RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 SPP1P10451 314 aa10.93□□□□□ -0.66
PNKP-221ENST00000627317 TPT1P13693 172 aaKnown RBP10.93□□□□□ -0.66
PNKP-221ENST00000627317 KHDC3LQ587J8 217 aa10.93□□□□□ -0.66
PNKP-221ENST00000627317 LCN15Q6UWW0 184 aa10.93□□□□□ -0.66
PNKP-221ENST00000627317 SBSPONQ8IVN8 264 aa10.93□□□□□ -0.66
PNKP-221ENST00000627317 C9orf62Q8N4C0 152 aa10.93□□□□□ -0.66
PNKP-221ENST00000627317 TMEM14CQ9P0S9 112 aa10.93□□□□□ -0.66
PNKP-221ENST00000627317 NBEAL2Q6ZNJ1 2754 aa10.93□□□□□ -0.66
PNKP-221ENST00000627317 SNRPCP09234 159 aaKnown RBP10.92□□□□□ -0.66
PNKP-221ENST00000627317 IGLC2P0DOY2 106 aa10.92□□□□□ -0.66
PNKP-221ENST00000627317 PYYP10082 97 aa10.92□□□□□ -0.66
PNKP-221ENST00000627317 CDC34P49427 236 aaPredicted RBP10.92□□□□□ -0.66
PNKP-221ENST00000627317 GUK1Q16774 197 aa10.92□□□□□ -0.66
PNKP-221ENST00000627317 APRG1Q8IVJ8 170 aa10.92□□□□□ -0.66
PNKP-221ENST00000627317 STOML3Q8TAV4 291 aa10.92□□□□□ -0.66
PNKP-221ENST00000627317 FAM167A-AS1Q96KT0 104 aa10.92□□□□□ -0.66
PNKP-221ENST00000627317 LINC00052Q96N35 136 aa10.92□□□□□ -0.66
PNKP-221ENST00000627317 ASCL2Q99929 193 aa10.92□□□□□ -0.66
PNKP-221ENST00000627317 PAXXQ9BUH6 204 aa10.92□□□□□ -0.66
PNKP-221ENST00000627317 HRH4Q9H3N8 390 aa10.92□□□□□ -0.66
PNKP-221ENST00000627317 U3KQK5 164 aa10.92□□□□□ -0.66
PNKP-221ENST00000627317 DNAH7Q8WXX0 4024 aa10.91□□□□□ -0.66
PNKP-221ENST00000627317 H3BQ15 152 aa10.91□□□□□ -0.66
PNKP-221ENST00000627317 H3BTX0 84 aa10.91□□□□□ -0.66
PNKP-221ENST00000627317 HIST1H1EP10412 219 aaKnown RBP10.91□□□□□ -0.66
PNKP-221ENST00000627317 NKX2-5P52952 324 aaPredicted RBP10.91□□□□□ -0.66
PNKP-221ENST00000627317 SLC51BQ86UW2 128 aa10.91□□□□□ -0.66
PNKP-221ENST00000627317 BAP18Q8IXM2 172 aa10.91□□□□□ -0.66
PNKP-221ENST00000627317 C17orf77Q96MU5 243 aa10.91□□□□□ -0.66
PNKP-221ENST00000627317 SLC50A1Q9BRV3 221 aa10.91□□□□□ -0.66
PNKP-221ENST00000627317 ACTR3CQ9C0K3 210 aaPredicted RBP10.91□□□□□ -0.66
PNKP-221ENST00000627317 OR51M1Q9H341 326 aa10.91□□□□□ -0.66
PNKP-221ENST00000627317 RPRMQ9NS64 109 aa10.91□□□□□ -0.66
PNKP-221ENST00000627317 EIF3GO75821 320 aaKnown RBP eCLIP10.9□□□□□ -0.66
PNKP-221ENST00000627317 SEC11BP0C7V7 166 aa10.9□□□□□ -0.66
PNKP-221ENST00000627317 UBE2L3P68036 154 aaKnown RBP10.9□□□□□ -0.66
PNKP-221ENST00000627317 ZNF124Q15973 351 aa10.9□□□□□ -0.66
PNKP-221ENST00000627317 RPP25LQ8N5L8 163 aaKnown RBP10.9□□□□□ -0.66
PNKP-221ENST00000627317 BLNKQ8WV28 456 aa10.9□□□□□ -0.66
PNKP-221ENST00000627317 RNF141Q8WVD5 230 aa10.9□□□□□ -0.66
PNKP-221ENST00000627317 RAB24Q969Q5 203 aa10.9□□□□□ -0.66
PNKP-221ENST00000627317 WWC2-AS2Q96NR7 200 aa10.9□□□□□ -0.66
PNKP-221ENST00000627317 ZNF586Q9NXT0 402 aa10.9□□□□□ -0.66
PNKP-221ENST00000627317 SLC17A3O00476 420 aa10.89□□□□□ -0.67
PNKP-221ENST00000627317 HMGB3O15347 200 aaKnown RBP10.89□□□□□ -0.67
PNKP-221ENST00000627317 OR10J4P0C629 311 aa10.89□□□□□ -0.67
PNKP-221ENST00000627317 IGFL4Q6B9Z1 124 aa10.89□□□□□ -0.67
PNKP-221ENST00000627317 EIF5AL1Q6IS14 154 aaKnown RBP10.89□□□□□ -0.67
PNKP-221ENST00000627317 PQLC2Q6ZP29 291 aa10.89□□□□□ -0.67
PNKP-221ENST00000627317 STHQ8IWL8 128 aa10.89□□□□□ -0.67
PNKP-221ENST00000627317 RNF182Q8N6D2 247 aa10.89□□□□□ -0.67
PNKP-221ENST00000627317 TMED6Q8WW62 240 aa10.89□□□□□ -0.67
PNKP-221ENST00000627317 CITED4Q96RK1 184 aa10.89□□□□□ -0.67
PNKP-221ENST00000627317 ZNF331Q9NQX6 463 aaPredicted RBP10.89□□□□□ -0.67
PNKP-221ENST00000627317 TRBV19A0A075B6N1 114 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 TRAV8-2A0A0B4J237 113 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 CTXND1A0A1B0GTU2 59 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 KNCNA6PVL3 124 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 UMAD1C9J7I0 102 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 ZNF253O75346 499 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 NBEAP1P0C6P0 100 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 ARL14EPLP0DKL9 152 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 PDE6HQ13956 83 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 ACTL10Q5JWF8 245 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 ZNF738Q8NE65 137 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 FXYD5Q96DB9 178 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 C20orf173Q96LM9 149 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 TM2D3Q9BRN9 247 aa10.88□□□□□ -0.67
PNKP-221ENST00000627317 LOC102724200A0A096LPH7 203 aaPredicted RBP10.87□□□□□ -0.67
PNKP-221ENST00000627317 RBMY1BA6NDE4 496 aaKnown RBP10.87□□□□□ -0.67
PNKP-221ENST00000627317 RBMY1EA6NEQ0 496 aaKnown RBP10.87□□□□□ -0.67
PNKP-221ENST00000627317 RBMY1DP0C7P1 496 aaKnown RBP10.87□□□□□ -0.67
PNKP-221ENST00000627317 STAG3L2P0CL84 134 aa10.87□□□□□ -0.67
PNKP-221ENST00000627317 STAG3L3P0CL85 134 aa10.87□□□□□ -0.67
PNKP-221ENST00000627317 RPL35AP18077 110 aaKnown RBP10.87□□□□□ -0.67
PNKP-221ENST00000627317 IQCF2Q8IXL9 164 aa10.87□□□□□ -0.67
PNKP-221ENST00000627317 SAT2Q96F10 170 aaPredicted RBP10.87□□□□□ -0.67
PNKP-221ENST00000627317 ZNF503Q96F45 646 aa10.87□□□□□ -0.67
PNKP-221ENST00000627317 CLEC5AQ9NY25 188 aa10.87□□□□□ -0.67
PNKP-221ENST00000627317 CXorf1O96002 111 aa10.86□□□□□ -0.67
PNKP-221ENST00000627317 HLA-DMBP28068 263 aa10.86□□□□□ -0.67
PNKP-221ENST00000627317 PSG9Q00887 426 aa10.86□□□□□ -0.67
PNKP-221ENST00000627317 PSG3Q16557 428 aa10.86□□□□□ -0.67
PNKP-221ENST00000627317 EBLN2Q6P2I7 272 aa10.86□□□□□ -0.67
PNKP-221ENST00000627317 LINC00322Q6ZN03 302 aaPredicted RBP10.86□□□□□ -0.67
PNKP-221ENST00000627317 FOXI2Q6ZQN5 318 aa10.86□□□□□ -0.67
PNKP-221ENST00000627317 FAM213BQ8TBF2 198 aa10.86□□□□□ -0.67
PNKP-221ENST00000627317 PHYHIPLQ96FC7 376 aa10.86□□□□□ -0.67
PNKP-221ENST00000627317 AAMDCQ9H7C9 122 aa10.86□□□□□ -0.67
PNKP-221ENST00000627317 MAP1LC3B2A6NCE7 125 aa10.85□□□□□ -0.67
PNKP-221ENST00000627317 BOLA2-SMG1P6H3BVE0 249 aa10.85□□□□□ -0.67
PNKP-221ENST00000627317 NDUFB4O95168 129 aa10.85□□□□□ -0.67
PNKP-221ENST00000627317 HLA-DRB4P13762 266 aa10.85□□□□□ -0.67
PNKP-221ENST00000627317 GCHFRP30047 84 aa10.85□□□□□ -0.67
PNKP-221ENST00000627317 APOC4P55056 127 aa10.85□□□□□ -0.67
PNKP-221ENST00000627317 DEFB1P60022 68 aa10.85□□□□□ -0.67
PNKP-221ENST00000627317 ZNF726P1Q15940 193 aa10.85□□□□□ -0.67
PNKP-221ENST00000627317 SSX7Q7RTT5 188 aa10.85□□□□□ -0.67
PNKP-221ENST00000627317 RCHY1Q96PM5 261 aa10.85□□□□□ -0.67
PNKP-221ENST00000627317 MAP1LC3BQ9GZQ8 125 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms