RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 PEBP1P30086 187 aaKnown RBP12.49□□□□□ -0.41
UBE3A-227ENST00000638011 TMEM14EPQ6UXP3 125 aa12.49□□□□□ -0.41
UBE3A-227ENST00000638011 TCRAP04437 139 aa12.49□□□□□ -0.41
UBE3A-227ENST00000638011 MRPL55Q7Z7F7 128 aaKnown RBP12.48□□□□□ -0.41
UBE3A-227ENST00000638011 LIME1Q9H400 295 aa12.48□□□□□ -0.41
UBE3A-227ENST00000638011 ZNF319Q9P2F9 582 aa12.48□□□□□ -0.41
UBE3A-227ENST00000638011 LYZL1Q6UWQ5 148 aa12.48□□□□□ -0.41
UBE3A-227ENST00000638011 NAA38Q9BRA0 125 aaKnown RBP12.48□□□□□ -0.41
UBE3A-227ENST00000638011 ATP5J2P56134 94 aa12.48□□□□□ -0.41
UBE3A-227ENST00000638011 Q6ZVH6 145 aa12.48□□□□□ -0.41
UBE3A-227ENST00000638011 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 IGHV2OR16-5A0A0B4J2B6 119 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 TCF15Q12870 199 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 IMMP1LQ96LU5 166 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 TMEM133Q9H2Q1 129 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 IGHV2-70DA0A0C4DH43 119 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 F8VRH5 84 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 RPP25LQ8N5L8 163 aaKnown RBP12.47□□□□□ -0.41
UBE3A-227ENST00000638011 TMEM243Q9BU79 118 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 LOC102723996A0A087X1L8 192 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 IGHG2P01859 326 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 COX6B1P14854 86 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 HAMPP81172 84 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 LHFPL1Q86WI0 220 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 SHISA9B4DS77 424 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 PYYP10082 97 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 MP68P56378 58 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 SPSB2Q99619 263 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 DEPPQ9NTK1 212 aa12.47□□□□□ -0.41
UBE3A-227ENST00000638011 MBNL3Q9NUK0 354 aaKnown RBP12.47□□□□□ -0.41
UBE3A-227ENST00000638011 OOSP1A8MZH6 123 aa12.46□□□□□ -0.41
UBE3A-227ENST00000638011 ZNF876PQ49A33 203 aa12.46□□□□□ -0.41
UBE3A-227ENST00000638011 ZNF492Q9P255 531 aa12.46□□□□□ -0.41
UBE3A-227ENST00000638011 LSM4Q9Y4Z0 139 aaKnown RBP12.46□□□□□ -0.41
UBE3A-227ENST00000638011 C10orf91Q5T1B1 145 aa12.46□□□□□ -0.41
UBE3A-227ENST00000638011 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.46□□□□□ -0.41
UBE3A-227ENST00000638011 CD55P08174 381 aa12.46□□□□□ -0.42
UBE3A-227ENST00000638011 RCHY1Q96PM5 261 aa12.46□□□□□ -0.42
UBE3A-227ENST00000638011 FUSP35637 526 aaKnown RBP eCLIP12.45□□□□□ -0.42
UBE3A-227ENST00000638011 USMG5Q96IX5 58 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 CARD19Q96LW7 228 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 H0YIZ8 118 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 J3QRE1 110 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 HGFACQ04756 655 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 C18orf32Q8TCD1 76 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 PMS2P5A8MQ11 134 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 SIGLEC12Q96PQ1 595 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 ZNF71Q9NQZ8 489 aaPredicted RBP12.45□□□□□ -0.42
UBE3A-227ENST00000638011 hADV29S1A0JD25 119 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 NMSQ5H8A3 153 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 NPYP01303 97 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 SLC25A16P16260 332 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 IGLV3-21P80748 117 aaPredicted RBP12.45□□□□□ -0.42
UBE3A-227ENST00000638011 Q6ZS49 121 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 SIGLEC8Q9NYZ4 499 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 PRSS46E5RG02 174 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 C1QL2Q7Z5L3 287 aa12.45□□□□□ -0.42
UBE3A-227ENST00000638011 C15orf53Q8NAA6 179 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 IGFBPL1Q8WX77 278 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 ZNF625Q96I27 306 aaPredicted RBP12.44□□□□□ -0.42
UBE3A-227ENST00000638011 SRRM4A7MD48 611 aaKnown RBP12.44□□□□□ -0.42
UBE3A-227ENST00000638011 NBL1P41271 181 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 TIMM23O14925 209 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 SLC25A28Q96A46 364 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 SPXQ9BT56 116 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 A0A0U1RRA0 63 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 IGHV2-5P01817 119 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 MESP1Q9BRJ9 268 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 I3L3M4 83 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 CRYBA4P53673 196 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 FOXC1Q12948 553 aa12.44□□□□□ -0.42
UBE3A-227ENST00000638011 H3BMG7 143 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 HAX1O00165 279 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 HLA-DRB4P13762 266 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 HLA-DRB4X5D2U9 266 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 SMIM10L1P0DMW3 83 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 TMEM52Q8NDY8 209 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 SMIM10Q96HG1 83 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 TTC28Q96AY4 2481 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 TRBV6-6A0A0A6YYG2 114 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 TEN1Q86WV5 123 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 DMRTC2Q8IXT2 367 aaPredicted RBP12.43□□□□□ -0.42
UBE3A-227ENST00000638011 CELA2BP08218 269 aaPredicted RBP12.43□□□□□ -0.42
UBE3A-227ENST00000638011 NDUFB8O95169 186 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 LINC00114Q6XXX2 140 aa12.43□□□□□ -0.42
UBE3A-227ENST00000638011 RNF166Q96A37 237 aaPredicted RBP12.43□□□□□ -0.42
UBE3A-227ENST00000638011 VDAC2P45880 294 aaPredicted RBP12.42□□□□□ -0.42
UBE3A-227ENST00000638011 C5orf47Q569G3 176 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 Q8N8P6 123 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 NKAPP1Q8N9T2 125 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 IGHV3-49A0A0A0MS15 119 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 IGHV3-66A0A0C4DH42 116 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 SH2D1AO60880 128 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 SPINK2P20155 84 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 SCRT1Q9BWW7 348 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 IGHV3OR16-13A0A075B7E8 117 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 IGHV3-74A0A0B4J1X5 117 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 TRAV40A0A0B4J280 105 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 IGHV3-35A0A0C4DH35 117 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 CRYBA2P53672 197 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms