RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 ZNF253O75346 499 aa16.65■□□□□ 0.26
CHRNA7-231ENST00000637786 ZNF688P0C7X2 276 aa16.65■□□□□ 0.26
CHRNA7-231ENST00000637786 PQLC2Q6ZP29 291 aa16.65■□□□□ 0.26
CHRNA7-231ENST00000637786 RAB24Q969Q5 203 aa16.65■□□□□ 0.26
CHRNA7-231ENST00000637786 C16orf92Q96LL3 132 aa16.65■□□□□ 0.26
CHRNA7-231ENST00000637786 SLC50A1Q9BRV3 221 aa16.65■□□□□ 0.26
CHRNA7-231ENST00000637786 PAXXQ9BUH6 204 aa16.65■□□□□ 0.26
CHRNA7-231ENST00000637786 OR7C2O60412 319 aa16.64■□□□□ 0.25
CHRNA7-231ENST00000637786 PDE6HQ13956 83 aa16.64■□□□□ 0.25
CHRNA7-231ENST00000637786 TMED6Q8WW62 240 aa16.64■□□□□ 0.25
CHRNA7-231ENST00000637786 ZNF586Q9NXT0 402 aa16.64■□□□□ 0.25
CHRNA7-231ENST00000637786 UBQLN2Q9UHD9 624 aa16.64■□□□□ 0.25
CHRNA7-231ENST00000637786 STAG3L2P0CL84 134 aa16.63■□□□□ 0.25
CHRNA7-231ENST00000637786 STAG3L3P0CL85 134 aa16.63■□□□□ 0.25
CHRNA7-231ENST00000637786 PYYP10082 97 aa16.63■□□□□ 0.25
CHRNA7-231ENST00000637786 DEFB131AP59861 70 aa16.63■□□□□ 0.25
CHRNA7-231ENST00000637786 FXYD5Q96DB9 178 aa16.63■□□□□ 0.25
CHRNA7-231ENST00000637786 ZNF503Q96F45 646 aa16.63■□□□□ 0.25
CHRNA7-231ENST00000637786 ZNF331Q9NQX6 463 aaPredicted RBP16.63■□□□□ 0.25
CHRNA7-231ENST00000637786 TRBV19A0A075B6N1 114 aa16.62■□□□□ 0.25
CHRNA7-231ENST00000637786 CTXND1A0A1B0GTU2 59 aa16.62■□□□□ 0.25
CHRNA7-231ENST00000637786 PSMG4Q5JS54 123 aa16.62■□□□□ 0.25
CHRNA7-231ENST00000637786 DPPA3Q6W0C5 159 aa16.62■□□□□ 0.25
CHRNA7-231ENST00000637786 DEFB125Q8N687 156 aa16.62■□□□□ 0.25
CHRNA7-231ENST00000637786 LRRC20Q8TCA0 184 aa16.62■□□□□ 0.25
CHRNA7-231ENST00000637786 RNF141Q8WVD5 230 aa16.62■□□□□ 0.25
CHRNA7-231ENST00000637786 SAT2Q96F10 170 aaPredicted RBP16.62■□□□□ 0.25
CHRNA7-231ENST00000637786 WFDC10AQ9H1F0 79 aa16.62■□□□□ 0.25
CHRNA7-231ENST00000637786 CLEC5AQ9NY25 188 aa16.62■□□□□ 0.25
CHRNA7-231ENST00000637786 PLA2G2EQ9NZK7 142 aa16.62■□□□□ 0.25
CHRNA7-231ENST00000637786 TRAV8-2A0A0B4J237 113 aa16.61■□□□□ 0.25
CHRNA7-231ENST00000637786 NBEAP1P0C6P0 100 aa16.61■□□□□ 0.25
CHRNA7-231ENST00000637786 IGHV4-30-4P0DP06 118 aa16.61■□□□□ 0.25
CHRNA7-231ENST00000637786 MRAPQ8TCY5 172 aa16.61■□□□□ 0.25
CHRNA7-231ENST00000637786 OR10J4P0C629 311 aa16.6■□□□□ 0.25
CHRNA7-231ENST00000637786 RAB5CP51148 216 aa16.6■□□□□ 0.25
CHRNA7-231ENST00000637786 UBE2L3P68036 154 aaKnown RBP16.6■□□□□ 0.25
CHRNA7-231ENST00000637786 ZNF726P1Q15940 193 aa16.6■□□□□ 0.25
CHRNA7-231ENST00000637786 PHYHIPLQ96FC7 376 aa16.6■□□□□ 0.25
CHRNA7-231ENST00000637786 SRD5A3Q9H8P0 318 aa16.6■□□□□ 0.25
CHRNA7-231ENST00000637786 BOLA2-SMG1P6H3BVE0 249 aa16.59■□□□□ 0.25
CHRNA7-231ENST00000637786 SLC17A3O00476 420 aa16.59■□□□□ 0.25
CHRNA7-231ENST00000637786 CXorf1O96002 111 aa16.59■□□□□ 0.25
CHRNA7-231ENST00000637786 ARL14EPLP0DKL9 152 aa16.59■□□□□ 0.25
CHRNA7-231ENST00000637786 PSG9Q00887 426 aa16.59■□□□□ 0.25
CHRNA7-231ENST00000637786 APRG1Q8IVJ8 170 aa16.59■□□□□ 0.25
CHRNA7-231ENST00000637786 LINC00052Q96N35 136 aa16.59■□□□□ 0.25
CHRNA7-231ENST00000637786 TUBA4BQ9H853 241 aa16.59■□□□□ 0.25
CHRNA7-231ENST00000637786 BOLA1Q9Y3E2 137 aa16.59■□□□□ 0.25
CHRNA7-231ENST00000637786 H3BTX0 84 aa16.58■□□□□ 0.24
CHRNA7-231ENST00000637786 HMGB3O15347 200 aaKnown RBP16.58■□□□□ 0.24
CHRNA7-231ENST00000637786 EIF3GO75821 320 aaKnown RBP eCLIP16.58■□□□□ 0.24
CHRNA7-231ENST00000637786 NDUFB4O95168 129 aa16.58■□□□□ 0.24
CHRNA7-231ENST00000637786 SNRPCP09234 159 aaKnown RBP16.58■□□□□ 0.24
CHRNA7-231ENST00000637786 SSX7Q7RTT5 188 aa16.58■□□□□ 0.24
CHRNA7-231ENST00000637786 BLNKQ8WV28 456 aa16.58■□□□□ 0.24
CHRNA7-231ENST00000637786 C20orf173Q96LM9 149 aa16.58■□□□□ 0.24
CHRNA7-231ENST00000637786 CITED4Q96RK1 184 aa16.58■□□□□ 0.24
CHRNA7-231ENST00000637786 SULT1A2P50226 295 aa16.57■□□□□ 0.24
CHRNA7-231ENST00000637786 PSG3Q16557 428 aa16.57■□□□□ 0.24
CHRNA7-231ENST00000637786 DEFB121Q5J5C9 76 aa16.57■□□□□ 0.24
CHRNA7-231ENST00000637786 LYPD1Q8N2G4 141 aa16.57■□□□□ 0.24
CHRNA7-231ENST00000637786 SUN5Q8TC36 379 aa16.57■□□□□ 0.24
CHRNA7-231ENST00000637786 GCHFRP30047 84 aa16.56■□□□□ 0.24
CHRNA7-231ENST00000637786 FHITP49789 147 aa16.56■□□□□ 0.24
CHRNA7-231ENST00000637786 ZNF124Q15973 351 aa16.56■□□□□ 0.24
CHRNA7-231ENST00000637786 IGFL4Q6B9Z1 124 aa16.56■□□□□ 0.24
CHRNA7-231ENST00000637786 LINC00322Q6ZN03 302 aaPredicted RBP16.56■□□□□ 0.24
CHRNA7-231ENST00000637786 FOXI2Q6ZQN5 318 aa16.56■□□□□ 0.24
CHRNA7-231ENST00000637786 RNF182Q8N6D2 247 aa16.56■□□□□ 0.24
CHRNA7-231ENST00000637786 TMEM167BQ9NRX6 74 aa16.56■□□□□ 0.24
CHRNA7-231ENST00000637786 PRELID1Q9Y255 219 aa16.56■□□□□ 0.24
CHRNA7-231ENST00000637786 MAP1LC3B2A6NCE7 125 aa16.55■□□□□ 0.24
CHRNA7-231ENST00000637786 FRMD6-AS1P0C7T7 363 aa16.55■□□□□ 0.24
CHRNA7-231ENST00000637786 FAM213BQ8TBF2 198 aa16.55■□□□□ 0.24
CHRNA7-231ENST00000637786 MBD3L1Q8WWY6 194 aa16.55■□□□□ 0.24
CHRNA7-231ENST00000637786 MRPL53Q96EL3 112 aaKnown RBP16.55■□□□□ 0.24
CHRNA7-231ENST00000637786 MAP1LC3BQ9GZQ8 125 aa16.55■□□□□ 0.24
CHRNA7-231ENST00000637786 AAMDCQ9H7C9 122 aa16.55■□□□□ 0.24
CHRNA7-231ENST00000637786 AGRNO00468 2067 aa16.55■□□□□ 0.24
CHRNA7-231ENST00000637786 ZNF738Q8NE65 137 aa16.54■□□□□ 0.24
CHRNA7-231ENST00000637786 SAV1Q9H4B6 383 aaPredicted RBP16.54■□□□□ 0.24
CHRNA7-231ENST00000637786 RBMY1BA6NDE4 496 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-231ENST00000637786 RBMY1EA6NEQ0 496 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-231ENST00000637786 RBMY1DP0C7P1 496 aaKnown RBP16.53■□□□□ 0.24
CHRNA7-231ENST00000637786 HLA-DRB4P13762 266 aa16.53■□□□□ 0.24
CHRNA7-231ENST00000637786 HLA-DMBP28068 263 aa16.53■□□□□ 0.24
CHRNA7-231ENST00000637786 EBLN2Q6P2I7 272 aa16.53■□□□□ 0.24
CHRNA7-231ENST00000637786 STHQ8IWL8 128 aa16.53■□□□□ 0.24
CHRNA7-231ENST00000637786 HLA-DRB4X5D2U9 266 aa16.53■□□□□ 0.24
CHRNA7-231ENST00000637786 LOC102724200A0A096LPH7 203 aaPredicted RBP16.52■□□□□ 0.24
CHRNA7-231ENST00000637786 KNCNA6PVL3 124 aa16.52■□□□□ 0.24
CHRNA7-231ENST00000637786 H2AFB1P0C5Y9 115 aa16.52■□□□□ 0.24
CHRNA7-231ENST00000637786 ACTL10Q5JWF8 245 aa16.52■□□□□ 0.24
CHRNA7-231ENST00000637786 RPUSD4Q96CM3 377 aaKnown RBP16.52■□□□□ 0.24
CHRNA7-231ENST00000637786 CLUHP3Q96NS8 147 aa16.52■□□□□ 0.24
CHRNA7-231ENST00000637786 A0A0J9YX75 114 aa16.51■□□□□ 0.23
CHRNA7-231ENST00000637786 H3BMM0 161 aa16.51■□□□□ 0.23
CHRNA7-231ENST00000637786 RANP62826 216 aaKnown RBP16.51■□□□□ 0.23
CHRNA7-231ENST00000637786 TRPT1Q86TN4 253 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms