RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 HOXB4P17483 251 aaPredicted RBP14.76□□□□□ -0.05
CLIP2-201ENST00000223398 ADORA2A-AS1P86434 159 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 GAGE1Q13065 139 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 GAGE4Q13068 117 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 GAGE5Q13069 117 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 TMEM95Q3KNT9 176 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 GAGE13Q4V321 117 aa14.76□□□□□ -0.05
CLIP2-201ENST00000223398 TEX43Q6ZNM6 134 aa14.75□□□□□ -0.05
CLIP2-201ENST00000223398 NUP35Q8NFH5 326 aa14.75□□□□□ -0.05
CLIP2-201ENST00000223398 TECTAO75443 2155 aa14.75□□□□□ -0.05
CLIP2-201ENST00000223398 C15orf65H3BRN8 121 aa14.75□□□□□ -0.05
CLIP2-201ENST00000223398 Q86TA4 180 aa14.75□□□□□ -0.05
CLIP2-201ENST00000223398 GAGE12BA1L429 117 aa14.75□□□□□ -0.05
CLIP2-201ENST00000223398 GAGE7O76087 117 aa14.75□□□□□ -0.05
CLIP2-201ENST00000223398 GAGE12FP0CL80 117 aa14.75□□□□□ -0.05
CLIP2-201ENST00000223398 GAGE12GP0CL81 117 aa14.75□□□□□ -0.05
CLIP2-201ENST00000223398 GAGE12IP0CL82 117 aa14.75□□□□□ -0.05
CLIP2-201ENST00000223398 PLXNA2O75051 1894 aa14.74□□□□□ -0.05
CLIP2-201ENST00000223398 E9PQ18 207 aa14.74□□□□□ -0.05
CLIP2-201ENST00000223398 PAX9P55771 341 aa14.74□□□□□ -0.05
CLIP2-201ENST00000223398 DEFB136Q30KP8 78 aa14.74□□□□□ -0.05
CLIP2-201ENST00000223398 C1orf147Q96MC9 270 aaPredicted RBP14.74□□□□□ -0.05
CLIP2-201ENST00000223398 C8orf49Q96NF6 230 aa14.74□□□□□ -0.05
CLIP2-201ENST00000223398 CST9LQ9H4G1 147 aa14.74□□□□□ -0.05
CLIP2-201ENST00000223398 NHP2Q9NX24 153 aaKnown RBP14.74□□□□□ -0.05
CLIP2-201ENST00000223398 VCYO14598 125 aa14.74□□□□□ -0.05
CLIP2-201ENST00000223398 IGHV2-70P01814 119 aa14.74□□□□□ -0.05
CLIP2-201ENST00000223398 TRAV1-1A0A0B4J248 108 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 YPEL3P61236 119 aaPredicted RBP14.73□□□□□ -0.05
CLIP2-201ENST00000223398 DKK4Q9UBT3 224 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 WT1-ASQ06250 92 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 C6orf226Q5I0X4 101 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 AMN1Q8IY45 258 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 CXCL1P09341 107 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 IGF2-ASQ6U949 168 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 MS4A6AQ9H2W1 248 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 TSPAN13O95857 204 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 IGHV4-38-2P0DP08 117 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 JPT2Q9H910 190 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 VPREB3Q9UKI3 123 aa14.73□□□□□ -0.05
CLIP2-201ENST00000223398 PLNP26678 52 aa14.72□□□□□ -0.05
CLIP2-201ENST00000223398 C8orf86Q6ZUL3 223 aa14.72□□□□□ -0.05
CLIP2-201ENST00000223398 LINC00311Q8N616 119 aa14.72□□□□□ -0.05
CLIP2-201ENST00000223398 PAX4O43316 350 aa14.72□□□□□ -0.05
CLIP2-201ENST00000223398 PAX2Q02962 417 aa14.72□□□□□ -0.05
CLIP2-201ENST00000223398 A0A1B0GWB2 263 aa14.72□□□□□ -0.05
CLIP2-201ENST00000223398 DMRT1Q9Y5R6 373 aa14.72□□□□□ -0.05
CLIP2-201ENST00000223398 MALRD1Q5VYJ5 2156 aa14.72□□□□□ -0.05
CLIP2-201ENST00000223398 CHCHD1Q96BP2 118 aaKnown RBP14.71□□□□□ -0.05
CLIP2-201ENST00000223398 MCRIP2Q9BUT9 160 aaKnown RBP14.71□□□□□ -0.05
CLIP2-201ENST00000223398 CUL9Q8IWT3 2517 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 NDUFA4O00483 81 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 LIME1Q9H400 295 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 HIST1H2BKO60814 126 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 HIST1H2BJP06899 126 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 HIST1H2BOP23527 126 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 HIST1H2BBP33778 126 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 HIST1H2BDP58876 126 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 HIST1H2BCP62807 126 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 HIST2H2BEQ16778 126 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.71□□□□□ -0.05
CLIP2-201ENST00000223398 HIST1H2BHQ93079 126 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 HIST1H2BNQ99877 126 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 HIST1H2BMQ99879 126 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 A0A1B0GV72 72 aa14.71□□□□□ -0.05
CLIP2-201ENST00000223398 A0A096LPF7 62 aa14.7□□□□□ -0.06
CLIP2-201ENST00000223398 APOC4P55056 127 aa14.7□□□□□ -0.06
CLIP2-201ENST00000223398 MORN3Q6PF18 240 aaPredicted RBP14.7□□□□□ -0.06
CLIP2-201ENST00000223398 AZU1P20160 251 aa14.7□□□□□ -0.06
CLIP2-201ENST00000223398 NCOR1P1Q9H4R4 102 aa14.7□□□□□ -0.06
CLIP2-201ENST00000223398 KAAG1Q9UBP8 84 aa14.7□□□□□ -0.06
CLIP2-201ENST00000223398 PDE6HQ13956 83 aa14.7□□□□□ -0.06
CLIP2-201ENST00000223398 IGKV1-39P01597 117 aa14.7□□□□□ -0.06
CLIP2-201ENST00000223398 IGKV1D-39P04432 117 aa14.7□□□□□ -0.06
CLIP2-201ENST00000223398 NUP210Q8TEM1 1887 aaPredicted RBP14.7□□□□□ -0.06
CLIP2-201ENST00000223398 LINC00518Q8N0U6 118 aa14.69□□□□□ -0.06
CLIP2-201ENST00000223398 FNDC10F2Z333 226 aa14.69□□□□□ -0.06
CLIP2-201ENST00000223398 ELANEP08246 267 aa14.69□□□□□ -0.06
CLIP2-201ENST00000223398 TMEM158Q8WZ71 300 aa14.68□□□□□ -0.06
CLIP2-201ENST00000223398 SPOCK3Q9BQ16 436 aa14.68□□□□□ -0.06
CLIP2-201ENST00000223398 SS18Q15532 418 aa14.68□□□□□ -0.06
CLIP2-201ENST00000223398 H3BUT2 72 aa14.67□□□□□ -0.06
CLIP2-201ENST00000223398 WISP2O76076 250 aa14.67□□□□□ -0.06
CLIP2-201ENST00000223398 KLF2Q9Y5W3 355 aaPredicted RBP14.67□□□□□ -0.06
CLIP2-201ENST00000223398 TMEM213A2RRL7 107 aa14.67□□□□□ -0.06
CLIP2-201ENST00000223398 TSSC4Q9Y5U2 329 aaPredicted RBP14.67□□□□□ -0.06
CLIP2-201ENST00000223398 SPCS1Q9Y6A9 102 aa14.67□□□□□ -0.06
CLIP2-201ENST00000223398 TRBV19A0A075B6N1 114 aa14.67□□□□□ -0.06
CLIP2-201ENST00000223398 KIF26AQ9ULI4 1882 aaPredicted RBP14.67□□□□□ -0.06
CLIP2-201ENST00000223398 IGHV3-38A0A0C4DH36 116 aa14.66□□□□□ -0.06
CLIP2-201ENST00000223398 SLC25A2Q9BXI2 301 aa14.66□□□□□ -0.06
CLIP2-201ENST00000223398 AMBPP02760 352 aa14.66□□□□□ -0.06
CLIP2-201ENST00000223398 C11orf53Q8IXP5 236 aa14.66□□□□□ -0.06
CLIP2-201ENST00000223398 RASL10AQ92737 203 aa14.66□□□□□ -0.06
CLIP2-201ENST00000223398 GATD1Q8NB37 220 aa14.66□□□□□ -0.06
CLIP2-201ENST00000223398 TRAV9-2A0A087WT02 112 aa14.66□□□□□ -0.06
CLIP2-201ENST00000223398 TMEM190Q8WZ59 177 aa14.66□□□□□ -0.06
CLIP2-201ENST00000223398 SPXQ9BT56 116 aa14.66□□□□□ -0.06
CLIP2-201ENST00000223398 MRPL27Q9P0M9 148 aaKnown RBP14.66□□□□□ -0.06
CLIP2-201ENST00000223398 SHANK1Q9Y566 2161 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms