RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Dnase2P56542 353 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Nr2c2apQ3TV70 140 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Usf1Q61069 310 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Fam174bQ8K064 153 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Olfr715Q8VG49 315 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Mettl23A2AA28 253 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Ccl17F6R5P4 103 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Ube2l3P68037 154 aaKnown RBP10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Rasl10bQ5SSG5 203 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Olfr1009Q8VFK1 314 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Olfr1454Q8VFW2 307 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Dctn5Q9QZB9 182 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Adam11Q9R1V4 773 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Rai1Q61818 1889 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Pglyrp3A1A547 347 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Gm4791J3QQ14 102 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Vmn1r78K7N608 313 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Cd8bP10300 213 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Tnfsf15Q5UBV8 252 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Znf474Q6V5K9 347 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Mrpl51Q9CPY1 128 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Ssbp3Q9D032 388 aa10.83□□□□□ -0.68
Clcn3-201ENSMUST00000004430 MyofQ69ZN7 2048 aaKnown RBP10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 CortP56469 109 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Tex30Q3TUU5 225 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 PnkdQ69ZP3 385 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Q6DIA7 600 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Vmn1r237Q8R296 289 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Mib2Q8R516 973 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Gp2Q9D733 531 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Ccl28Q9JIL2 130 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Timp1P12032 205 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Evi2aP20934 223 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 1700009N14RikQ14AA6 216 aaKnown RBP10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Slc17a2Q5SZA1 478 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Vstm2aQ8R0A6 236 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 OdamA1E960 273 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 ErhP84089 104 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Harbi1Q8BR93 349 aa10.82□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Trav6n-7A0A075B6A6 116 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 P01796 113 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 P01797 113 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 P01799 113 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Hoxa3P02831 443 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Neil2Q6R2P8 329 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Olfr917Q7TRC3 309 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Ifna12Q80SS5 189 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Chchd1Q9CQA6 118 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 TslpQ9JIE6 140 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Usf3B2RUQ2 2221 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Defa6P50704 93 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Slc25a5P51881 298 aaKnown RBP10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Tmem184aQ3UFJ6 425 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Slc24a5Q8C261 501 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 D1Ertd622eQ8VEB3 207 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Mrpl27Q99N92 148 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Lurap1Q9D6I9 239 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Aifm1Q9Z0X1 612 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Gm14214V9GX35 225 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Igh-3P01867 404 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Evx1P23683 416 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Tnfrsf26P83626 204 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Olfr94Q6UAH0 386 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Olfr1413Q8VGU3 323 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Pth2Q91W27 100 aa10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Rnf138Q9CQE0 245 aaKnown RBP10.81□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Trav13n-4A0A0G2JG01 110 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Mpig6bD7PDD4 242 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 P01638 115 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Rab24P35290 203 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Gcm1P70348 436 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 SelplgQ62170 397 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Olfr399Q7TRX3 311 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Olfr1370Q8VFG4 316 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Cacng8Q8VHW2 423 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Efemp2Q9WVJ9 443 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Wisp3D3Z5L9 354 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Prss32E9Q409 334 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Mtnd6P03925 172 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Defa13P50711 93 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Q3UZV7 1028 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Znf664Q4VA44 261 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Coro2aQ8C0P5 524 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Olfr303Q8VFP0 319 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 FibinQ9CQS3 217 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Tmem139E9PX92 214 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Rpl31P62900 125 aaKnown RBP10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Pmis2Q497Q9 96 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Olfr1404Q8VGE1 313 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Pcnx3Q8VI59 2028 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Kcnmb2Q9CZM9 235 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Herpud1Q9JJK5 391 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Igkv4-63A0A0G2JFU6 117 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Gm10130F6ZHM5 101 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Cnih1O35372 144 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Nkx2-8O70584 235 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Gabrg3P27681 467 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Sfrp2P97299 295 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 C1ql4Q4ZJM9 238 aa10.8□□□□□ -0.68
Clcn3-201ENSMUST00000004430 Lax1Q8BHB3 407 aa10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms