RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 TCTAP57738 103 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 FXYD7P58549 80 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 OCIAD2Q56VL3 154 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 S4R3C0 116 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 MGAQ8IWI9 3026 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 D6R8Y8 96 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 BUB1B-PAK6H3BSN5 160 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 K7EIM0 57 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 C7orf71A4D174 169 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 K7EQM0 130 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 PPBPP02775 128 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 UQCRFS1P47985 274 aa8.61□□□□□ -1.03
SNIP1-204ENST00000638725 RPS20P60866 119 aaKnown RBP8.61□□□□□ -1.03
SNIP1-204ENST00000638725 BCL6BQ8N143 479 aaPredicted RBP8.61□□□□□ -1.03
SNIP1-204ENST00000638725 ADGRG4Q8IZF6 3080 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 ZZEF1O43149 2961 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 IL4P05112 153 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 FGF6P10767 208 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 LYZL1Q6UWQ5 148 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 AMN1Q8IY45 258 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 ZNF491Q8N8L2 437 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 TNFRSF14Q92956 283 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 RPEQ96AT9 228 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 VPS25Q9BRG1 176 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 SIGLEC8Q9NYZ4 499 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 PEF1Q9UBV8 284 aaKnown RBP8.6□□□□□ -1.03
SNIP1-204ENST00000638725 EP300Q09472 2414 aaPredicted RBP8.6□□□□□ -1.03
SNIP1-204ENST00000638725 CNOT1A5YKK6 2376 aaKnown RBP8.6□□□□□ -1.03
SNIP1-204ENST00000638725 PCNX1Q96RV3 2341 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 A0A1B0GW15 77 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 LYNX1G3V0Z9 82 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 MRPS12O15235 138 aaKnown RBP8.6□□□□□ -1.03
SNIP1-204ENST00000638725 CNIH1O95406 144 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 LYNX1P0DP58 116 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 FCGR2BP31994 310 aaPredicted RBP8.6□□□□□ -1.03
SNIP1-204ENST00000638725 TMEM97Q5BJF2 176 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 RNF125Q96EQ8 232 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 ZNF414Q96IQ9 312 aa8.6□□□□□ -1.03
SNIP1-204ENST00000638725 BDP1A6H8Y1 2624 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 CUL9Q8IWT3 2517 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 ZGRF1Q86YA3 2104 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 A0A1W2PRD5 423 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 A0A1W2PRF3 423 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 A0A1W2PRM7 423 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 NHLH1Q02575 133 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 Q6AWC8 147 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 ZNF493Q6ZR52 646 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 IGFBPL1Q8WX77 278 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 PRELID3AQ96N28 172 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 RALYQ9UKM9 306 aaKnown RBP8.59□□□□□ -1.03
SNIP1-204ENST00000638725 KALRNO60229 2985 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 GAGE12BA1L429 117 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 E7EQL1 145 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 CT45A10P0DMU9 189 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 APOBEC3AP31941 199 aaPredicted RBP8.59□□□□□ -1.03
SNIP1-204ENST00000638725 CACNG7P62955 275 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 KLF17Q5JT82 389 aaPredicted RBP8.59□□□□□ -1.03
SNIP1-204ENST00000638725 RABAC1Q9UI14 185 aa8.59□□□□□ -1.03
SNIP1-204ENST00000638725 MAP1BP46821 2468 aaKnown RBP8.58□□□□□ -1.04
SNIP1-204ENST00000638725 FAM104BQ5XKR9 115 aa8.58□□□□□ -1.04
SNIP1-204ENST00000638725 LYPD1Q8N2G4 141 aa8.58□□□□□ -1.04
SNIP1-204ENST00000638725 SELENOKQ9Y6D0 94 aa8.58□□□□□ -1.04
SNIP1-204ENST00000638725 CACNA1HO95180 2353 aa8.58□□□□□ -1.04
SNIP1-204ENST00000638725 TMEM189A5PLL7 270 aa8.58□□□□□ -1.04
SNIP1-204ENST00000638725 SHISA9B4DS77 424 aa8.58□□□□□ -1.04
SNIP1-204ENST00000638725 SEC11AP67812 179 aa8.58□□□□□ -1.04
SNIP1-204ENST00000638725 DMXL1Q9Y485 3027 aa8.58□□□□□ -1.04
SNIP1-204ENST00000638725 VSTM5A8MXK1 200 aa8.57□□□□□ -1.04
SNIP1-204ENST00000638725 SMKR1H3BMG3 65 aa8.57□□□□□ -1.04
SNIP1-204ENST00000638725 PRRG2O14669 202 aa8.57□□□□□ -1.04
SNIP1-204ENST00000638725 TIMM23O14925 209 aa8.57□□□□□ -1.04
SNIP1-204ENST00000638725 SH2D1AO60880 128 aa8.57□□□□□ -1.04
SNIP1-204ENST00000638725 NAA38Q9BRA0 125 aaKnown RBP8.57□□□□□ -1.04
SNIP1-204ENST00000638725 LGALS9BQ3B8N2 356 aa8.57□□□□□ -1.04
SNIP1-204ENST00000638725 MRPL51Q4U2R6 128 aaKnown RBP8.57□□□□□ -1.04
SNIP1-204ENST00000638725 LGALS9CQ6DKI2 356 aa8.57□□□□□ -1.04
SNIP1-204ENST00000638725 ORMDL3Q8N138 153 aa8.57□□□□□ -1.04
SNIP1-204ENST00000638725 HILPDAQ9Y5L2 63 aa8.57□□□□□ -1.04
SNIP1-204ENST00000638725 U3KQK5 164 aa8.57□□□□□ -1.04
SNIP1-204ENST00000638725 IGKV2-40A0A087WW87 121 aaPredicted RBP8.56□□□□□ -1.04
SNIP1-204ENST00000638725 PPIAL4CA0A0B4J2A2 164 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 IGKV2D-40P01614 121 aaPredicted RBP8.56□□□□□ -1.04
SNIP1-204ENST00000638725 PPIAL4GP0DN37 164 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 JMJD8Q96S16 334 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 THYN1Q9P016 225 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 OTOGLQ3ZCN5 2332 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 WI2-2373I1.2A0A1W2PRP0 233 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 GAGE10A6NGK3 116 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 WFDC3Q8IUB2 231 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 DPF1Q92782 380 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 AAMDCQ9H7C9 122 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 GNG7O60262 68 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 NPYP01303 97 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 HBDP02042 147 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 IGF2-ASQ6U949 168 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 GFRALQ6UXV0 394 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 BOD1L2Q8IYS8 172 aa8.56□□□□□ -1.04
SNIP1-204ENST00000638725 LY6LH3BQJ8 138 aa8.55□□□□□ -1.04
SNIP1-204ENST00000638725 H3BUT2 72 aa8.55□□□□□ -1.04
SNIP1-204ENST00000638725 SMAD7O15105 426 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms