RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 OR5G3P0C626 314 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 BTCP35070 178 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 CDKN1BP46527 198 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 FGL1Q08830 312 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 ZNF493Q6ZR52 646 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 C6orf223Q8N319 242 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 TMEM263Q8WUH6 116 aaKnown RBP7.18□□□□□ -1.26
VPS50-201ENST00000251739 RPUSD4Q96CM3 377 aaKnown RBP7.18□□□□□ -1.26
VPS50-201ENST00000251739 ATG101Q9BSB4 218 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 KRTAP1-5Q9BYS1 174 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 RBM38Q9H0Z9 239 aaKnown RBP7.18□□□□□ -1.26
VPS50-201ENST00000251739 ARV1Q9H2C2 271 aa7.18□□□□□ -1.26
VPS50-201ENST00000251739 ZNF331Q9NQX6 463 aaPredicted RBP7.18□□□□□ -1.26
VPS50-201ENST00000251739 hCG_2014768A0A024R1R8 64 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 TSC22D2O75157 780 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 METTL15P1P0C7V9 234 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 TAS2R30P59541 319 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 RRAS2P62070 204 aaPredicted RBP7.17□□□□□ -1.26
VPS50-201ENST00000251739 SLC38A11Q08AI6 406 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 ARL16Q0P5N6 197 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 PXDC1Q5TGL8 231 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 LCN15Q6UWW0 184 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 LINC00299Q6ZSB3 139 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 ZNF503Q96F45 646 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 LINC01587Q99440 93 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 C20orf144Q9BQM9 153 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 ARL6Q9H0F7 186 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 NPVFQ9HCQ7 196 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 FLVCR2Q9UPI3 526 aa7.17□□□□□ -1.26
VPS50-201ENST00000251739 TIMM8BQ9Y5J9 83 aaPredicted RBP7.17□□□□□ -1.26
VPS50-201ENST00000251739 LOC105371267A0A1B0GV96 52 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 NAP1L6A6NFF2 107 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 CCDC160A6NGH7 325 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 C16orf90A8MZG2 172 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 PRAC2D3DTV9 90 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 H7BYZ3 331 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 SLC17A3O00476 420 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 NUDT3O95989 172 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 OR4E1P0C645 316 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 IGLC2P0DOY2 106 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 PRB4P10163 310 aaPredicted RBP7.16□□□□□ -1.26
VPS50-201ENST00000251739 CCL18P55774 89 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 RHOBP62745 196 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 BAK1Q16611 211 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 LCE3BQ5TA77 95 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 GFI1BQ5VTD9 330 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 MORN5Q5VZ52 161 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 S100A7AQ86SG5 101 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 ZNF546Q86UE3 836 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 ENKURQ8TC29 256 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 SDHCQ99643 169 aaPredicted RBP7.16□□□□□ -1.26
VPS50-201ENST00000251739 SLC50A1Q9BRV3 221 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 RNF24Q9Y225 148 aa7.16□□□□□ -1.26
VPS50-201ENST00000251739 C7orf66A4D0T2 115 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 AGPAT2O15120 278 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 IAH1Q2TAA2 248 aaPredicted RBP7.15□□□□□ -1.26
VPS50-201ENST00000251739 SSX7Q7RTT5 188 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 LINC00305Q7Z4B0 112 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 OR10P1Q8NGE3 313 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 TMEM37Q8WXS4 190 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 SAT2Q96F10 170 aaPredicted RBP7.15□□□□□ -1.26
VPS50-201ENST00000251739 ODF3Q96PU9 254 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 MGST2Q99735 147 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 UPK3BQ9BT76 320 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 GGACTQ9BVM4 153 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 PARD6GQ9BYG4 376 aaPredicted RBP7.15□□□□□ -1.26
VPS50-201ENST00000251739 NOP10Q9NPE3 64 aaKnown RBP7.15□□□□□ -1.26
VPS50-201ENST00000251739 PPP1R14DQ9NXH3 145 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 MGAT4CQ9UBM8 478 aa7.15□□□□□ -1.26
VPS50-201ENST00000251739 TMA7Q9Y2S6 64 aaKnown RBP7.15□□□□□ -1.26
VPS50-201ENST00000251739 H3BNG1 76 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 H3BQ15 152 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 GOSR2O14653 212 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 MBPP02686 304 aaPredicted RBP7.14□□□□□ -1.27
VPS50-201ENST00000251739 ANXA7P20073 488 aaKnown RBP7.14□□□□□ -1.27
VPS50-201ENST00000251739 HOXA5P20719 270 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 SSTP61278 116 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 OPCMLQ14982 345 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 SPANXN2Q5MJ10 180 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 BPIFA4PQ86YQ2 179 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 CCDC28AQ8IWP9 274 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 OR10J6PQ8NGY7 276 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 LRRC20Q8TCA0 184 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 RXFP4Q8TDU9 374 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 MITD1Q8WV92 249 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 Q9H3A6 140 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 C11orf1Q9H5F2 150 aa7.14□□□□□ -1.27
VPS50-201ENST00000251739 TRAV26-1A0A087WT03 109 aa7.13□□□□□ -1.27
VPS50-201ENST00000251739 SNRPCP09234 159 aaKnown RBP7.13□□□□□ -1.27
VPS50-201ENST00000251739 HTN1P15515 57 aa7.13□□□□□ -1.27
VPS50-201ENST00000251739 TRIQKQ629K1 86 aa7.13□□□□□ -1.27
VPS50-201ENST00000251739 Q9H8V8 135 aa7.13□□□□□ -1.27
VPS50-201ENST00000251739 PXMP4Q9Y6I8 212 aa7.13□□□□□ -1.27
VPS50-201ENST00000251739 DMBT1Q9UGM3 2413 aaPredicted RBP7.12□□□□□ -1.27
VPS50-201ENST00000251739 A0A1W2PPQ1 181 aa7.12□□□□□ -1.27
VPS50-201ENST00000251739 H3BTX0 84 aa7.12□□□□□ -1.27
VPS50-201ENST00000251739 COX7A2P2O60397 106 aa7.12□□□□□ -1.27
VPS50-201ENST00000251739 SCGB1D2O95969 90 aa7.12□□□□□ -1.27
VPS50-201ENST00000251739 CT45A10P0DMU9 189 aa7.12□□□□□ -1.27
VPS50-201ENST00000251739 BTF3P20290 206 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms