□ -0.1
EFR3A-201ENST00000254624 PRB1P04280 392 aa14.44□□□□□ -0.1
EFR3A-201ENST00000254624 IGHV4-30-2A0A087WSY4 118 aa14.44□□□□□ -0.1
EFR3A-201ENST00000254624 TNFRSF6BO95407 300 aa14.44□□□□□ -0.1
EFR3A-201ENST00000254624 ZNF726P1Q15940 193 aa14.44□□□□□ -0.1
EFR3A-201ENST00000254624 PKDREJQ9NTG1 2253 aa14.44□□□□□ -0.1
EFR3A-201ENST00000254624 DAD1P61803 113 aa14.44□□□□□ -0.1
EFR3A-201ENST00000254624 SS18Q15532 418 aa14.44□□□□□ -0.1
EFR3A-201ENST00000254624 POLEQ07864 2286 aa14.44□□□□□ -0.1
EFR3A-201ENST00000254624 PCNX2A6NKB5 2137 aa14.43□□□□□ -0.1
EFR3A-201ENST00000254624 USF3Q68DE3 2245 aa14.43□□□□□ -0.1
EFR3A-201ENST00000254624 GGTLC3B5MD39 225 aa14.43□□□□□ -0.1
EFR3A-201ENST00000254624 C1orf159Q96HA4 380 aa14.43□□□□□ -0.1
EFR3A-201ENST00000254624 ATP6V0BQ99437 205 aa14.43□□□□□ -0.1
EFR3A-201ENST00000254624 IGHV3-64A0A075B6Q5 118 aa14.43□□□□□ -0.1
EFR3A-201ENST00000254624 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.43□□□□□ -0.1
EFR3A-201ENST00000254624 LGALS1P09382 135 aaKnown RBP14.42□□□□□ -0.1
EFR3A-201ENST00000254624 Q71RC1 249 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms