RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 KIR2DL5AQ8N109 375 aa16.84■□□□□ 0.29
APOE-201ENST00000252486 KIR2DL5BQ8NHK3 375 aa16.84■□□□□ 0.29
APOE-201ENST00000252486 RPUSD4Q96CM3 377 aaKnown RBP16.84■□□□□ 0.29
APOE-201ENST00000252486 CLUHP3Q96NS8 147 aa16.84■□□□□ 0.29
APOE-201ENST00000252486 H2AFB1P0C5Y9 115 aa16.83■□□□□ 0.28
APOE-201ENST00000252486 RANP62826 216 aaKnown RBP16.83■□□□□ 0.28
APOE-201ENST00000252486 IQCF2Q8IXL9 164 aa16.83■□□□□ 0.28
APOE-201ENST00000252486 Q9H3A6 140 aa16.83■□□□□ 0.28
APOE-201ENST00000252486 TEX46H3BTG2 121 aa16.82■□□□□ 0.28
APOE-201ENST00000252486 UBE2CO00762 179 aa16.82■□□□□ 0.28
APOE-201ENST00000252486 ICAM4Q14773 271 aa16.82■□□□□ 0.28
APOE-201ENST00000252486 MORN3Q6PF18 240 aaPredicted RBP16.82■□□□□ 0.28
APOE-201ENST00000252486 EXOC3-AS1Q8N2X6 119 aa16.82■□□□□ 0.28
APOE-201ENST00000252486 OR8A1Q8NGG7 326 aa16.82■□□□□ 0.28
APOE-201ENST00000252486 SFT2D1Q8WV19 159 aa16.82■□□□□ 0.28
APOE-201ENST00000252486 OTORQ9NRC9 128 aa16.82■□□□□ 0.28
APOE-201ENST00000252486 RPL35AP18077 110 aaKnown RBP16.81■□□□□ 0.28
APOE-201ENST00000252486 CSN1S1P47710 185 aa16.81■□□□□ 0.28
APOE-201ENST00000252486 NUTF2P61970 127 aaKnown RBP16.81■□□□□ 0.28
APOE-201ENST00000252486 ARL6IP6Q8N6S5 226 aa16.81■□□□□ 0.28
APOE-201ENST00000252486 OR10J6PQ8NGY7 276 aa16.81■□□□□ 0.28
APOE-201ENST00000252486 A8MTW9 85 aa16.8■□□□□ 0.28
APOE-201ENST00000252486 F6UB75 175 aa16.8■□□□□ 0.28
APOE-201ENST00000252486 FGF8P55075 233 aaPredicted RBP16.8■□□□□ 0.28
APOE-201ENST00000252486 HAGHQ16775 308 aa16.8■□□□□ 0.28
APOE-201ENST00000252486 GDF5OSQ5U4N7 250 aa16.8■□□□□ 0.28
APOE-201ENST00000252486 ALKAL2Q6UX46 152 aa16.8■□□□□ 0.28
APOE-201ENST00000252486 RXFP4Q8TDU9 374 aa16.8■□□□□ 0.28
APOE-201ENST00000252486 CSTL1Q9H114 145 aa16.8■□□□□ 0.28
APOE-201ENST00000252486 PGPA6NDG6 321 aa16.79■□□□□ 0.28
APOE-201ENST00000252486 ZNF705FA8MVS1 300 aaPredicted RBP16.79■□□□□ 0.28
APOE-201ENST00000252486 M0R3E3 92 aa16.79■□□□□ 0.28
APOE-201ENST00000252486 HBE1P02100 147 aa16.79■□□□□ 0.28
APOE-201ENST00000252486 DEFB1P60022 68 aa16.79■□□□□ 0.28
APOE-201ENST00000252486 OR4B1Q8NGF8 309 aa16.79■□□□□ 0.28
APOE-201ENST00000252486 CMTM2Q8TAZ6 248 aa16.79■□□□□ 0.28
APOE-201ENST00000252486 TRAV1-1A0A0B4J248 108 aa16.78■□□□□ 0.28
APOE-201ENST00000252486 A0A1W2PRE2 83 aa16.78■□□□□ 0.28
APOE-201ENST00000252486 PPT1P50897 306 aa16.78■□□□□ 0.28
APOE-201ENST00000252486 HIST1H1AQ02539 215 aaPredicted RBP16.78■□□□□ 0.28
APOE-201ENST00000252486 SBSPONQ8IVN8 264 aa16.78■□□□□ 0.28
APOE-201ENST00000252486 NKX6-2Q9C056 277 aaPredicted RBP16.78■□□□□ 0.28
APOE-201ENST00000252486 ARL2-SNX15V9GYD0 113 aa16.78■□□□□ 0.28
APOE-201ENST00000252486 ZNF705EA8MWA4 302 aaPredicted RBP16.77■□□□□ 0.28
APOE-201ENST00000252486 NHLRC4P0CG21 123 aaPredicted RBP16.77■□□□□ 0.28
APOE-201ENST00000252486 CNN1P51911 297 aaKnown RBP16.77■□□□□ 0.28
APOE-201ENST00000252486 TMPRSS5Q9H3S3 457 aa16.77■□□□□ 0.28
APOE-201ENST00000252486 BLOC1S1P78537 153 aa16.76■□□□□ 0.27
APOE-201ENST00000252486 C1QTNF4Q9BXJ3 329 aa16.76■□□□□ 0.27
APOE-201ENST00000252486 PRAC2D3DTV9 90 aa16.75■□□□□ 0.27
APOE-201ENST00000252486 IGKV3-20P01619 116 aa16.75■□□□□ 0.27
APOE-201ENST00000252486 Q6ZWC4 215 aa16.75■□□□□ 0.27
APOE-201ENST00000252486 C5orf17Q8NAS9 161 aa16.75■□□□□ 0.27
APOE-201ENST00000252486 ASCL2Q99929 193 aa16.75■□□□□ 0.27
APOE-201ENST00000252486 PPP1R14DQ9NXH3 145 aa16.75■□□□□ 0.27
APOE-201ENST00000252486 RBAKDNA6NC62 111 aa16.74■□□□□ 0.27
APOE-201ENST00000252486 NPIPB6E9PJ23 425 aa16.74■□□□□ 0.27
APOE-201ENST00000252486 CA1P00915 261 aaPredicted RBP16.74■□□□□ 0.27
APOE-201ENST00000252486 AMBPP02760 352 aa16.74■□□□□ 0.27
APOE-201ENST00000252486 ZNF705DP0CH99 300 aaPredicted RBP16.74■□□□□ 0.27
APOE-201ENST00000252486 ZNF705BP0CI00 300 aaPredicted RBP16.74■□□□□ 0.27
APOE-201ENST00000252486 LINC00477Q96M19 166 aa16.74■□□□□ 0.27
APOE-201ENST00000252486 ZMAT4Q9H898 229 aa16.74■□□□□ 0.27
APOE-201ENST00000252486 AGRNO00468 2067 aa16.73■□□□□ 0.27
APOE-201ENST00000252486 SERTM2A0A1B0GWG4 89 aa16.73■□□□□ 0.27
APOE-201ENST00000252486 FAM74A7A6NL05 159 aa16.73■□□□□ 0.27
APOE-201ENST00000252486 SLC25A5P05141 298 aaKnown RBP16.73■□□□□ 0.27
APOE-201ENST00000252486 SUMO1P63165 101 aaKnown RBP16.73■□□□□ 0.27
APOE-201ENST00000252486 SPATA25Q9BR10 227 aa16.73■□□□□ 0.27
APOE-201ENST00000252486 TM2D3Q9BRN9 247 aa16.73■□□□□ 0.27
APOE-201ENST00000252486 GGTLC3B5MD39 225 aa16.72■□□□□ 0.27
APOE-201ENST00000252486 DIRC3C9JPN6 131 aa16.72■□□□□ 0.27
APOE-201ENST00000252486 UBE2G2P60604 165 aa16.72■□□□□ 0.27
APOE-201ENST00000252486 TEX261Q6UWH6 196 aa16.72■□□□□ 0.27
APOE-201ENST00000252486 AMTNQ6UX39 209 aa16.72■□□□□ 0.27
APOE-201ENST00000252486 C9orf47Q6ZRZ4 202 aa16.72■□□□□ 0.27
APOE-201ENST00000252486 ODF3Q96PU9 254 aa16.72■□□□□ 0.27
APOE-201ENST00000252486 TP53TG1Q9Y2A0 90 aa16.72■□□□□ 0.27
APOE-201ENST00000252486 A0A1B0GV50 99 aa16.71■□□□□ 0.27
APOE-201ENST00000252486 IFNA7P01567 189 aa16.71■□□□□ 0.27
APOE-201ENST00000252486 TSPOP30536 169 aa16.71■□□□□ 0.27
APOE-201ENST00000252486 TMEM78Q5T7P6 136 aa16.71■□□□□ 0.27
APOE-201ENST00000252486 TCEAL7Q9BRU2 100 aa16.71■□□□□ 0.27
APOE-201ENST00000252486 MANBALQ9NQG1 85 aa16.71■□□□□ 0.27
APOE-201ENST00000252486 YTHDF2Q9Y5A9 579 aaKnown RBP16.71■□□□□ 0.27
APOE-201ENST00000252486 IGKV2-40A0A087WW87 121 aaPredicted RBP16.7■□□□□ 0.26
APOE-201ENST00000252486 K7EQM0 130 aa16.7■□□□□ 0.26
APOE-201ENST00000252486 IGKV2D-40P01614 121 aaPredicted RBP16.7■□□□□ 0.26
APOE-201ENST00000252486 EPDR1Q9UM22 224 aa16.7■□□□□ 0.26
APOE-201ENST00000252486 IFNA1P01562 189 aa16.69■□□□□ 0.26
APOE-201ENST00000252486 GIG44P09565 113 aaPredicted RBP16.69■□□□□ 0.26
APOE-201ENST00000252486 PMS2P11Q13670 270 aa16.69■□□□□ 0.26
APOE-201ENST00000252486 CST9LP1Q5W188 147 aa16.69■□□□□ 0.26
APOE-201ENST00000252486 ZNF680Q8NEM1 530 aa16.69■□□□□ 0.26
APOE-201ENST00000252486 RCHY1Q96PM5 261 aa16.69■□□□□ 0.26
APOE-201ENST00000252486 AGPAT4-IT1Q9H0P7 198 aa16.69■□□□□ 0.26
APOE-201ENST00000252486 SLC35B3Q9H1N7 401 aa16.69■□□□□ 0.26
APOE-201ENST00000252486 RPH3ALQ9UNE2 315 aa16.69■□□□□ 0.26
APOE-201ENST00000252486 F6UZH7 168 aa16.68■□□□□ 0.26
APOE-201ENST00000252486 PAGE4O60829 102 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms