RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 FAM223BA6NKX1 122 aa10.93□□□□□ -0.66
SCARB2-215ENST00000639145 OR11H12B2RN74 326 aa10.93□□□□□ -0.66
SCARB2-215ENST00000639145 LEPP41159 167 aa10.93□□□□□ -0.66
SCARB2-215ENST00000639145 FAM223AQ8IWN6 122 aa10.93□□□□□ -0.66
SCARB2-215ENST00000639145 LINC00311Q8N616 119 aa10.93□□□□□ -0.66
SCARB2-215ENST00000639145 CARHSP1Q9Y2V2 147 aaKnown RBP10.93□□□□□ -0.66
SCARB2-215ENST00000639145 CEP192Q8TEP8 1941 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 TRAV12-3A0A0B4J271 114 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 J3QLI3 93 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 APOHP02749 345 aaPredicted RBP10.92□□□□□ -0.66
SCARB2-215ENST00000639145 WT1-ASQ06250 92 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 NDUFA4L2Q9NRX3 87 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 FGF16O43320 207 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 RPL13AP40429 203 aaKnown RBP10.92□□□□□ -0.66
SCARB2-215ENST00000639145 DEFB131AP59861 70 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 TCF23Q7RTU1 214 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 FAM110DQ8TAY7 271 aaPredicted RBP10.92□□□□□ -0.66
SCARB2-215ENST00000639145 KLF2Q9Y5W3 355 aaPredicted RBP10.92□□□□□ -0.66
SCARB2-215ENST00000639145 A0A087X0M5 115 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 A0A1B0GX30 115 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 C9orf139Q6ZV77 190 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 MSMPQ1L6U9 139 aa10.92□□□□□ -0.66
SCARB2-215ENST00000639145 TRBV9A0A0B4J1U6 114 aa10.91□□□□□ -0.66
SCARB2-215ENST00000639145 M0R143 59 aa10.91□□□□□ -0.66
SCARB2-215ENST00000639145 TCRAP04437 139 aa10.91□□□□□ -0.66
SCARB2-215ENST00000639145 Q6AWC8 147 aa10.91□□□□□ -0.66
SCARB2-215ENST00000639145 LCN12Q6JVE5 192 aa10.91□□□□□ -0.66
SCARB2-215ENST00000639145 C5orf52A6NGY3 159 aa10.91□□□□□ -0.66
SCARB2-215ENST00000639145 TMEM170BQ5T4T1 132 aa10.91□□□□□ -0.66
SCARB2-215ENST00000639145 ORMDL3Q8N138 153 aa10.91□□□□□ -0.66
SCARB2-215ENST00000639145 DEFB104AQ8WTQ1 72 aa10.91□□□□□ -0.66
SCARB2-215ENST00000639145 GCSHP23434 173 aa10.9□□□□□ -0.66
SCARB2-215ENST00000639145 PAPPA-AS1Q5QFB9 102 aa10.9□□□□□ -0.66
SCARB2-215ENST00000639145 H7C2G1 150 aa10.9□□□□□ -0.66
SCARB2-215ENST00000639145 ZNF138P52744 262 aa10.9□□□□□ -0.66
SCARB2-215ENST00000639145 TOMM40O96008 361 aa10.9□□□□□ -0.66
SCARB2-215ENST00000639145 IGHV4-38-2P0DP08 117 aa10.9□□□□□ -0.66
SCARB2-215ENST00000639145 FAM19A2Q8N3H0 131 aa10.9□□□□□ -0.66
SCARB2-215ENST00000639145 OR11H1Q8NG94 326 aa10.9□□□□□ -0.66
SCARB2-215ENST00000639145 FOLR2P14207 255 aa10.9□□□□□ -0.67
SCARB2-215ENST00000639145 C1QL4Q86Z23 238 aa10.9□□□□□ -0.67
SCARB2-215ENST00000639145 TMEM160Q9NX00 188 aa10.9□□□□□ -0.67
SCARB2-215ENST00000639145 ARHGAP32A7KAX9 2087 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 IZUMO1RA6ND01 250 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 RNF151Q2KHN1 245 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 MEIG1Q5JSS6 88 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 LINC00479Q96M42 142 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 PRORYQ9H606 182 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 OSTCQ9NRP0 149 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 TOMM7Q9P0U1 55 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 ACANP16112 2415 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 IGHV3-73A0A0B4J1V6 119 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 GFI1BQ5VTD9 330 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 SRSF8Q9BRL6 282 aaKnown RBP10.89□□□□□ -0.67
SCARB2-215ENST00000639145 IGHV3-53P01767 116 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 TMEM95Q3KNT9 176 aa10.89□□□□□ -0.67
SCARB2-215ENST00000639145 PPP1R17O96001 155 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 TMEM101Q96IK0 257 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 ANAPC10Q9UM13 185 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 FRYLO94915 3013 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 LHBP01229 141 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 Q8NFD4 153 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 NUDT10Q8NFP7 164 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 NUDT11Q96G61 164 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 SCGB3A1Q96QR1 104 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 NRN1Q9NPD7 142 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 TRGV1A0A0A0MS02 117 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 SMIM6P0DI80 62 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 C10orf105Q8TEF2 133 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 CD5P06127 495 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 OR10J3Q5JRS4 329 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 ARL6IP6Q8N6S5 226 aa10.88□□□□□ -0.67
SCARB2-215ENST00000639145 C22orf34Q6ZV56 151 aa10.87□□□□□ -0.67
SCARB2-215ENST00000639145 ZNF106Q9H2Y7 1883 aaKnown RBP10.87□□□□□ -0.67
SCARB2-215ENST00000639145 TRGV11A0A075B6L2 103 aa10.87□□□□□ -0.67
SCARB2-215ENST00000639145 EVI2AP22794 236 aa10.87□□□□□ -0.67
SCARB2-215ENST00000639145 JKAMPQ9P055 326 aa10.87□□□□□ -0.67
SCARB2-215ENST00000639145 C19orf84I3L1E1 186 aa10.87□□□□□ -0.67
SCARB2-215ENST00000639145 TCF21O43680 179 aa10.87□□□□□ -0.67
SCARB2-215ENST00000639145 ZNF25P17030 456 aaPredicted RBP10.87□□□□□ -0.67
SCARB2-215ENST00000639145 PAX9P55771 341 aa10.87□□□□□ -0.67
SCARB2-215ENST00000639145 DAZAP2Q15038 168 aaPredicted RBP10.87□□□□□ -0.67
SCARB2-215ENST00000639145 RNF182Q8N6D2 247 aa10.87□□□□□ -0.67
SCARB2-215ENST00000639145 ZNF414Q96IQ9 312 aa10.87□□□□□ -0.67
SCARB2-215ENST00000639145 SHANK2-AS3Q9BTD1 123 aa10.87□□□□□ -0.67
SCARB2-215ENST00000639145 CHD3Q12873 2000 aaKnown RBP10.86□□□□□ -0.67
SCARB2-215ENST00000639145 TRAV8-6A0A0B4J262 113 aa10.86□□□□□ -0.67
SCARB2-215ENST00000639145 HOXB4P17483 251 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-215ENST00000639145 LGALS3P17931 250 aaKnown RBP10.86□□□□□ -0.67
SCARB2-215ENST00000639145 TCTEX1D4Q5JR98 221 aa10.86□□□□□ -0.67
SCARB2-215ENST00000639145 XCL2Q9UBD3 114 aa10.86□□□□□ -0.67
SCARB2-215ENST00000639145 ARHGAP21Q5T5U3 1957 aa10.86□□□□□ -0.67
SCARB2-215ENST00000639145 CMC4P56277 68 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-215ENST00000639145 FBXL19-AS1Q494R0 122 aa10.86□□□□□ -0.67
SCARB2-215ENST00000639145 RCHY1Q96PM5 261 aa10.86□□□□□ -0.67
SCARB2-215ENST00000639145 SOX21Q9Y651 276 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-215ENST00000639145 MAP1AP78559 2803 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-215ENST00000639145 BLCAPP62952 87 aa10.86□□□□□ -0.67
SCARB2-215ENST00000639145 ERCC8Q13216 396 aa10.86□□□□□ -0.67
SCARB2-215ENST00000639145 TNRC6AQ8NDV7 1962 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms