RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	IGLL1	P15814	213 aa		13.21	□□□□□ -0.3
PHGDH-223	ENST00000641597	ZFP36	P26651	326 aa	Known RBP	13.21	□□□□□ -0.3
PHGDH-223	ENST00000641597	ZNF124	Q15973	351 aa		13.21	□□□□□ -0.3
PHGDH-223	ENST00000641597	BPIFA4P	Q86YQ2	179 aa		13.21	□□□□□ -0.3
PHGDH-223	ENST00000641597	PMCHL2	Q9BQD1	86 aa		13.21	□□□□□ -0.3
PHGDH-223	ENST00000641597	TMEM14C	Q9P0S9	112 aa		13.21	□□□□□ -0.3
PHGDH-223	ENST00000641597	CHEK1	O14757	476 aa		13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	GNG7	O60262	68 aa		13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	LOC105371242	A0A075B767	164 aa		13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	OR2T8	A6NH00	312 aa		13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	NPIPB6	E9PJ23	425 aa		13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	MRPS12	O15235	138 aa	Known RBP	13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	BTF3	P20290	206 aa	Known RBP	13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	PAX2	Q02962	417 aa		13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	C5orf64	Q2M2E5	130 aa		13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	OR11H6	Q8NGC7	330 aa		13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	ZNF414	Q96IQ9	312 aa		13.2	□□□□□ -0.3
PHGDH-223	ENST00000641597	HLA-DMB	P28068	263 aa		13.19	□□□□□ -0.3
PHGDH-223	ENST00000641597	OR4F17	Q8NGA8	305 aa		13.19	□□□□□ -0.3
PHGDH-223	ENST00000641597	PSG8	Q9UQ74	426 aa		13.19	□□□□□ -0.3
PHGDH-223	ENST00000641597	NDUFB8	O95169	186 aa		13.19	□□□□□ -0.3
PHGDH-223	ENST00000641597	HOXB4	P17483	251 aa	Predicted RBP	13.19	□□□□□ -0.3
PHGDH-223	ENST00000641597	UQCR10	Q9UDW1	63 aa		13.19	□□□□□ -0.3
PHGDH-223	ENST00000641597	SPG11	Q96JI7	2443 aa		13.18	□□□□□ -0.3
PHGDH-223	ENST00000641597	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.18	□□□□□ -0.3
PHGDH-223	ENST00000641597	hDV102S1	A0JD36	115 aa		13.18	□□□□□ -0.3
PHGDH-223	ENST00000641597	IGKV2D-40	P01614	121 aa	Predicted RBP	13.18	□□□□□ -0.3
PHGDH-223	ENST00000641597	HINT1	P49773	126 aa	Predicted RBP	13.18	□□□□□ -0.3
PHGDH-223	ENST00000641597	HNRNPA3	P51991	378 aa	Known RBP	13.18	□□□□□ -0.3
PHGDH-223	ENST00000641597	VMO1	Q7Z5L0	202 aa		13.18	□□□□□ -0.3
PHGDH-223	ENST00000641597	SMIM12	Q96EX1	92 aa		13.18	□□□□□ -0.3
PHGDH-223	ENST00000641597	RAB1B	Q9H0U4	201 aa		13.18	□□□□□ -0.3
PHGDH-223	ENST00000641597		Q8TAT8	98 aa		13.18	□□□□□ -0.3
PHGDH-223	ENST00000641597	C1RL	Q9NZP8	487 aa		13.18	□□□□□ -0.3
PHGDH-223	ENST00000641597	ODF3B	A8MYP8	253 aa		13.17	□□□□□ -0.3
PHGDH-223	ENST00000641597	FAM106CP	P0CH98	169 aa		13.17	□□□□□ -0.3
PHGDH-223	ENST00000641597	FAM106A	Q4KMX7	169 aa		13.17	□□□□□ -0.3
PHGDH-223	ENST00000641597	CT83	Q5H943	113 aa		13.17	□□□□□ -0.3
PHGDH-223	ENST00000641597	CRYBG3	Q68DQ2	2970 aa		13.17	□□□□□ -0.3
PHGDH-223	ENST00000641597	IGLV11-55	A0A075B6I3	123 aa		13.17	□□□□□ -0.3
PHGDH-223	ENST00000641597		M0QZK8	103 aa		13.17	□□□□□ -0.3
PHGDH-223	ENST00000641597	NDUFA3	O95167	84 aa		13.17	□□□□□ -0.3
PHGDH-223	ENST00000641597	ARPC1A	Q92747	370 aa		13.17	□□□□□ -0.3
PHGDH-223	ENST00000641597	TMUB1	Q9BVT8	246 aa		13.17	□□□□□ -0.3
PHGDH-223	ENST00000641597	PSG3	Q16557	428 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	FBXL19-AS1	Q494R0	122 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	NPB	Q8NG41	125 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	LAMTOR2	Q9Y2Q5	125 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	CSMD2	Q7Z408	3487 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	UTP20	O75691	2785 aa	Known RBP	13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	LINC00614	P0C842	121 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	PRTN3	P24158	256 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	TSPO	P30536	169 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	FXYD7	P58549	80 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	TIMD4	Q96H15	378 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	RNF5	Q99942	180 aa		13.16	□□□□□ -0.3
PHGDH-223	ENST00000641597	TRAV9-2	A0A087WT02	112 aa		13.15	□□□□□ -0.3
PHGDH-223	ENST00000641597	TMEM213	A2RRL7	107 aa		13.15	□□□□□ -0.3
PHGDH-223	ENST00000641597	C11orf71	Q6IPW1	123 aa		13.15	□□□□□ -0.3
PHGDH-223	ENST00000641597	TMEM70	Q9BUB7	260 aa		13.15	□□□□□ -0.3
PHGDH-223	ENST00000641597	GFRA4	Q9GZZ7	299 aa		13.15	□□□□□ -0.3
PHGDH-223	ENST00000641597	IGHV3OR16-13	A0A075B7E8	117 aa		13.15	□□□□□ -0.3
PHGDH-223	ENST00000641597	IGHV3-74	A0A0B4J1X5	117 aa		13.15	□□□□□ -0.3
PHGDH-223	ENST00000641597	DLEU1	O43261	78 aa		13.15	□□□□□ -0.3
PHGDH-223	ENST00000641597	C16orf54	Q6UWD8	224 aa		13.15	□□□□□ -0.3
PHGDH-223	ENST00000641597	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.14	□□□□□ -0.31
PHGDH-223	ENST00000641597	IGHV3-66	A0A0C4DH42	116 aa		13.14	□□□□□ -0.31
PHGDH-223	ENST00000641597		A0A1B0GUT8	65 aa		13.14	□□□□□ -0.31
PHGDH-223	ENST00000641597	OR4C46	A6NHA9	309 aa		13.14	□□□□□ -0.31
PHGDH-223	ENST00000641597	LEPROTL1	O95214	131 aa		13.14	□□□□□ -0.31
PHGDH-223	ENST00000641597	HAX1	O00165	279 aa		13.14	□□□□□ -0.31
PHGDH-223	ENST00000641597	EGR2	P11161	476 aa	Predicted RBP	13.14	□□□□□ -0.31
PHGDH-223	ENST00000641597	LOXL1	Q08397	574 aa	Predicted RBP	13.14	□□□□□ -0.31
PHGDH-223	ENST00000641597	TMEM75	Q8N9X5	138 aa		13.14	□□□□□ -0.31
PHGDH-223	ENST00000641597	C21orf62	Q9NYP8	219 aa		13.14	□□□□□ -0.31
PHGDH-223	ENST00000641597	LINC01548	A6NM66	108 aa		13.13	□□□□□ -0.31
PHGDH-223	ENST00000641597	SYS1-DBNDD2	H3BUS1	97 aa		13.13	□□□□□ -0.31
PHGDH-223	ENST00000641597	CEACAM3	P40198	252 aa		13.13	□□□□□ -0.31
PHGDH-223	ENST00000641597	ERAS	Q7Z444	233 aa		13.13	□□□□□ -0.31
PHGDH-223	ENST00000641597	LOC389332	A0A1B0GUA5	103 aa		13.13	□□□□□ -0.31
PHGDH-223	ENST00000641597	UNQ5815/PRO19632	Q6UWF5	114 aa		13.13	□□□□□ -0.31
PHGDH-223	ENST00000641597	ZNF562	Q6V9R5	426 aa		13.13	□□□□□ -0.31
PHGDH-223	ENST00000641597	VGLL1	Q99990	258 aa		13.13	□□□□□ -0.31
PHGDH-223	ENST00000641597	CTSG	P08311	255 aa		13.12	□□□□□ -0.31
PHGDH-223	ENST00000641597	ZNF80	P51504	273 aa	Predicted RBP	13.12	□□□□□ -0.31
PHGDH-223	ENST00000641597	MFAP4	P55083	255 aa		13.12	□□□□□ -0.31
PHGDH-223	ENST00000641597	FOXE3	Q13461	319 aa		13.12	□□□□□ -0.31
PHGDH-223	ENST00000641597	SMAD5-AS1	Q9Y6J3	95 aa		13.12	□□□□□ -0.31
PHGDH-223	ENST00000641597	SERTM2	A0A1B0GWG4	89 aa		13.12	□□□□□ -0.31
PHGDH-223	ENST00000641597	COL5A1-AS1	Q5SY13	56 aa		13.12	□□□□□ -0.31
PHGDH-223	ENST00000641597	NDFIP1	Q9BT67	221 aa		13.12	□□□□□ -0.31
PHGDH-223	ENST00000641597	GOLT1B	Q9Y3E0	138 aa		13.12	□□□□□ -0.31
PHGDH-223	ENST00000641597	CFAP46	Q8IYW2	2715 aa		13.12	□□□□□ -0.31
PHGDH-223	ENST00000641597	IGHV3-49	A0A0A0MS15	119 aa		13.11	□□□□□ -0.31
PHGDH-223	ENST00000641597	IGHV7-81	A0A0B4J1V7	117 aa		13.11	□□□□□ -0.31
PHGDH-223	ENST00000641597	TCTA	P57738	103 aa		13.11	□□□□□ -0.31
PHGDH-223	ENST00000641597	ECSCR	Q19T08	205 aa		13.11	□□□□□ -0.31
PHGDH-223	ENST00000641597	LYZL1	Q6UWQ5	148 aa		13.11	□□□□□ -0.31

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