RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 USMG5Q96IX5 58 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 ZNF492Q9P255 531 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 C6orf226Q5I0X4 101 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 Q6ZR03 302 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 NPSP0C0P6 89 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 C20orf144Q9BQM9 153 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 IGHV3-16A0A0C4DH30 117 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 E9PQ18 207 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 PRR30Q53SZ7 412 aaPredicted RBP10.75□□□□□ -0.69
NEK4-201ENST00000233027 TPSG1Q9NRR2 321 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 MYMXA0A1B0GTQ4 84 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 INSP01308 110 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 PRIMA1Q86XR5 153 aa10.75□□□□□ -0.69
NEK4-201ENST00000233027 THSD7BQ9C0I4 1608 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 PRSS46E5RG02 174 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 IGHV2-70P01814 119 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 C10orf91Q5T1B1 145 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 KIAA2026Q5HYC2 2103 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 B4DSR2 109 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 CFHR3Q02985 330 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 MRPL51Q4U2R6 128 aaKnown RBP10.74□□□□□ -0.69
NEK4-201ENST00000233027 PROK2Q9HC23 129 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 FAM104BQ5XKR9 115 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 YLPM1P49750 1951 aaKnown RBP10.74□□□□□ -0.69
NEK4-201ENST00000233027 TCF15Q12870 199 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 ZNF833PQ6ZTB9 187 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 SLC25A16P16260 332 aa10.74□□□□□ -0.69
NEK4-201ENST00000233027 DAZ1Q9NQZ3 744 aaKnown RBP10.74□□□□□ -0.69
NEK4-201ENST00000233027 SMIM27A0A1W2PRY6 76 aa10.73□□□□□ -0.69
NEK4-201ENST00000233027 PDE6HQ13956 83 aa10.73□□□□□ -0.69
NEK4-201ENST00000233027 NEGR1Q7Z3B1 354 aa10.73□□□□□ -0.69
NEK4-201ENST00000233027 TRBV19A0A075B6N1 114 aa10.73□□□□□ -0.69
NEK4-201ENST00000233027 DSCR9P59020 149 aa10.73□□□□□ -0.69
NEK4-201ENST00000233027 DEFB131AP59861 70 aa10.73□□□□□ -0.69
NEK4-201ENST00000233027 CEP290O15078 2479 aa10.73□□□□□ -0.69
NEK4-201ENST00000233027 G3V318 75 aa10.73□□□□□ -0.69
NEK4-201ENST00000233027 SPINK13Q1W4C9 94 aa10.73□□□□□ -0.69
NEK4-201ENST00000233027 LY6G5BQ8NDX9 201 aa10.73□□□□□ -0.69
NEK4-201ENST00000233027 LMO1P25800 156 aa10.73□□□□□ -0.69
NEK4-201ENST00000233027 TRPT1Q86TN4 253 aaKnown RBP10.72□□□□□ -0.69
NEK4-201ENST00000233027 INS-IGF2F8WCM5 200 aa10.72□□□□□ -0.69
NEK4-201ENST00000233027 IGHV2-5P01817 119 aa10.72□□□□□ -0.69
NEK4-201ENST00000233027 HELZP42694 1942 aaKnown RBP10.72□□□□□ -0.69
NEK4-201ENST00000233027 RLFQ13129 1914 aa10.72□□□□□ -0.69
NEK4-201ENST00000233027 FANCMQ8IYD8 2048 aa10.72□□□□□ -0.69
NEK4-201ENST00000233027 WIPF3A6NGB9 483 aa10.72□□□□□ -0.69
NEK4-201ENST00000233027 IGLC2P0DOY2 106 aa10.72□□□□□ -0.69
NEK4-201ENST00000233027 IGLC3P0DOY3 106 aa10.72□□□□□ -0.69
NEK4-201ENST00000233027 DIAPH2-AS1Q14236 149 aa10.72□□□□□ -0.69
NEK4-201ENST00000233027 Q8N8P6 123 aa10.72□□□□□ -0.69
NEK4-201ENST00000233027 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.71□□□□□ -0.69
NEK4-201ENST00000233027 DEFB130BP0DP73 79 aa10.71□□□□□ -0.69
NEK4-201ENST00000233027 DEFB130AP0DP74 79 aa10.71□□□□□ -0.69
NEK4-201ENST00000233027 IGLL1P15814 213 aa10.71□□□□□ -0.69
NEK4-201ENST00000233027 MAJINQ3KP22 176 aa10.71□□□□□ -0.69
NEK4-201ENST00000233027 C2orf66Q6UXQ4 117 aa10.71□□□□□ -0.69
NEK4-201ENST00000233027 SRSF8Q9BRL6 282 aaKnown RBP10.71□□□□□ -0.69
NEK4-201ENST00000233027 Q6ZS92 163 aa10.71□□□□□ -0.69
NEK4-201ENST00000233027 MAPK1IP1LQ8NDC0 245 aa10.71□□□□□ -0.69
NEK4-201ENST00000233027 TSC2P49815 1807 aa10.71□□□□□ -0.7
NEK4-201ENST00000233027 ZNF134P52741 427 aa10.71□□□□□ -0.7
NEK4-201ENST00000233027 PLXND1Q9Y4D7 1925 aa10.71□□□□□ -0.7
NEK4-201ENST00000233027 C9orf118A6NHY6 69 aa10.71□□□□□ -0.7
NEK4-201ENST00000233027 TEX36Q5VZQ5 186 aa10.71□□□□□ -0.7
NEK4-201ENST00000233027 TRAV12-2A0A075B6T6 113 aa10.7□□□□□ -0.7
NEK4-201ENST00000233027 APC2O95996 2303 aa10.7□□□□□ -0.7
NEK4-201ENST00000233027 FAM110DQ8TAY7 271 aaPredicted RBP10.7□□□□□ -0.7
NEK4-201ENST00000233027 TICRRQ7Z2Z1 1910 aa10.7□□□□□ -0.7
NEK4-201ENST00000233027 RSPO1Q2MKA7 263 aaPredicted RBP10.7□□□□□ -0.7
NEK4-201ENST00000233027 ZC2HC1AQ96GY0 325 aa10.7□□□□□ -0.7
NEK4-201ENST00000233027 IGHV3-38A0A0C4DH36 116 aa10.7□□□□□ -0.7
NEK4-201ENST00000233027 MMP23AO75900 390 aa10.7□□□□□ -0.7
NEK4-201ENST00000233027 XCL2Q9UBD3 114 aa10.7□□□□□ -0.7
NEK4-201ENST00000233027 CDPF1Q6NVV7 123 aa10.7□□□□□ -0.7
NEK4-201ENST00000233027 SIGLEC8Q9NYZ4 499 aa10.7□□□□□ -0.7
NEK4-201ENST00000233027 GAGE12JA6NER3 117 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 GAGE1Q13065 139 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 GAGE4Q13068 117 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 GAGE5Q13069 117 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 C8orf86Q6ZUL3 223 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 K7EN84 100 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 K7ERJ3 54 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 WT1-ASQ06250 92 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 VWC2Q2TAL6 325 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 C15orf65H3BRN8 121 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 CMC4P56277 68 aaPredicted RBP10.69□□□□□ -0.7
NEK4-201ENST00000233027 CT83Q5H943 113 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 TSSC4Q9Y5U2 329 aaPredicted RBP10.69□□□□□ -0.7
NEK4-201ENST00000233027 H3BRN7 92 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 YPEL3P61236 119 aaPredicted RBP10.69□□□□□ -0.7
NEK4-201ENST00000233027 PLXNA4Q9HCM2 1894 aa10.69□□□□□ -0.7
NEK4-201ENST00000233027 ANXA2RQ3ZCQ2 193 aa10.68□□□□□ -0.7
NEK4-201ENST00000233027 UBE2DNLQ8IWF7 75 aa10.68□□□□□ -0.7
NEK4-201ENST00000233027 H3BMM0 161 aa10.68□□□□□ -0.7
NEK4-201ENST00000233027 UBE2WQ96B02 151 aa10.68□□□□□ -0.7
NEK4-201ENST00000233027 NPYP01303 97 aa10.68□□□□□ -0.7
NEK4-201ENST00000233027 SS18Q15532 418 aa10.68□□□□□ -0.7
NEK4-201ENST00000233027 MGAMO43451 1857 aa10.68□□□□□ -0.7
NEK4-201ENST00000233027 LY6G6EA0A0G2JKS1 128 aa10.68□□□□□ -0.7
NEK4-201ENST00000233027 VWC2LB2RUY7 222 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms