RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 C8orf49Q96NF6 230 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 SIP14410 1827 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 C9JAW5 83 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 IGHV2-5P01817 119 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 ZNF492Q9P255 531 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 OOSP1A8MZH6 123 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 ZNF415Q09FC8 603 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 SPXQ9BT56 116 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 A0A1W2PPI3 338 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 NPSP0C0P6 89 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 TMEM75Q8N9X5 138 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 TIMM21Q9BVV7 248 aa14.97□□□□□ -0.01
SCARB2-213ENST00000638680 IGHV3-53P01767 116 aa14.96□□□□□ -0.01
SCARB2-213ENST00000638680 JPT2Q9H910 190 aa14.96□□□□□ -0.01
SCARB2-213ENST00000638680 TRGV1A0A0A0MS02 117 aa14.96□□□□□ -0.01
SCARB2-213ENST00000638680 PRADC1Q9BSG0 188 aa14.96□□□□□ -0.01
SCARB2-213ENST00000638680 E9PQ18 207 aa14.96□□□□□ -0.01
SCARB2-213ENST00000638680 IGLC2P0DOY2 106 aa14.95□□□□□ -0.02
SCARB2-213ENST00000638680 IGLC3P0DOY3 106 aa14.95□□□□□ -0.02
SCARB2-213ENST00000638680 RPL36AP83881 106 aaKnown RBP14.95□□□□□ -0.02
SCARB2-213ENST00000638680 RPL36ALQ969Q0 106 aaKnown RBP14.95□□□□□ -0.02
SCARB2-213ENST00000638680 C1orf147Q96MC9 270 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-213ENST00000638680 BRD3OSQ6XYD6 125 aa14.95□□□□□ -0.02
SCARB2-213ENST00000638680 EDA2RQ9HAV5 297 aa14.95□□□□□ -0.02
SCARB2-213ENST00000638680 LRRK1Q38SD2 2015 aa14.95□□□□□ -0.02
SCARB2-213ENST00000638680 ITGB1BP1O14713 200 aa14.95□□□□□ -0.02
SCARB2-213ENST00000638680 M0R1W7 72 aa14.95□□□□□ -0.02
SCARB2-213ENST00000638680 MAJINQ3KP22 176 aa14.95□□□□□ -0.02
SCARB2-213ENST00000638680 TMEM14BQ9NUH8 114 aa14.94□□□□□ -0.02
SCARB2-213ENST00000638680 A0A0G2JNJ9 132 aa14.94□□□□□ -0.02
SCARB2-213ENST00000638680 Q9UFV3 132 aa14.94□□□□□ -0.02
SCARB2-213ENST00000638680 V9GYV3 84 aa14.94□□□□□ -0.02
SCARB2-213ENST00000638680 SLAQ13239 276 aa14.94□□□□□ -0.02
SCARB2-213ENST00000638680 NSUN5P1Q3KNT7 163 aa14.94□□□□□ -0.02
SCARB2-213ENST00000638680 PRSS57Q6UWY2 283 aa14.94□□□□□ -0.02
SCARB2-213ENST00000638680 C1orf159Q96HA4 380 aa14.94□□□□□ -0.02
SCARB2-213ENST00000638680 LAMTOR3Q9UHA4 124 aa14.94□□□□□ -0.02
SCARB2-213ENST00000638680 EFNA4P52798 201 aa14.94□□□□□ -0.02
SCARB2-213ENST00000638680 ZNF48Q96MX3 618 aaPredicted RBP14.94□□□□□ -0.02
SCARB2-213ENST00000638680 MYMXA0A1B0GTQ4 84 aa14.93□□□□□ -0.02
SCARB2-213ENST00000638680 RSPO3Q9BXY4 272 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-213ENST00000638680 LEPROTO15243 131 aa14.93□□□□□ -0.02
SCARB2-213ENST00000638680 PDE6HQ13956 83 aa14.93□□□□□ -0.02
SCARB2-213ENST00000638680 H3BUX3 64 aa14.93□□□□□ -0.02
SCARB2-213ENST00000638680 IGKV1-39P01597 117 aa14.93□□□□□ -0.02
SCARB2-213ENST00000638680 IGKV1D-39P04432 117 aa14.93□□□□□ -0.02
SCARB2-213ENST00000638680 COL8A2P25067 703 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 SPACA3Q8IXA5 215 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 ZNF625Q96I27 306 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-213ENST00000638680 SCN5AQ14524 2016 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 PTPRDP23468 1912 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 C9orf118A6NHY6 69 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 PRSS46E5RG02 174 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 WISP1O95388 367 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 FAM104BQ5XKR9 115 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 GAGE2AQ6NT46 116 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 ZNF114Q8NC26 417 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 TRAV13-1A0A0B4J241 112 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 IGHV1-24A0A0C4DH33 117 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 RHPN1-AS1Q9BWJ2 59 aa14.92□□□□□ -0.02
SCARB2-213ENST00000638680 YPEL3P61236 119 aaPredicted RBP14.91□□□□□ -0.02
SCARB2-213ENST00000638680 CT83Q5H943 113 aa14.91□□□□□ -0.02
SCARB2-213ENST00000638680 FAM223BA6NKX1 122 aa14.91□□□□□ -0.02
SCARB2-213ENST00000638680 FAM223AQ8IWN6 122 aa14.91□□□□□ -0.02
SCARB2-213ENST00000638680 SMIM27A0A1W2PRY6 76 aa14.91□□□□□ -0.02
SCARB2-213ENST00000638680 SAP30O75446 220 aa14.91□□□□□ -0.02
SCARB2-213ENST00000638680 LY6G5BQ8NDX9 201 aa14.91□□□□□ -0.02
SCARB2-213ENST00000638680 MBD3L4A6NDZ8 208 aaPredicted RBP14.91□□□□□ -0.02
SCARB2-213ENST00000638680 MBD3L3A6NE82 208 aaPredicted RBP14.91□□□□□ -0.02
SCARB2-213ENST00000638680 MBD3L5A6NJ08 208 aaPredicted RBP14.91□□□□□ -0.02
SCARB2-213ENST00000638680 DTX2Q86UW9 622 aa14.91□□□□□ -0.02
SCARB2-213ENST00000638680 MBD3L2Q8NHZ7 208 aaPredicted RBP14.91□□□□□ -0.02
SCARB2-213ENST00000638680 NDUFA4L2Q9NRX3 87 aa14.9□□□□□ -0.02
SCARB2-213ENST00000638680 SBF1O95248 1867 aa14.9□□□□□ -0.02
SCARB2-213ENST00000638680 IL17RELQ6ZVW7 336 aa14.9□□□□□ -0.02
SCARB2-213ENST00000638680 MED12Q93074 2177 aa14.9□□□□□ -0.02
SCARB2-213ENST00000638680 A0A087WX48 190 aa14.9□□□□□ -0.02
SCARB2-213ENST00000638680 IGLL1P15814 213 aa14.9□□□□□ -0.02
SCARB2-213ENST00000638680 ARTNQ5T4W7 220 aa14.9□□□□□ -0.02
SCARB2-213ENST00000638680 TP53TG1Q9Y2A0 90 aa14.9□□□□□ -0.02
SCARB2-213ENST00000638680 CSRP1P21291 193 aaKnown RBP14.9□□□□□ -0.02
SCARB2-213ENST00000638680 SRSF8Q9BRL6 282 aaKnown RBP14.9□□□□□ -0.02
SCARB2-213ENST00000638680 SPTA1P02549 2419 aa14.9□□□□□ -0.02
SCARB2-213ENST00000638680 PRIMA1Q86XR5 153 aa14.89□□□□□ -0.03
SCARB2-213ENST00000638680 USMG5Q96IX5 58 aa14.89□□□□□ -0.03
SCARB2-213ENST00000638680 LY6DQ14210 128 aa14.89□□□□□ -0.03
SCARB2-213ENST00000638680 Q8N8P6 123 aa14.89□□□□□ -0.03
SCARB2-213ENST00000638680 C6orf226Q5I0X4 101 aa14.89□□□□□ -0.03
SCARB2-213ENST00000638680 OVOL2Q9BRP0 275 aa14.89□□□□□ -0.03
SCARB2-213ENST00000638680 LY6HO94772 140 aa14.88□□□□□ -0.03
SCARB2-213ENST00000638680 ASPHD1Q5U4P2 390 aa14.88□□□□□ -0.03
SCARB2-213ENST00000638680 SLC25A16P16260 332 aa14.88□□□□□ -0.03
SCARB2-213ENST00000638680 KLF12Q9Y4X4 402 aa14.88□□□□□ -0.03
SCARB2-213ENST00000638680 LMO1P25800 156 aa14.88□□□□□ -0.03
SCARB2-213ENST00000638680 VGLL1Q99990 258 aa14.88□□□□□ -0.03
SCARB2-213ENST00000638680 WDR90Q96KV7 1748 aa14.88□□□□□ -0.03
SCARB2-213ENST00000638680 MRPL51Q4U2R6 128 aaKnown RBP14.88□□□□□ -0.03
SCARB2-213ENST00000638680 TSSC4Q9Y5U2 329 aaPredicted RBP14.88□□□□□ -0.03
SCARB2-213ENST00000638680 TRBV19A0A075B6N1 114 aa14.88□□□□□ -0.03
SCARB2-213ENST00000638680 PIP4P2Q8N4L2 257 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms