RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 FAM78BQ5VT40 261 aa13.92□□□□□ -0.18
PNKP-224ENST00000631020 MIR17HGQ75NE6 70 aa13.92□□□□□ -0.18
PNKP-224ENST00000631020 S100A7AQ86SG5 101 aa13.92□□□□□ -0.18
PNKP-224ENST00000631020 SPAG8Q99932 426 aaPredicted RBP13.92□□□□□ -0.18
PNKP-224ENST00000631020 PLA2G2EQ9NZK7 142 aa13.92□□□□□ -0.18
PNKP-224ENST00000631020 MRPS12O15235 138 aaKnown RBP13.91□□□□□ -0.18
PNKP-224ENST00000631020 TFPI2P48307 235 aa13.91□□□□□ -0.18
PNKP-224ENST00000631020 ACOT6Q3I5F7 207 aaPredicted RBP13.91□□□□□ -0.18
PNKP-224ENST00000631020 ASCL2Q99929 193 aa13.91□□□□□ -0.18
PNKP-224ENST00000631020 FRMD6-AS1P0C7T7 363 aa13.9□□□□□ -0.18
PNKP-224ENST00000631020 WFDC3Q8IUB2 231 aa13.9□□□□□ -0.18
PNKP-224ENST00000631020 Q8N1Y9 231 aa13.9□□□□□ -0.18
PNKP-224ENST00000631020 RPP25LQ8N5L8 163 aaKnown RBP13.9□□□□□ -0.18
PNKP-224ENST00000631020 STXBP6Q8NFX7 210 aa13.9□□□□□ -0.18
PNKP-224ENST00000631020 DCANP1Q8TF63 244 aa13.9□□□□□ -0.18
PNKP-224ENST00000631020 FAM167A-AS1Q96KT0 104 aa13.9□□□□□ -0.18
PNKP-224ENST00000631020 EIF3GO75821 320 aaKnown RBP eCLIP13.9□□□□□ -0.19
PNKP-224ENST00000631020 PEA15Q15121 130 aa13.9□□□□□ -0.19
PNKP-224ENST00000631020 SBSPONQ8IVN8 264 aa13.9□□□□□ -0.19
PNKP-224ENST00000631020 OR10G4Q8NGN3 311 aa13.9□□□□□ -0.19
PNKP-224ENST00000631020 OR10G9Q8NGN4 311 aa13.9□□□□□ -0.19
PNKP-224ENST00000631020 OR10G7Q8NGN6 311 aa13.9□□□□□ -0.19
PNKP-224ENST00000631020 GPR82Q96P67 336 aa13.9□□□□□ -0.19
PNKP-224ENST00000631020 RPRMQ9NS64 109 aa13.9□□□□□ -0.19
PNKP-224ENST00000631020 FUT9Q9Y231 359 aa13.9□□□□□ -0.19
PNKP-224ENST00000631020 UMAD1C9J7I0 102 aa13.89□□□□□ -0.19
PNKP-224ENST00000631020 CD7P09564 240 aa13.89□□□□□ -0.19
PNKP-224ENST00000631020 RPL7P18124 248 aaKnown RBP13.89□□□□□ -0.19
PNKP-224ENST00000631020 CLRN3Q8NCR9 226 aa13.89□□□□□ -0.19
PNKP-224ENST00000631020 LYPD6BQ8NI32 183 aa13.89□□□□□ -0.19
PNKP-224ENST00000631020 SLC25A2Q9BXI2 301 aa13.89□□□□□ -0.19
PNKP-224ENST00000631020 MRPL32Q9BYC8 188 aaKnown RBP13.89□□□□□ -0.19
PNKP-224ENST00000631020 NRN1Q9NPD7 142 aa13.89□□□□□ -0.19
PNKP-224ENST00000631020 K7EQG2 157 aa13.88□□□□□ -0.19
PNKP-224ENST00000631020 DNASE2O00115 360 aaPredicted RBP13.88□□□□□ -0.19
PNKP-224ENST00000631020 SNRPCP09234 159 aaKnown RBP13.88□□□□□ -0.19
PNKP-224ENST00000631020 GALR1P47211 349 aa13.88□□□□□ -0.19
PNKP-224ENST00000631020 RHOBP62745 196 aa13.88□□□□□ -0.19
PNKP-224ENST00000631020 PAFAH1B2P68402 229 aa13.88□□□□□ -0.19
PNKP-224ENST00000631020 FAM122CQ6P4D5 195 aa13.88□□□□□ -0.19
PNKP-224ENST00000631020 FAM24BQ8N5W8 94 aa13.88□□□□□ -0.19
PNKP-224ENST00000631020 C19orf73Q9NVV2 129 aa13.88□□□□□ -0.19
PNKP-224ENST00000631020 RNF24Q9Y225 148 aa13.88□□□□□ -0.19
PNKP-224ENST00000631020 NBEAL2Q6ZNJ1 2754 aa13.87□□□□□ -0.19
PNKP-224ENST00000631020 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
PNKP-224ENST00000631020 OR4C46A6NHA9 309 aa13.87□□□□□ -0.19
PNKP-224ENST00000631020 MBP02144 154 aa13.87□□□□□ -0.19
PNKP-224ENST00000631020 IGHV4-30-4P0DP06 118 aa13.87□□□□□ -0.19
PNKP-224ENST00000631020 TMEM41BQ5BJD5 291 aa13.87□□□□□ -0.19
PNKP-224ENST00000631020 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.87□□□□□ -0.19
PNKP-224ENST00000631020 BPIFA4PQ86YQ2 179 aa13.87□□□□□ -0.19
PNKP-224ENST00000631020 KMT2CQ8NEZ4 4911 aaKnown RBP13.87□□□□□ -0.19
PNKP-224ENST00000631020 H3BQ15 152 aa13.86□□□□□ -0.19
PNKP-224ENST00000631020 IGLC2P0DOY2 106 aa13.86□□□□□ -0.19
PNKP-224ENST00000631020 ATRAIDQ6UW56 229 aa13.86□□□□□ -0.19
PNKP-224ENST00000631020 ZNF503Q96F45 646 aa13.86□□□□□ -0.19
PNKP-224ENST00000631020 ZMAT4Q9H898 229 aa13.86□□□□□ -0.19
PNKP-224ENST00000631020 TMEM14CQ9P0S9 112 aa13.86□□□□□ -0.19
PNKP-224ENST00000631020 HUWE1Q7Z6Z7 4374 aaKnown RBP13.86□□□□□ -0.19
PNKP-224ENST00000631020 A0A1W2PPV4 95 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 SOCS3O14543 225 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 SFTA3P0C7M3 94 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 PYYP10082 97 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 CD81P60033 236 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 ZNF726P1Q15940 193 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 SSX7Q7RTT5 188 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 GTSCR1Q86UQ5 136 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 RAB24Q969Q5 203 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 RCHY1Q96PM5 261 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 TM2D3Q9BRN9 247 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 SMDT1Q9H4I9 107 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 A0A087X0K7 114 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 H3BTX0 84 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 HMGB3O15347 200 aaKnown RBP13.85□□□□□ -0.19
PNKP-224ENST00000631020 ADCYAP1P18509 176 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 ODF3L2Q3SX64 289 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 AKR1C8PQ5T2L2 129 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 DPPA3Q6W0C5 159 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 ZNF586Q9NXT0 402 aa13.85□□□□□ -0.19
PNKP-224ENST00000631020 C3orf84H3BNL1 204 aa13.84□□□□□ -0.19
PNKP-224ENST00000631020 CDC34P49427 236 aaPredicted RBP13.84□□□□□ -0.19
PNKP-224ENST00000631020 WFDC10AQ9H1F0 79 aa13.84□□□□□ -0.19
PNKP-224ENST00000631020 OR51M1Q9H341 326 aa13.84□□□□□ -0.19
PNKP-224ENST00000631020 FHITP49789 147 aa13.83□□□□□ -0.2
PNKP-224ENST00000631020 IGFL4Q6B9Z1 124 aa13.83□□□□□ -0.2
PNKP-224ENST00000631020 FXYD5Q96DB9 178 aa13.83□□□□□ -0.2
PNKP-224ENST00000631020 ACTR3CQ9C0K3 210 aaPredicted RBP13.83□□□□□ -0.2
PNKP-224ENST00000631020 MAP6D1Q9H9H5 199 aa13.83□□□□□ -0.2
PNKP-224ENST00000631020 TRAV8-2A0A0B4J237 113 aa13.82□□□□□ -0.2
PNKP-224ENST00000631020 OR7C2O60412 319 aa13.82□□□□□ -0.2
PNKP-224ENST00000631020 OR10J4P0C629 311 aa13.82□□□□□ -0.2
PNKP-224ENST00000631020 ZNF688P0C7X2 276 aa13.82□□□□□ -0.2
PNKP-224ENST00000631020 HIST1H1EP10412 219 aaKnown RBP13.82□□□□□ -0.2
PNKP-224ENST00000631020 SRSF3P84103 164 aaKnown RBP13.82□□□□□ -0.2
PNKP-224ENST00000631020 GUK1Q16774 197 aa13.82□□□□□ -0.2
PNKP-224ENST00000631020 PAXXQ9BUH6 204 aa13.82□□□□□ -0.2
PNKP-224ENST00000631020 DNAH7Q8WXX0 4024 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 FAM74A7A6NL05 159 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 SLC17A3O00476 420 aa13.81□□□□□ -0.2
PNKP-224ENST00000631020 HBE1P02100 147 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms