RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 M0R296 226 aa11.36□□□□□ -0.59
SFXN3-201ENST00000224807 ATP5G2Q06055 141 aa11.36□□□□□ -0.59
SFXN3-201ENST00000224807 HSD52Q0P140 79 aa11.36□□□□□ -0.59
SFXN3-201ENST00000224807 MRPL51Q4U2R6 128 aaKnown RBP11.36□□□□□ -0.59
SFXN3-201ENST00000224807 UFC1Q9Y3C8 167 aa11.36□□□□□ -0.59
SFXN3-201ENST00000224807 HAX1O00165 279 aa11.35□□□□□ -0.59
SFXN3-201ENST00000224807 IGLV1-44P01699 117 aa11.35□□□□□ -0.59
SFXN3-201ENST00000224807 HBDP02042 147 aa11.35□□□□□ -0.59
SFXN3-201ENST00000224807 KLF12Q9Y4X4 402 aa11.35□□□□□ -0.59
SFXN3-201ENST00000224807 ZNF785A8K8V0 405 aa11.35□□□□□ -0.59
SFXN3-201ENST00000224807 DKK4Q9UBT3 224 aa11.35□□□□□ -0.59
SFXN3-201ENST00000224807 LINC00312Q9Y6C7 94 aa11.35□□□□□ -0.59
SFXN3-201ENST00000224807 ANKHD1Q8IWZ3 2542 aaKnown RBP11.35□□□□□ -0.59
SFXN3-201ENST00000224807 SPG11Q96JI7 2443 aa11.35□□□□□ -0.59
SFXN3-201ENST00000224807 DCHS2Q6V1P9 2916 aa11.35□□□□□ -0.59
SFXN3-201ENST00000224807 NDUFA3O95167 84 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 ZC2HC1BQ5TFG8 222 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 UFSP1Q6NVU6 142 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 ZNF833PQ6ZTB9 187 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 DYNLRB1Q9NP97 96 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 OTORQ9NRC9 128 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 TRAV26-2A0A0B4J265 109 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 NDUFS7O75251 213 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 FCN3O75636 299 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 IGLV2-11P01706 119 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 INSL3P51460 131 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 NGBQ9NPG2 151 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 SEM1Q6ZVN7 128 aa11.34□□□□□ -0.59
SFXN3-201ENST00000224807 SH2D1AO60880 128 aa11.33□□□□□ -0.6
SFXN3-201ENST00000224807 IGLV2-23P01705 113 aa11.33□□□□□ -0.6
SFXN3-201ENST00000224807 PRSS33Q8NF86 280 aa11.33□□□□□ -0.6
SFXN3-201ENST00000224807 SOX21Q9Y651 276 aaPredicted RBP11.33□□□□□ -0.6
SFXN3-201ENST00000224807 AKAP13Q12802 2813 aa11.33□□□□□ -0.6
SFXN3-201ENST00000224807 TRAV40A0A0B4J280 105 aa11.32□□□□□ -0.6
SFXN3-201ENST00000224807 LGALS7P47929 136 aa11.32□□□□□ -0.6
SFXN3-201ENST00000224807 BOD1L2Q8IYS8 172 aa11.32□□□□□ -0.6
SFXN3-201ENST00000224807 CHAC1Q9BUX1 264 aa11.32□□□□□ -0.6
SFXN3-201ENST00000224807 PLSCR4Q9NRQ2 329 aa11.32□□□□□ -0.6
SFXN3-201ENST00000224807 RAI1Q7Z5J4 1906 aaPredicted RBP11.32□□□□□ -0.6
SFXN3-201ENST00000224807 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
SFXN3-201ENST00000224807 LY6HO94772 140 aa11.32□□□□□ -0.6
SFXN3-201ENST00000224807 THAP8Q8NA92 274 aa11.32□□□□□ -0.6
SFXN3-201ENST00000224807 AAMDCQ9H7C9 122 aa11.32□□□□□ -0.6
SFXN3-201ENST00000224807 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
SFXN3-201ENST00000224807 SCNM1Q9BWG6 230 aa11.32□□□□□ -0.6
SFXN3-201ENST00000224807 CD40P25942 277 aa11.31□□□□□ -0.6
SFXN3-201ENST00000224807 ERCC8Q13216 396 aa11.31□□□□□ -0.6
SFXN3-201ENST00000224807 SCGB2A2Q13296 93 aa11.31□□□□□ -0.6
SFXN3-201ENST00000224807 FAM104BQ5XKR9 115 aa11.31□□□□□ -0.6
SFXN3-201ENST00000224807 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
SFXN3-201ENST00000224807 C1orf162Q8NEQ5 155 aaPredicted RBP11.31□□□□□ -0.6
SFXN3-201ENST00000224807 RPEQ96AT9 228 aa11.31□□□□□ -0.6
SFXN3-201ENST00000224807 CTSZQ9UBR2 303 aa11.31□□□□□ -0.6
SFXN3-201ENST00000224807 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.31□□□□□ -0.64e-7■■■□□ 19
SFXN3-201ENST00000224807 IGKV1-17P01599 117 aa11.31□□□□□ -0.6
SFXN3-201ENST00000224807 RBPJQ06330 500 aa11.31□□□□□ -0.6
SFXN3-201ENST00000224807 HIST1H4GQ99525 98 aa11.31□□□□□ -0.6
SFXN3-201ENST00000224807 TRGV9Q99603 122 aa11.31□□□□□ -0.6
SFXN3-201ENST00000224807 TRAV17A0A0B4J275 112 aa11.3□□□□□ -0.6
SFXN3-201ENST00000224807 CIDEAO60543 219 aa11.3□□□□□ -0.6
SFXN3-201ENST00000224807 EGR2P11161 476 aaPredicted RBP11.3□□□□□ -0.6
SFXN3-201ENST00000224807 APOBEC3AP31941 199 aaPredicted RBP11.3□□□□□ -0.6
SFXN3-201ENST00000224807 CT83Q5H943 113 aa11.3□□□□□ -0.6
SFXN3-201ENST00000224807 SIGMAR1Q99720 223 aa11.3□□□□□ -0.6
SFXN3-201ENST00000224807 TRBV19A0A075B6N1 114 aa11.3□□□□□ -0.6
SFXN3-201ENST00000224807 TMEM158Q8WZ71 300 aa11.3□□□□□ -0.6
SFXN3-201ENST00000224807 ABHD17AQ96GS6 310 aa11.3□□□□□ -0.6
SFXN3-201ENST00000224807 VGLL1Q99990 258 aa11.3□□□□□ -0.6
SFXN3-201ENST00000224807 GFRA4Q9GZZ7 299 aa11.3□□□□□ -0.6
SFXN3-201ENST00000224807 EFNA4P52798 201 aa11.29□□□□□ -0.6
SFXN3-201ENST00000224807 RNF125Q96EQ8 232 aa11.29□□□□□ -0.6
SFXN3-201ENST00000224807 COL25A1Q9BXS0 654 aaPredicted RBP11.29□□□□□ -0.6
SFXN3-201ENST00000224807 ONECUT1Q9UBC0 465 aa11.29□□□□□ -0.6
SFXN3-201ENST00000224807 SIGLEC9Q9Y336 463 aa11.29□□□□□ -0.6
SFXN3-201ENST00000224807 TMEM8BA6NDV4 472 aa11.29□□□□□ -0.6
SFXN3-201ENST00000224807 NCBP2LA6PVI3 153 aaKnown RBP11.29□□□□□ -0.6
SFXN3-201ENST00000224807 ZNF80P51504 273 aaPredicted RBP11.29□□□□□ -0.6
SFXN3-201ENST00000224807 ATP5IP56385 69 aaPredicted RBP11.29□□□□□ -0.6
SFXN3-201ENST00000224807 ZNF418Q8TF45 676 aaPredicted RBP11.29□□□□□ -0.6
SFXN3-201ENST00000224807 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
SFXN3-201ENST00000224807 A0A1B0GWB2 263 aa11.29□□□□□ -0.6
SFXN3-201ENST00000224807 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
SFXN3-201ENST00000224807 RNF182Q8N6D2 247 aa11.29□□□□□ -0.6
SFXN3-201ENST00000224807 ZNF479Q96JC4 524 aa11.29□□□□□ -0.6
SFXN3-201ENST00000224807 NCOR1P1Q9H4R4 102 aa11.29□□□□□ -0.6
SFXN3-201ENST00000224807 SORL1Q92673 2214 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 TM4SF5O14894 197 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 EMP1P54849 157 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 UBALD2Q8IYN6 164 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 TRBV25-1A0A075B6N4 114 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 GAGE12HA6NDE8 117 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 CD59P13987 128 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 C3orf36Q3SXR2 165 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 SIGLEC15Q6ZMC9 328 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 OR4X2Q8NGF9 303 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 HIF1ANQ9NWT6 349 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 CYSLTR1Q9Y271 337 aa11.28□□□□□ -0.6
SFXN3-201ENST00000224807 IGHG3P01860 377 aa11.27□□□□□ -0.6
SFXN3-201ENST00000224807 BSPH1Q075Z2 132 aa11.27□□□□□ -0.6
SFXN3-201ENST00000224807 OR9G4Q8NGQ1 327 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms