RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 GOSR2O14653 212 aa14.23□□□□□ -0.13
CLN6-222ENST00000637667 MRPS12O15235 138 aaKnown RBP14.23□□□□□ -0.13
CLN6-222ENST00000637667 PLA2G10O15496 165 aa14.23□□□□□ -0.13
CLN6-222ENST00000637667 UBE2DNLQ8IWF7 75 aa14.23□□□□□ -0.13
CLN6-222ENST00000637667 GGACTQ9BVM4 153 aa14.23□□□□□ -0.13
CLN6-222ENST00000637667 FAT2Q9NYQ8 4349 aa14.22□□□□□ -0.13
CLN6-222ENST00000637667 TRAV12-2A0A075B6T6 113 aa14.22□□□□□ -0.13
CLN6-222ENST00000637667 AGPAT2O15120 278 aa14.22□□□□□ -0.13
CLN6-222ENST00000637667 TSPOP30536 169 aa14.22□□□□□ -0.13
CLN6-222ENST00000637667 RHOBP62745 196 aa14.22□□□□□ -0.13
CLN6-222ENST00000637667 LGALS9BQ3B8N2 356 aa14.22□□□□□ -0.13
CLN6-222ENST00000637667 TMEM88Q6PEY1 159 aa14.22□□□□□ -0.13
CLN6-222ENST00000637667 DNAH2Q9P225 4427 aa14.22□□□□□ -0.13
CLN6-222ENST00000637667 LYRM9A8MSI8 78 aa14.21□□□□□ -0.13
CLN6-222ENST00000637667 CCSO14618 274 aa14.21□□□□□ -0.13
CLN6-222ENST00000637667 LYRM1O43325 122 aa14.21□□□□□ -0.13
CLN6-222ENST00000637667 ZNF846Q147U1 533 aa14.21□□□□□ -0.13
CLN6-222ENST00000637667 RPUSD4Q96CM3 377 aaKnown RBP14.21□□□□□ -0.13
CLN6-222ENST00000637667 PPP1R14DQ9NXH3 145 aa14.21□□□□□ -0.13
CLN6-222ENST00000637667 L7N2F9 121 aa14.2□□□□□ -0.14
CLN6-222ENST00000637667 CXCL2P19875 107 aa14.2□□□□□ -0.14
CLN6-222ENST00000637667 VAMP2P63027 116 aa14.2□□□□□ -0.14
CLN6-222ENST00000637667 LINC00305Q7Z4B0 112 aa14.2□□□□□ -0.14
CLN6-222ENST00000637667 MGST2Q99735 147 aa14.2□□□□□ -0.14
CLN6-222ENST00000637667 IGLV2-18A0A075B6J9 118 aa14.19□□□□□ -0.14
CLN6-222ENST00000637667 FAM25EA8MYX2 175 aa14.19□□□□□ -0.14
CLN6-222ENST00000637667 RTL8CO15255 209 aa14.19□□□□□ -0.14
CLN6-222ENST00000637667 COX7A2P2O60397 106 aa14.19□□□□□ -0.14
CLN6-222ENST00000637667 TCRBP04435 133 aa14.19□□□□□ -0.14
CLN6-222ENST00000637667 PRB4P10163 310 aaPredicted RBP14.19□□□□□ -0.14
CLN6-222ENST00000637667 RNF212Q495C1 297 aa14.19□□□□□ -0.14
CLN6-222ENST00000637667 LCN15Q6UWW0 184 aa14.19□□□□□ -0.14
CLN6-222ENST00000637667 TMEM256Q8N2U0 113 aa14.19□□□□□ -0.14
CLN6-222ENST00000637667 LINC01587Q99440 93 aa14.19□□□□□ -0.14
CLN6-222ENST00000637667 ZNF331Q9NQX6 463 aaPredicted RBP14.19□□□□□ -0.14
CLN6-222ENST00000637667 LSM5Q9Y4Y9 91 aaKnown RBP14.19□□□□□ -0.14
CLN6-222ENST00000637667 TRAV6A0A075B6T7 132 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 A0A1B0GVY2 172 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 PLAC8L1A1L4L8 177 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 DEFB130BP0DP73 79 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 DEFB130AP0DP74 79 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 AZU1P20160 251 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 BCAP31P51572 246 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 BPIFA4PQ86YQ2 179 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 ZNF431Q8TF32 576 aaPredicted RBP14.18□□□□□ -0.14
CLN6-222ENST00000637667 TMEM37Q8WXS4 190 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 SEC22CQ9BRL7 303 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 SLC50A1Q9BRV3 221 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 KIAA1109Q2LD37 5005 aa14.18□□□□□ -0.14
CLN6-222ENST00000637667 C5orf51A6NDU8 294 aa14.17□□□□□ -0.14
CLN6-222ENST00000637667 PRSS29PA6NIE9 313 aa14.17□□□□□ -0.14
CLN6-222ENST00000637667 SNRPCP09234 159 aaKnown RBP14.17□□□□□ -0.14
CLN6-222ENST00000637667 TAS2R60P59551 318 aa14.17□□□□□ -0.14
CLN6-222ENST00000637667 Q6ZR54 194 aa14.17□□□□□ -0.14
CLN6-222ENST00000637667 C15orf53Q8NAA6 179 aa14.17□□□□□ -0.14
CLN6-222ENST00000637667 NUDT15Q9NV35 164 aa14.17□□□□□ -0.14
CLN6-222ENST00000637667 CST7O76096 145 aa14.16□□□□□ -0.14
CLN6-222ENST00000637667 CDKN1BP46527 198 aa14.16□□□□□ -0.14
CLN6-222ENST00000637667 CAMLGP49069 296 aa14.16□□□□□ -0.14
CLN6-222ENST00000637667 CAV2P51636 162 aa14.16□□□□□ -0.14
CLN6-222ENST00000637667 RAB31Q13636 194 aa14.16□□□□□ -0.14
CLN6-222ENST00000637667 OPCMLQ14982 345 aa14.16□□□□□ -0.14
CLN6-222ENST00000637667 MORN5Q5VZ52 161 aa14.16□□□□□ -0.14
CLN6-222ENST00000637667 C10orf113Q5VZT2 155 aa14.16□□□□□ -0.14
CLN6-222ENST00000637667 C11orf1Q9H5F2 150 aa14.16□□□□□ -0.14
CLN6-222ENST00000637667 NDUFA13Q9P0J0 144 aa14.16□□□□□ -0.14
CLN6-222ENST00000637667 H3BTX0 84 aa14.15□□□□□ -0.14
CLN6-222ENST00000637667 FCN2Q15485 313 aa14.15□□□□□ -0.14
CLN6-222ENST00000637667 C12orf45Q8N5I9 185 aaPredicted RBP14.15□□□□□ -0.14
CLN6-222ENST00000637667 C2orf50Q96LR7 162 aa14.15□□□□□ -0.14
CLN6-222ENST00000637667 DNAJC4Q9NNZ3 241 aa14.15□□□□□ -0.14
CLN6-222ENST00000637667 PKHD1P08F94 4074 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 FAM24AA6NFZ4 105 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 SLC17A3O00476 420 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 IGLC2P0DOY2 106 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 HTN1P15515 57 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 MIC13Q5XKP0 118 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 Q6ZRG5 221 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 NRARPQ7Z6K4 114 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 C16orf74Q96GX8 76 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 UQCC1Q9NVA1 299 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 WDR83OSQ9Y284 106 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 PXMP4Q9Y6I8 212 aa14.14□□□□□ -0.15
CLN6-222ENST00000637667 PRAC2D3DTV9 90 aa14.13□□□□□ -0.15
CLN6-222ENST00000637667 F5H768 121 aa14.13□□□□□ -0.15
CLN6-222ENST00000637667 PVALBP20472 110 aaPredicted RBP14.13□□□□□ -0.15
CLN6-222ENST00000637667 OR10J6PQ8NGY7 276 aa14.13□□□□□ -0.15
CLN6-222ENST00000637667 CCDC32Q9BV29 185 aa14.13□□□□□ -0.15
CLN6-222ENST00000637667 DNAH11Q96DT5 4516 aa14.13□□□□□ -0.15
CLN6-222ENST00000637667 PCLOQ9Y6V0 5065 aa14.13□□□□□ -0.15
CLN6-222ENST00000637667 CBY3A6NI87 242 aa14.12□□□□□ -0.15
CLN6-222ENST00000637667 H3BQ15 152 aa14.12□□□□□ -0.15
CLN6-222ENST00000637667 H7BYZ3 331 aa14.12□□□□□ -0.15
CLN6-222ENST00000637667 ATP5G1P05496 136 aa14.12□□□□□ -0.15
CLN6-222ENST00000637667 H2AFB2P0C5Z0 115 aa14.12□□□□□ -0.15
CLN6-222ENST00000637667 ATP5G3P48201 142 aa14.12□□□□□ -0.15
CLN6-222ENST00000637667 FAM3BP58499 235 aaPredicted RBP14.12□□□□□ -0.15
CLN6-222ENST00000637667 S100A10P60903 97 aa14.12□□□□□ -0.15
CLN6-222ENST00000637667 ZNF493Q6ZR52 646 aa14.12□□□□□ -0.15
CLN6-222ENST00000637667 OR1L4Q8NGR5 311 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms