RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 NAP1L6A6NFF2 107 aa13.62□□□□□ -0.23
SYNGR1-201ENST00000216155 COX7A2P2O60397 106 aa13.62□□□□□ -0.23
SYNGR1-201ENST00000216155 RLN2P04090 185 aa13.62□□□□□ -0.23
SYNGR1-201ENST00000216155 BTCP35070 178 aa13.62□□□□□ -0.23
SYNGR1-201ENST00000216155 C4orf46Q504U0 113 aa13.62□□□□□ -0.23
SYNGR1-201ENST00000216155 CCDC28AQ8IWP9 274 aa13.62□□□□□ -0.23
SYNGR1-201ENST00000216155 GGACTQ9BVM4 153 aa13.62□□□□□ -0.23
SYNGR1-201ENST00000216155 LINC00854A0A1B0GVQ3 168 aa13.61□□□□□ -0.23
SYNGR1-201ENST00000216155 SNURFLB1AK76 121 aa13.61□□□□□ -0.23
SYNGR1-201ENST00000216155 H3BQ15 152 aa13.61□□□□□ -0.23
SYNGR1-201ENST00000216155 J3KRW8 73 aa13.61□□□□□ -0.23
SYNGR1-201ENST00000216155 ESRGQ1W209 222 aa13.61□□□□□ -0.23
SYNGR1-201ENST00000216155 SPANXN2Q5MJ10 180 aa13.61□□□□□ -0.23
SYNGR1-201ENST00000216155 Q8N1X5 172 aa13.61□□□□□ -0.23
SYNGR1-201ENST00000216155 SAT2Q96F10 170 aaPredicted RBP13.61□□□□□ -0.23
SYNGR1-201ENST00000216155 GSKIPQ9P0R6 139 aa13.61□□□□□ -0.23
SYNGR1-201ENST00000216155 PXMP4Q9Y6I8 212 aa13.61□□□□□ -0.23
SYNGR1-201ENST00000216155 C7orf66A4D0T2 115 aa13.6□□□□□ -0.23
SYNGR1-201ENST00000216155 H3BNG1 76 aa13.6□□□□□ -0.23
SYNGR1-201ENST00000216155 MBPP02686 304 aaPredicted RBP13.6□□□□□ -0.23
SYNGR1-201ENST00000216155 CT45A10P0DMU9 189 aa13.6□□□□□ -0.23
SYNGR1-201ENST00000216155 INPP1P49441 399 aa13.6□□□□□ -0.23
SYNGR1-201ENST00000216155 KRTAP10-2P60368 255 aa13.6□□□□□ -0.23
SYNGR1-201ENST00000216155 C10orf113Q5VZT2 155 aa13.6□□□□□ -0.23
SYNGR1-201ENST00000216155 TRIQKQ629K1 86 aa13.6□□□□□ -0.23
SYNGR1-201ENST00000216155 ODF3Q96PU9 254 aa13.6□□□□□ -0.23
SYNGR1-201ENST00000216155 TMPRSS5Q9H3S3 457 aa13.6□□□□□ -0.23
SYNGR1-201ENST00000216155 MRPS16Q9Y3D3 137 aaKnown RBP13.6□□□□□ -0.23
SYNGR1-201ENST00000216155 TRAV12-3A0A0B4J271 114 aa13.59□□□□□ -0.23
SYNGR1-201ENST00000216155 A0A1W2PPQ1 181 aa13.59□□□□□ -0.23
SYNGR1-201ENST00000216155 MITD1Q8WV92 249 aa13.59□□□□□ -0.23
SYNGR1-201ENST00000216155 NPIPB6E9PJ23 425 aa13.58□□□□□ -0.24
SYNGR1-201ENST00000216155 BTF3P20290 206 aaKnown RBP13.58□□□□□ -0.24
SYNGR1-201ENST00000216155 LEPP41159 167 aa13.58□□□□□ -0.24
SYNGR1-201ENST00000216155 DAZ2Q13117 558 aaKnown RBP13.58□□□□□ -0.24
SYNGR1-201ENST00000216155 Q6ZTI0 123 aa13.58□□□□□ -0.24
SYNGR1-201ENST00000216155 ZNF431Q8TF32 576 aaPredicted RBP13.58□□□□□ -0.24
SYNGR1-201ENST00000216155 SDHCQ99643 169 aaPredicted RBP13.58□□□□□ -0.24
SYNGR1-201ENST00000216155 PYGO2Q9BRQ0 406 aa13.58□□□□□ -0.24
SYNGR1-201ENST00000216155 TRAV5A0A0B4J249 113 aa13.57□□□□□ -0.24
SYNGR1-201ENST00000216155 SCRT2Q9NQ03 307 aa13.57□□□□□ -0.24
SYNGR1-201ENST00000216155 ZNF586Q9NXT0 402 aa13.57□□□□□ -0.24
SYNGR1-201ENST00000216155 CCSO14618 274 aa13.56□□□□□ -0.24
SYNGR1-201ENST00000216155 CAMLGP49069 296 aa13.56□□□□□ -0.24
SYNGR1-201ENST00000216155 MIC13Q5XKP0 118 aa13.56□□□□□ -0.24
SYNGR1-201ENST00000216155 NRARPQ7Z6K4 114 aa13.56□□□□□ -0.24
SYNGR1-201ENST00000216155 VSIG2Q96IQ7 327 aa13.56□□□□□ -0.24
SYNGR1-201ENST00000216155 HERC1Q15751 4861 aa13.56□□□□□ -0.24
SYNGR1-201ENST00000216155 FAT1Q14517 4588 aa13.56□□□□□ -0.24
SYNGR1-201ENST00000216155 A0A096LPF7 62 aa13.55□□□□□ -0.24
SYNGR1-201ENST00000216155 GUK1Q16774 197 aa13.55□□□□□ -0.24
SYNGR1-201ENST00000216155 Q6ZRG5 221 aa13.55□□□□□ -0.24
SYNGR1-201ENST00000216155 C11orf72Q8NBR9 251 aa13.55□□□□□ -0.24
SYNGR1-201ENST00000216155 DNAJC4Q9NNZ3 241 aa13.55□□□□□ -0.24
SYNGR1-201ENST00000216155 L7N2F9 121 aa13.54□□□□□ -0.24
SYNGR1-201ENST00000216155 LINC00315P59091 139 aa13.54□□□□□ -0.24
SYNGR1-201ENST00000216155 VAMP2P63027 116 aa13.54□□□□□ -0.24
SYNGR1-201ENST00000216155 OR1L4Q8NGR5 311 aa13.54□□□□□ -0.24
SYNGR1-201ENST00000216155 C18orf15Q96N68 181 aa13.54□□□□□ -0.24
SYNGR1-201ENST00000216155 GSN-AS1Q9NRJ2 163 aa13.54□□□□□ -0.24
SYNGR1-201ENST00000216155 WDR83OSQ9Y284 106 aa13.54□□□□□ -0.24
SYNGR1-201ENST00000216155 LSM5Q9Y4Y9 91 aaKnown RBP13.54□□□□□ -0.24
SYNGR1-201ENST00000216155 CENPXA8MT69 81 aa13.53□□□□□ -0.24
SYNGR1-201ENST00000216155 M0R3E3 92 aa13.53□□□□□ -0.24
SYNGR1-201ENST00000216155 ZNF253O75346 499 aa13.53□□□□□ -0.24
SYNGR1-201ENST00000216155 CST7O76096 145 aa13.53□□□□□ -0.24
SYNGR1-201ENST00000216155 CAV2P51636 162 aa13.53□□□□□ -0.24
SYNGR1-201ENST00000216155 RAB31Q13636 194 aa13.53□□□□□ -0.24
SYNGR1-201ENST00000216155 Q6ZRN7 208 aaPredicted RBP13.53□□□□□ -0.24
SYNGR1-201ENST00000216155 ZNF680Q8NEM1 530 aa13.53□□□□□ -0.24
SYNGR1-201ENST00000216155 MRPL53Q96EL3 112 aaKnown RBP13.53□□□□□ -0.24
SYNGR1-201ENST00000216155 C20orf85Q9H1P6 137 aa13.53□□□□□ -0.24
SYNGR1-201ENST00000216155 C11orf1Q9H5F2 150 aa13.53□□□□□ -0.24
SYNGR1-201ENST00000216155 TRGV2A0A075B6R0 118 aa13.52□□□□□ -0.25
SYNGR1-201ENST00000216155 C7orf71A4D174 169 aa13.52□□□□□ -0.25
SYNGR1-201ENST00000216155 KLLNB2CW77 178 aa13.52□□□□□ -0.25
SYNGR1-201ENST00000216155 SLC25A5P05141 298 aaKnown RBP13.52□□□□□ -0.25
SYNGR1-201ENST00000216155 BCAP31P51572 246 aa13.52□□□□□ -0.25
SYNGR1-201ENST00000216155 ERCC8Q13216 396 aa13.52□□□□□ -0.25
SYNGR1-201ENST00000216155 PFDN5Q99471 154 aa13.52□□□□□ -0.25
SYNGR1-201ENST00000216155 UQCC1Q9NVA1 299 aa13.52□□□□□ -0.25
SYNGR1-201ENST00000216155 TRBV19A0A075B6N1 114 aa13.51□□□□□ -0.25
SYNGR1-201ENST00000216155 TRGV1A0A0A0MS02 117 aa13.51□□□□□ -0.25
SYNGR1-201ENST00000216155 UBE2L5PA0A1B0GUS4 154 aa13.51□□□□□ -0.25
SYNGR1-201ENST00000216155 FAM24AA6NFZ4 105 aa13.51□□□□□ -0.25
SYNGR1-201ENST00000216155 IL7P13232 177 aa13.51□□□□□ -0.25
SYNGR1-201ENST00000216155 BTN1A1Q13410 526 aa13.51□□□□□ -0.25
SYNGR1-201ENST00000216155 ZNF846Q147U1 533 aa13.51□□□□□ -0.25
SYNGR1-201ENST00000216155 VWC2Q2TAL6 325 aa13.51□□□□□ -0.25
SYNGR1-201ENST00000216155 FAM19A4Q96LR4 140 aa13.51□□□□□ -0.25
SYNGR1-201ENST00000216155 SLC39A9Q9NUM3 307 aa13.51□□□□□ -0.25
SYNGR1-201ENST00000216155 ZNF324O75467 553 aaPredicted RBP13.5□□□□□ -0.25
SYNGR1-201ENST00000216155 NDUFB4O95168 129 aa13.5□□□□□ -0.25
SYNGR1-201ENST00000216155 RPL29P47914 159 aaKnown RBP13.5□□□□□ -0.25
SYNGR1-201ENST00000216155 CD300CQ08708 224 aa13.5□□□□□ -0.25
SYNGR1-201ENST00000216155 LINC00467Q9BRT7 94 aa13.5□□□□□ -0.25
SYNGR1-201ENST00000216155 FUT9Q9Y231 359 aa13.5□□□□□ -0.25
SYNGR1-201ENST00000216155 FAM25EA8MYX2 175 aa13.49□□□□□ -0.25
SYNGR1-201ENST00000216155 CNPY1Q3B7I2 92 aa13.49□□□□□ -0.25
SYNGR1-201ENST00000216155 ANXA2RQ3ZCQ2 193 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms