RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 MUC21A0A0G2JKD1 596 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 MUC21A0A140T8X8 626 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 TACC2O95359 2948 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 IGKV2D-40P01614 121 aaPredicted RBP10.38□□□□□ -0.75
SRP54-201ENST00000216774 BMI1P35226 326 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 RHOGP84095 191 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 SRSF2Q01130 221 aaKnown RBP10.38□□□□□ -0.75
SRP54-201ENST00000216774 EBI3Q14213 229 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 VAMP3Q15836 100 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 MUC21Q5SSG8 566 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 AMN1Q8IY45 258 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 RABAC1Q9UI14 185 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 ZFHX2Q9C0A1 2572 aaPredicted RBP10.38□□□□□ -0.75
SRP54-201ENST00000216774 TMSB15BA0A087X1C1 80 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 NCBP2LA6PVI3 153 aaKnown RBP10.38□□□□□ -0.75
SRP54-201ENST00000216774 LY6HO94772 140 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 NCR2O95944 276 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 PRB4P10163 310 aaPredicted RBP10.38□□□□□ -0.75
SRP54-201ENST00000216774 GPR183P32249 361 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 MRPL51Q4U2R6 128 aaKnown RBP10.38□□□□□ -0.75
SRP54-201ENST00000216774 OR4C5Q8NGB2 326 aa10.38□□□□□ -0.75
SRP54-201ENST00000216774 RIF1Q5UIP0 2472 aaKnown RBP10.38□□□□□ -0.75
SRP54-201ENST00000216774 DCHS1Q96JQ0 3298 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 CD5LO43866 347 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 CTSGP08311 255 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 FAM106CPP0CH98 169 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 LGALS9BQ3B8N2 356 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 FAM106AQ4KMX7 169 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 MINOS1Q5TGZ0 78 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 LGALS9CQ6DKI2 356 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 VMO1Q7Z5L0 202 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 OR1N2Q8NGR9 330 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 MINOS1-NBL1R4GNA1 71 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 OR2T8A6NH00 312 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 EGR2P11161 476 aaPredicted RBP10.37□□□□□ -0.75
SRP54-201ENST00000216774 PAX8Q06710 450 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 LOXL1Q08397 574 aaPredicted RBP10.37□□□□□ -0.75
SRP54-201ENST00000216774 C2orf91Q6ZV80 131 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 FER1L6-AS1Q8NA97 138 aa10.37□□□□□ -0.75
SRP54-201ENST00000216774 A0A087X0K7 114 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 LOC389332A0A1B0GUA5 103 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 HBDP02042 147 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 IGLC6P0CF74 106 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 OR8A1Q8NGG7 326 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 NPFFR1Q9GZQ6 430 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 SMAD5-AS1Q9Y6J3 95 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 A0A1W2PRD5 423 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 A0A1W2PRF3 423 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 A0A1W2PRM7 423 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 IGHG4P01861 327 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 C11orf71Q6IPW1 123 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 DYNAPQ8N1N2 210 aa10.36□□□□□ -0.75
SRP54-201ENST00000216774 RNASE8Q8TDE3 154 aaKnown RBP10.36□□□□□ -0.75
SRP54-201ENST00000216774 ANKHD1Q8IWZ3 2542 aaKnown RBP10.35□□□□□ -0.75
SRP54-201ENST00000216774 GVINP1Q7Z2Y8 2422 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 CCL21O00585 134 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 CKS2P33552 79 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 TWIST1Q15672 202 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 VGLL1Q99990 258 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 CNFNQ9BYD5 112 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 IGHV3-23P01764 117 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 FGF6P10767 208 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 TMEM11P17152 192 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 ZNF80P51504 273 aaPredicted RBP10.35□□□□□ -0.75
SRP54-201ENST00000216774 SEC11AP67812 179 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 Q8TAT8 98 aa10.35□□□□□ -0.75
SRP54-201ENST00000216774 IGHV7-81A0A0B4J1V7 117 aa10.34□□□□□ -0.75
SRP54-201ENST00000216774 PPBPP02775 128 aa10.34□□□□□ -0.75
SRP54-201ENST00000216774 RAB9AP51151 201 aa10.34□□□□□ -0.75
SRP54-201ENST00000216774 RBX1P62877 108 aa10.34□□□□□ -0.75
SRP54-201ENST00000216774 NHLH1Q02575 133 aa10.34□□□□□ -0.75
SRP54-201ENST00000216774 FOXC1Q12948 553 aa10.34□□□□□ -0.75
SRP54-201ENST00000216774 KLK9Q2XQG4 91 aa10.33□□□□□ -0.76
SRP54-201ENST00000216774 KLK9Q9UKQ9 250 aa10.33□□□□□ -0.76
SRP54-201ENST00000216774 LRBAP50851 2863 aa10.33□□□□□ -0.76
SRP54-201ENST00000216774 NPYP01303 97 aa10.33□□□□□ -0.76
SRP54-201ENST00000216774 ANKRD39Q53RE8 183 aa10.33□□□□□ -0.76
SRP54-201ENST00000216774 TMEM97Q5BJF2 176 aa10.33□□□□□ -0.76
SRP54-201ENST00000216774 ZNF575Q86XF7 245 aa10.33□□□□□ -0.76
SRP54-201ENST00000216774 MSRB2Q9Y3D2 182 aa10.33□□□□□ -0.76
SRP54-201ENST00000216774 TPRP12270 2363 aaKnown RBP10.33□□□□□ -0.76
SRP54-201ENST00000216774 DCHS2Q6V1P9 2916 aa10.33□□□□□ -0.76
SRP54-201ENST00000216774 RBAKDNA6NC62 111 aa10.32□□□□□ -0.76
SRP54-201ENST00000216774 LINC01546A6NGU7 62 aa10.32□□□□□ -0.76
SRP54-201ENST00000216774 FABP5P3A8MUU1 101 aa10.32□□□□□ -0.76
SRP54-201ENST00000216774 CACNG7P62955 275 aa10.32□□□□□ -0.76
SRP54-201ENST00000216774 BOD1L2Q8IYS8 172 aa10.32□□□□□ -0.76
SRP54-201ENST00000216774 Q8N9W7 124 aa10.32□□□□□ -0.76
SRP54-201ENST00000216774 FAM110DQ8TAY7 271 aaPredicted RBP10.32□□□□□ -0.76
SRP54-201ENST00000216774 ZNF502Q8TBZ5 544 aa10.32□□□□□ -0.76
SRP54-201ENST00000216774 IFI27L1Q96BM0 104 aa10.32□□□□□ -0.76
SRP54-201ENST00000216774 PSMG3-AS1Q96PY0 264 aa10.32□□□□□ -0.76
SRP54-201ENST00000216774 PEF1Q9UBV8 284 aaKnown RBP10.32□□□□□ -0.76
SRP54-201ENST00000216774 TLN1Q9Y490 2541 aaKnown RBP10.32□□□□□ -0.76
SRP54-201ENST00000216774 CBY3A6NI87 242 aa10.32□□□□□ -0.76
SRP54-201ENST00000216774 OR9G4Q8NGQ1 327 aa10.32□□□□□ -0.76
SRP54-201ENST00000216774 SIVA1O15304 175 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 ORM1P02763 201 aa10.31□□□□□ -0.76
SRP54-201ENST00000216774 CDKN1BP46527 198 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms