RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 SOCS3O14543 225 aa11.31□□□□□ -0.6
PAX6-268ENST00000640287 IGLC2P0DOY2 106 aa11.31□□□□□ -0.6
PAX6-268ENST00000640287 SPP1P10451 314 aa11.31□□□□□ -0.6
PAX6-268ENST00000640287 NKX2-5P52952 324 aaPredicted RBP11.31□□□□□ -0.6
PAX6-268ENST00000640287 ZNF124Q15973 351 aa11.31□□□□□ -0.6
PAX6-268ENST00000640287 LCN15Q6UWW0 184 aa11.31□□□□□ -0.6
PAX6-268ENST00000640287 BAP18Q8IXM2 172 aa11.31□□□□□ -0.6
PAX6-268ENST00000640287 C17orf77Q96MU5 243 aa11.31□□□□□ -0.6
PAX6-268ENST00000640287 PAXXQ9BUH6 204 aa11.31□□□□□ -0.6
PAX6-268ENST00000640287 H3BQ15 152 aa11.3□□□□□ -0.6
PAX6-268ENST00000640287 HMGB3O15347 200 aaKnown RBP11.3□□□□□ -0.6
PAX6-268ENST00000640287 OR10J4P0C629 311 aa11.3□□□□□ -0.6
PAX6-268ENST00000640287 FRMD6-AS1P0C7T7 363 aa11.3□□□□□ -0.6
PAX6-268ENST00000640287 IGFL4Q6B9Z1 124 aa11.3□□□□□ -0.6
PAX6-268ENST00000640287 RPP25LQ8N5L8 163 aaKnown RBP11.3□□□□□ -0.6
PAX6-268ENST00000640287 BLNKQ8WV28 456 aa11.3□□□□□ -0.6
PAX6-268ENST00000640287 FAM167A-AS1Q96KT0 104 aa11.3□□□□□ -0.6
PAX6-268ENST00000640287 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
PAX6-268ENST00000640287 RPRMQ9NS64 109 aa11.3□□□□□ -0.6
PAX6-268ENST00000640287 HIST1H1EP10412 219 aaKnown RBP11.29□□□□□ -0.6
PAX6-268ENST00000640287 UBE2L3P68036 154 aaKnown RBP11.29□□□□□ -0.6
PAX6-268ENST00000640287 GUK1Q16774 197 aa11.29□□□□□ -0.6
PAX6-268ENST00000640287 RNF182Q8N6D2 247 aa11.29□□□□□ -0.6
PAX6-268ENST00000640287 CITED4Q96RK1 184 aa11.29□□□□□ -0.6
PAX6-268ENST00000640287 SLC50A1Q9BRV3 221 aa11.29□□□□□ -0.6
PAX6-268ENST00000640287 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
PAX6-268ENST00000640287 A8MZ25 164 aa11.28□□□□□ -0.6
PAX6-268ENST00000640287 SLC17A3O00476 420 aa11.28□□□□□ -0.6
PAX6-268ENST00000640287 SEC11BP0C7V7 166 aa11.28□□□□□ -0.6
PAX6-268ENST00000640287 ACTL10Q5JWF8 245 aa11.28□□□□□ -0.6
PAX6-268ENST00000640287 SLC51BQ86UW2 128 aa11.28□□□□□ -0.6
PAX6-268ENST00000640287 STHQ8IWL8 128 aa11.28□□□□□ -0.6
PAX6-268ENST00000640287 STOML3Q8TAV4 291 aa11.28□□□□□ -0.6
PAX6-268ENST00000640287 RNF141Q8WVD5 230 aa11.28□□□□□ -0.6
PAX6-268ENST00000640287 LOC102724200A0A096LPH7 203 aaPredicted RBP11.27□□□□□ -0.6
PAX6-268ENST00000640287 TRAV8-2A0A0B4J237 113 aa11.27□□□□□ -0.6
PAX6-268ENST00000640287 KNCNA6PVL3 124 aa11.27□□□□□ -0.6
PAX6-268ENST00000640287 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.6
PAX6-268ENST00000640287 EIF5AL1Q6IS14 154 aaKnown RBP11.27□□□□□ -0.6
PAX6-268ENST00000640287 PQLC2Q6ZP29 291 aa11.27□□□□□ -0.6
PAX6-268ENST00000640287 ZNF738Q8NE65 137 aa11.27□□□□□ -0.6
PAX6-268ENST00000640287 TMED6Q8WW62 240 aa11.27□□□□□ -0.6
PAX6-268ENST00000640287 RAB24Q969Q5 203 aa11.27□□□□□ -0.6
PAX6-268ENST00000640287 C20orf173Q96LM9 149 aa11.27□□□□□ -0.6
PAX6-268ENST00000640287 ZNF331Q9NQX6 463 aaPredicted RBP11.27□□□□□ -0.6
PAX6-268ENST00000640287 TRBV19A0A075B6N1 114 aa11.26□□□□□ -0.61
PAX6-268ENST00000640287 NBEAP1P0C6P0 100 aa11.26□□□□□ -0.61
PAX6-268ENST00000640287 PSG9Q00887 426 aa11.26□□□□□ -0.61
PAX6-268ENST00000640287 IQCF2Q8IXL9 164 aa11.26□□□□□ -0.61
PAX6-268ENST00000640287 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
PAX6-268ENST00000640287 PRKDCP78527 4128 aaKnown RBP11.26□□□□□ -0.61
PAX6-268ENST00000640287 CTXND1A0A1B0GTU2 59 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 RBMY1BA6NDE4 496 aaKnown RBP11.25□□□□□ -0.61
PAX6-268ENST00000640287 RBMY1EA6NEQ0 496 aaKnown RBP11.25□□□□□ -0.61
PAX6-268ENST00000640287 UMAD1C9J7I0 102 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 RBMY1DP0C7P1 496 aaKnown RBP11.25□□□□□ -0.61
PAX6-268ENST00000640287 ARL14EPLP0DKL9 152 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 HLA-DMBP28068 263 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 DEFB1P60022 68 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 PDE6HQ13956 83 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 EBLN2Q6P2I7 272 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 SAT2Q96F10 170 aaPredicted RBP11.25□□□□□ -0.61
PAX6-268ENST00000640287 ZNF503Q96F45 646 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 ASCL2Q99929 193 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 AAMDCQ9H7C9 122 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 ZNF253O75346 499 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 CXorf1O96002 111 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 STAG3L2P0CL84 134 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 STAG3L3P0CL85 134 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 PSG3Q16557 428 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 FOXI2Q6ZQN5 318 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 SSX7Q7RTT5 188 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 FAM213BQ8TBF2 198 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 B9D2Q9BPU9 175 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 CLEC5AQ9NY25 188 aa11.25□□□□□ -0.61
PAX6-268ENST00000640287 F6UB75 175 aa11.24□□□□□ -0.61
PAX6-268ENST00000640287 PRB4P10163 310 aaPredicted RBP11.24□□□□□ -0.61
PAX6-268ENST00000640287 APOC4P55056 127 aa11.24□□□□□ -0.61
PAX6-268ENST00000640287 ZNF726P1Q15940 193 aa11.24□□□□□ -0.61
PAX6-268ENST00000640287 GDF5OSQ5U4N7 250 aa11.24□□□□□ -0.61
PAX6-268ENST00000640287 EXOC3-AS1Q8N2X6 119 aa11.24□□□□□ -0.61
PAX6-268ENST00000640287 PHYHIPLQ96FC7 376 aa11.24□□□□□ -0.61
PAX6-268ENST00000640287 SAV1Q9H4B6 383 aaPredicted RBP11.24□□□□□ -0.61
PAX6-268ENST00000640287 BOLA1Q9Y3E2 137 aa11.24□□□□□ -0.61
PAX6-268ENST00000640287 MAP1LC3B2A6NCE7 125 aa11.23□□□□□ -0.61
PAX6-268ENST00000640287 NDUFB4O95168 129 aa11.23□□□□□ -0.61
PAX6-268ENST00000640287 IGKV3-20P01619 116 aa11.23□□□□□ -0.61
PAX6-268ENST00000640287 HLA-DRB4P13762 266 aa11.23□□□□□ -0.61
PAX6-268ENST00000640287 FHITP49789 147 aa11.23□□□□□ -0.61
PAX6-268ENST00000640287 FGF8P55075 233 aaPredicted RBP11.23□□□□□ -0.61
PAX6-268ENST00000640287 RANP62826 216 aaKnown RBP11.23□□□□□ -0.61
PAX6-268ENST00000640287 HAGHQ16775 308 aa11.23□□□□□ -0.61
PAX6-268ENST00000640287 SBSPONQ8IVN8 264 aa11.23□□□□□ -0.61
PAX6-268ENST00000640287 OR4B1Q8NGF8 309 aa11.23□□□□□ -0.61
PAX6-268ENST00000640287 RPUSD4Q96CM3 377 aaKnown RBP11.23□□□□□ -0.61
PAX6-268ENST00000640287 MAP1LC3BQ9GZQ8 125 aa11.23□□□□□ -0.61
PAX6-268ENST00000640287 HLA-DRB4X5D2U9 266 aa11.23□□□□□ -0.61
PAX6-268ENST00000640287 ZNF705FA8MVS1 300 aaPredicted RBP11.22□□□□□ -0.61
PAX6-268ENST00000640287 BOLA2-SMG1P6H3BVE0 249 aa11.22□□□□□ -0.61
PAX6-268ENST00000640287 GCHFRP30047 84 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms