RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Trav12-1A0N8R1 115 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Igf2P09535 180 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 TgfaP48030 159 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Atp5iQ06185 71 aaKnown RBP7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Clpsl2Q3UW21 102 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Olfr1178Q7TR20 323 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Depp1Q8K2F3 205 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Itgbl1Q8VDV0 494 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Olfr1183Q8VFF8 303 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 LbhQ9CX60 105 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Rnd2Q9QYM5 227 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Kiaa0100Q5SYL3 2234 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Lrp5Q91VN0 1614 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Tmem29A2ANF5 204 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Prss32E9Q409 334 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Gm17430F6RSK3 157 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Mex3aG3UYU0 520 aaKnown RBP7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Gpm6bP35803 328 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Prss30Q9QYZ9 310 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Unc119Q9Z2R6 240 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Igkv1-133A0A0B4J1H8 120 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Gm45717A0A1B0GT68 152 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 6330409D20RikA2AK85 162 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 BC030500E9Q6W0 185 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Phxr1P15973 60 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Nkain3Q3URJ8 181 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Defb46Q4QY34 57 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Ceacam10Q61400 265 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Mob3bQ8VE04 216 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 ChtopQ9CY57 249 aaKnown RBP7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Hdgfl3Q9JMG7 202 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Trbv15A0A0A6YYE3 115 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Slc17a3G3UWD9 498 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 P01746 140 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 MyogP12979 224 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Myf5P24699 255 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Nutf2P61971 127 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Snrpd3P62320 126 aaKnown RBP7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 V1rd19Q3KNP5 305 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Olfr1380Q7TQT5 311 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Plppr2Q8VCY8 343 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Atxn7l1Q9CZ05 146 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Tmem126aQ9D8Y1 196 aa7.88□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Nup98Q6PFD9 1816 aaKnown RBP7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Trav6n-5A0A075B621 112 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Trav6-5A0A075B6B5 112 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Gm35315A0A1B0GRI2 571 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Igfbp3P47878 292 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Fgf11P70378 225 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Ptpn18Q61152 453 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Ubald1Q6P3B2 176 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Olfr761Q7TRJ0 323 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Rspo2Q8BFU0 243 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 GalmQ8K157 342 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Olfr530Q8VFE8 307 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Osr1Q9WVG7 266 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Ttc3O88196 1979 aaKnown RBP7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Igkv10-95A0A0G2JFY3 115 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Rnase9P60154 184 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Sfrp2P97299 295 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Q0VG49 157 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Cd52Q64389 74 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Hapln4Q80WM4 400 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Pcgf1Q8R023 259 aaKnown RBP7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Prss29Q99MS4 279 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Tac4Q99N14 128 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Foxj2Q9ES18 565 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Atoh7Q9Z2E5 149 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Gm38303A0A0A6YWW8 100 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 9830107B12RikD3Z5D6 160 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Lbhd2G3UW55 114 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 MiaQ61865 130 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Ifitm10Q8BR26 201 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 PgpQ8CHP8 321 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Bpifa5Q9CQX3 270 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 SdhdQ9CXV1 159 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Ighv14-4A0A0A6YVR1 117 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Gm9920D3YVZ2 140 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Ripply2Q2WG76 128 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Elovl5Q8BHI7 299 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Immp2lQ8BPT6 175 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 March11Q8CBH7 400 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 BivmQ8CBX9 502 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Olfr593Q8VF28 327 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Fam89bQ9QUI1 189 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Eif3gQ9Z1D1 320 aaKnown RBP7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Zfp142G5E869 1843 aa7.87□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Wnk3Q80XP9 1757 aa7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Cxcl2P10889 100 aa7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Bsph2Q0Q236 131 aa7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Arl14eplQ3UKZ7 152 aa7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Apobec4Q497M3 374 aa7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Gm21394Q497R7 227 aa7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 RalyQ64012 312 aaKnown RBP7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 F12Q80YC5 597 aa7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Fam206aQ80ZQ9 193 aaKnown RBP7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Defb21Q8C5Z4 100 aa7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Muc15Q8C6Z1 331 aa7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Olfr470Q8VF65 314 aa7.86□□□□□ -1.15
Ccdc47-201ENSMUST00000002043 Ormdl3Q9CPZ6 153 aa7.86□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms