RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PIMREGQ9BSJ6 248 aa13.21□□□□□ -0.3
PHGDH-229ENST00000641891 TRBV6-1A0A0K0K1D8 114 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 PAX1P15863 534 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 C5orf56Q8N8D9 126 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 ZNF502Q8TBZ5 544 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 C18orf32Q8TCD1 76 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 C14orf144Q96I85 54 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 POLR3KQ9Y2Y1 108 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-229ENST00000641891 GPX1P07203 203 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 PMCHP20382 165 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 ATP5L2Q7Z4Y8 100 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 VN1R17PQ8TDU5 208 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 C10orf105Q8TEF2 133 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 RABAC1Q9UI14 185 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 SOX21Q9Y651 276 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-229ENST00000641891 SMAD5-AS1Q9Y6J3 95 aa13.2□□□□□ -0.3
PHGDH-229ENST00000641891 CELSR1Q9NYQ6 3014 aa13.19□□□□□ -0.3
PHGDH-229ENST00000641891 TRAV40A0A0B4J280 105 aa13.19□□□□□ -0.3
PHGDH-229ENST00000641891 ZNF705FA8MVS1 300 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-229ENST00000641891 ZNF705DP0CH99 300 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-229ENST00000641891 ZNF705BP0CI00 300 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-229ENST00000641891 HBBP68871 147 aa13.19□□□□□ -0.3
PHGDH-229ENST00000641891 IGFL4Q6B9Z1 124 aa13.19□□□□□ -0.3
PHGDH-229ENST00000641891 S100A7AQ86SG5 101 aa13.19□□□□□ -0.3
PHGDH-229ENST00000641891 SIGLECL1Q8N7X8 197 aa13.19□□□□□ -0.3
PHGDH-229ENST00000641891 C8orf49Q96NF6 230 aa13.19□□□□□ -0.3
PHGDH-229ENST00000641891 TXN2Q99757 166 aa13.19□□□□□ -0.3
PHGDH-229ENST00000641891 PDE6HQ13956 83 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 C16orf54Q6UWD8 224 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 AAMDCQ9H7C9 122 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 IGHV4-30-2A0A087WSY4 118 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 IGHV1-69DA0A0B4J2H0 117 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 A8MWP6 167 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 K7EQM0 130 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 IGHV1-69P01742 117 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 CLEC3BP05452 202 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 AMTP48728 403 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 CRIP1P50238 77 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 TOMM20LQ6UXN7 152 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 RBPMS2Q6ZRY4 209 aaKnown RBP13.18□□□□□ -0.3
PHGDH-229ENST00000641891 FAM19A2Q8N3H0 131 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 CCDC140Q96MF4 163 aa13.18□□□□□ -0.3
PHGDH-229ENST00000641891 IGKV2-40A0A087WW87 121 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-229ENST00000641891 IGKV2D-40P01614 121 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-229ENST00000641891 RPL7P18124 248 aaKnown RBP13.17□□□□□ -0.3
PHGDH-229ENST00000641891 HLA-DMBP28068 263 aa13.17□□□□□ -0.3
PHGDH-229ENST00000641891 ATP5J2P56134 94 aa13.17□□□□□ -0.3
PHGDH-229ENST00000641891 PIFOQ8TCI5 191 aa13.17□□□□□ -0.3
PHGDH-229ENST00000641891 ALKBH7Q9BT30 221 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-229ENST00000641891 GFRA4Q9GZZ7 299 aa13.17□□□□□ -0.3
PHGDH-229ENST00000641891 LINC00527Q9UJ94 153 aa13.17□□□□□ -0.3
PHGDH-229ENST00000641891 ZFP30Q9Y2G7 519 aa13.17□□□□□ -0.3
PHGDH-229ENST00000641891 TMEM8BA6NDV4 472 aa13.17□□□□□ -0.3
PHGDH-229ENST00000641891 SCGB2A1O75556 95 aa13.17□□□□□ -0.3
PHGDH-229ENST00000641891 CLEC19AQ6UXS0 136 aa13.17□□□□□ -0.3
PHGDH-229ENST00000641891 ZFAND3Q9H8U3 227 aa13.17□□□□□ -0.3
PHGDH-229ENST00000641891 ZNF324O75467 553 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-229ENST00000641891 IGHV4-38-2P0DP08 117 aa13.16□□□□□ -0.3
PHGDH-229ENST00000641891 TDRG1Q3Y452 100 aa13.16□□□□□ -0.3
PHGDH-229ENST00000641891 OR4B1Q8NGF8 309 aa13.16□□□□□ -0.3
PHGDH-229ENST00000641891 NRN1Q9NPD7 142 aa13.16□□□□□ -0.3
PHGDH-229ENST00000641891 IGSF10Q6WRI0 2623 aa13.16□□□□□ -0.3
PHGDH-229ENST00000641891 KRTDAPP60985 99 aa13.15□□□□□ -0.3
PHGDH-229ENST00000641891 KLK9Q2XQG4 91 aa13.15□□□□□ -0.3
PHGDH-229ENST00000641891 CLEC2AQ6UVW9 174 aa13.15□□□□□ -0.3
PHGDH-229ENST00000641891 REC114Q7Z4M0 266 aa13.15□□□□□ -0.3
PHGDH-229ENST00000641891 NRGNQ92686 78 aa13.15□□□□□ -0.3
PHGDH-229ENST00000641891 KLK9Q9UKQ9 250 aa13.15□□□□□ -0.3
PHGDH-229ENST00000641891 SPTAN1Q13813 2472 aaKnown RBP13.15□□□□□ -0.3
PHGDH-229ENST00000641891 IGHV3-66A0A0C4DH42 116 aa13.15□□□□□ -0.3
PHGDH-229ENST00000641891 PSG9Q00887 426 aa13.15□□□□□ -0.3
PHGDH-229ENST00000641891 MOB4Q9Y3A3 225 aa13.15□□□□□ -0.3
PHGDH-229ENST00000641891 APOHP02749 345 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-229ENST00000641891 NTF3P20783 257 aa13.14□□□□□ -0.31
PHGDH-229ENST00000641891 CSN1S1P47710 185 aa13.14□□□□□ -0.31
PHGDH-229ENST00000641891 FOXA3P55318 350 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-229ENST00000641891 KLF5Q13887 457 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-229ENST00000641891 TMEM190Q8WZ59 177 aa13.14□□□□□ -0.31
PHGDH-229ENST00000641891 CHEK1O14757 476 aa13.14□□□□□ -0.31
PHGDH-229ENST00000641891 IGHG4P01861 327 aa13.14□□□□□ -0.31
PHGDH-229ENST00000641891 NIT1Q86X76 327 aa13.14□□□□□ -0.31
PHGDH-229ENST00000641891 CACNA1BQ00975 2339 aa13.14□□□□□ -0.31
PHGDH-229ENST00000641891 IGHV3OR16-13A0A075B7E8 117 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 IGHV3-74A0A0B4J1X5 117 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 FAM231BA6NCW3 169 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 PRB1P04280 392 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 Q8N976 141 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 Q8TAT8 98 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 CLPSL1A2RUU4 121 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 M0QZ24 198 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 ZNF207O43670 478 aaKnown RBP13.13□□□□□ -0.31
PHGDH-229ENST00000641891 ARMS2P0C7Q2 107 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 LY6EQ16553 131 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 C1orf194Q5T5A4 169 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 RNASEKQ6P5S7 137 aaKnown RBP13.13□□□□□ -0.31
PHGDH-229ENST00000641891 EEF1AKMT3Q96AZ1 226 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 VGLL1Q99990 258 aa13.13□□□□□ -0.31
PHGDH-229ENST00000641891 IGHV3-49A0A0A0MS15 119 aa13.12□□□□□ -0.31
PHGDH-229ENST00000641891 TEX43Q6ZNM6 134 aa13.12□□□□□ -0.31
PHGDH-229ENST00000641891 TRAV41A0A0B4J266 112 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms