RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 IGKV3-20P01619 116 aa16.15■□□□□ 0.18
SF1-220ENST00000626028 H2BFSP57053 126 aa16.15■□□□□ 0.18
SF1-220ENST00000626028 DEFB1P60022 68 aa16.15■□□□□ 0.18
SF1-220ENST00000626028 NANOS2P60321 138 aaKnown RBP16.15■□□□□ 0.18
SF1-220ENST00000626028 FGL1Q08830 312 aa16.15■□□□□ 0.18
SF1-220ENST00000626028 LRRC20Q8TCA0 184 aa16.15■□□□□ 0.18
SF1-220ENST00000626028 F6UB75 175 aa16.14■□□□□ 0.17
SF1-220ENST00000626028 SIX6O95475 246 aa16.14■□□□□ 0.17
SF1-220ENST00000626028 CXCL3P19876 107 aa16.14■□□□□ 0.17
SF1-220ENST00000626028 OPCMLQ14982 345 aa16.14■□□□□ 0.17
SF1-220ENST00000626028 SLC39A9Q9NUM3 307 aa16.14■□□□□ 0.17
SF1-220ENST00000626028 GOLT1BQ9Y3E0 138 aa16.14■□□□□ 0.17
SF1-220ENST00000626028 SSNA1O43805 119 aa16.13■□□□□ 0.17
SF1-220ENST00000626028 B2MP61769 119 aa16.13■□□□□ 0.17
SF1-220ENST00000626028 PSG3Q16557 428 aa16.13■□□□□ 0.17
SF1-220ENST00000626028 GUK1Q16774 197 aa16.13■□□□□ 0.17
SF1-220ENST00000626028 MIC13Q5XKP0 118 aa16.13■□□□□ 0.17
SF1-220ENST00000626028 AMTNQ6UX39 209 aa16.13■□□□□ 0.17
SF1-220ENST00000626028 ZNF738Q8NE65 137 aa16.13■□□□□ 0.17
SF1-220ENST00000626028 SLC35B3Q9H1N7 401 aa16.13■□□□□ 0.17
SF1-220ENST00000626028 RYR2Q92736 4967 aa16.12■□□□□ 0.17
SF1-220ENST00000626028 FGF7P21781 194 aa16.12■□□□□ 0.17
SF1-220ENST00000626028 CNN1P51911 297 aaKnown RBP16.12■□□□□ 0.17
SF1-220ENST00000626028 RNF182Q8N6D2 247 aa16.12■□□□□ 0.17
SF1-220ENST00000626028 OR5C1Q8NGR4 320 aa16.12■□□□□ 0.17
SF1-220ENST00000626028 PPP1R1CQ8WVI7 109 aa16.12■□□□□ 0.17
SF1-220ENST00000626028 LINC00476Q8WZB0 136 aa16.12■□□□□ 0.17
SF1-220ENST00000626028 ZNF331Q9NQX6 463 aaPredicted RBP16.12■□□□□ 0.17
SF1-220ENST00000626028 KCNIP2Q9NS61 270 aa16.12■□□□□ 0.17
SF1-220ENST00000626028 PXMP4Q9Y6I8 212 aa16.12■□□□□ 0.17
SF1-220ENST00000626028 PTTG1O95997 202 aa16.11■□□□□ 0.17
SF1-220ENST00000626028 IGLC2P0DOY2 106 aa16.11■□□□□ 0.17
SF1-220ENST00000626028 NHLH2Q02577 135 aa16.11■□□□□ 0.17
SF1-220ENST00000626028 LRRC37A5PQ49AS3 106 aa16.11■□□□□ 0.17
SF1-220ENST00000626028 IGF2BP2-AS1Q96M15 143 aa16.11■□□□□ 0.17
SF1-220ENST00000626028 NPCDR1Q9BY65 106 aa16.11■□□□□ 0.17
SF1-220ENST00000626028 OR5AC2Q9NZP5 309 aa16.11■□□□□ 0.17
SF1-220ENST00000626028 DNAH1Q9P2D7 4330 aa16.1■□□□□ 0.17
SF1-220ENST00000626028 ALMS1Q8TCU4 4167 aa16.1■□□□□ 0.17
SF1-220ENST00000626028 TEX48A0A1B0GUV7 120 aa16.1■□□□□ 0.17
SF1-220ENST00000626028 H0YIZ8 118 aa16.1■□□□□ 0.17
SF1-220ENST00000626028 OR11H7Q8NGC8 314 aa16.1■□□□□ 0.17
SF1-220ENST00000626028 OR8A1Q8NGG7 326 aa16.1■□□□□ 0.17
SF1-220ENST00000626028 C2CD4CQ8TF44 421 aa16.1■□□□□ 0.17
SF1-220ENST00000626028 RFNGQ9Y644 331 aa16.1■□□□□ 0.17
SF1-220ENST00000626028 ZNF253O75346 499 aa16.09■□□□□ 0.17
SF1-220ENST00000626028 MPC2O95563 127 aa16.09■□□□□ 0.17
SF1-220ENST00000626028 FXYD7P58549 80 aa16.09■□□□□ 0.17
SF1-220ENST00000626028 IGFL4Q6B9Z1 124 aa16.09■□□□□ 0.17
SF1-220ENST00000626028 HLA-DMBP28068 263 aa16.08■□□□□ 0.16
SF1-220ENST00000626028 MORN5Q5VZ52 161 aa16.08■□□□□ 0.16
SF1-220ENST00000626028 RPUSD4Q96CM3 377 aaKnown RBP16.08■□□□□ 0.16
SF1-220ENST00000626028 TMEM14CQ9P0S9 112 aa16.08■□□□□ 0.16
SF1-220ENST00000626028 TRAV10A0A0B4J240 114 aa16.07■□□□□ 0.16
SF1-220ENST00000626028 HBE1P02100 147 aa16.07■□□□□ 0.16
SF1-220ENST00000626028 C1orf158Q8N1D5 194 aa16.07■□□□□ 0.16
SF1-220ENST00000626028 SAT2Q96F10 170 aaPredicted RBP16.07■□□□□ 0.16
SF1-220ENST00000626028 RNF126Q9BV68 326 aa16.07■□□□□ 0.16
SF1-220ENST00000626028 BOLA2-SMG1P6H3BVE0 249 aa16.06■□□□□ 0.16
SF1-220ENST00000626028 INSP01308 110 aa16.06■□□□□ 0.16
SF1-220ENST00000626028 SPART-AS1P0CW21 52 aa16.06■□□□□ 0.16
SF1-220ENST00000626028 IGHV3OR16-12A0A075B7B8 117 aa16.05■□□□□ 0.16
SF1-220ENST00000626028 HIST1H1AQ02539 215 aaPredicted RBP16.05■□□□□ 0.16
SF1-220ENST00000626028 PDE6HQ13956 83 aa16.05■□□□□ 0.16
SF1-220ENST00000626028 LGALS9CQ6DKI2 356 aa16.05■□□□□ 0.16
SF1-220ENST00000626028 TMEM256Q8N2U0 113 aa16.05■□□□□ 0.16
SF1-220ENST00000626028 ATP5SQ99766 215 aa16.05■□□□□ 0.16
SF1-220ENST00000626028 WDR61Q9GZS3 305 aaKnown RBP16.05■□□□□ 0.16
SF1-220ENST00000626028 PLECQ15149 4684 aaKnown RBP16.05■□□□□ 0.16
SF1-220ENST00000626028 C17orf112F2Z3M2 114 aa16.04■□□□□ 0.16
SF1-220ENST00000626028 H3BQ15 152 aa16.04■□□□□ 0.16
SF1-220ENST00000626028 LY6G6CO95867 125 aa16.04■□□□□ 0.16
SF1-220ENST00000626028 CLINT1Q14677 625 aa16.04■□□□□ 0.16
SF1-220ENST00000626028 SPINK13Q1W4C9 94 aa16.04■□□□□ 0.16
SF1-220ENST00000626028 RRN3P1Q2M238 152 aa16.04■□□□□ 0.16
SF1-220ENST00000626028 Q6ZTC4 211 aa16.04■□□□□ 0.16
SF1-220ENST00000626028 THAP6Q8TBB0 222 aa16.04■□□□□ 0.16
SF1-220ENST00000626028 MRPL53Q96EL3 112 aaKnown RBP16.04■□□□□ 0.16
SF1-220ENST00000626028 TMEM208Q9BTX3 173 aa16.04■□□□□ 0.16
SF1-220ENST00000626028 PPP1R14DQ9NXH3 145 aa16.04■□□□□ 0.16
SF1-220ENST00000626028 HSPB11Q9Y547 144 aa16.04■□□□□ 0.16
SF1-220ENST00000626028 CRXO43186 299 aaPredicted RBP16.03■□□□□ 0.16
SF1-220ENST00000626028 HIST1H1EP10412 219 aaKnown RBP16.03■□□□□ 0.16
SF1-220ENST00000626028 RHOBP62745 196 aa16.03■□□□□ 0.16
SF1-220ENST00000626028 C12orf74Q32Q52 190 aa16.03■□□□□ 0.16
SF1-220ENST00000626028 CELA1Q9UNI1 258 aa16.03■□□□□ 0.16
SF1-220ENST00000626028 TRAV5A0A0B4J249 113 aa16.02■□□□□ 0.16
SF1-220ENST00000626028 M0R2Z0 102 aa16.02■□□□□ 0.16
SF1-220ENST00000626028 SLC17A3O00476 420 aa16.02■□□□□ 0.16
SF1-220ENST00000626028 RPL12P30050 165 aaKnown RBP16.02■□□□□ 0.16
SF1-220ENST00000626028 TSPOP30536 169 aa16.02■□□□□ 0.16
SF1-220ENST00000626028 OR10J6PQ8NGY7 276 aa16.02■□□□□ 0.16
SF1-220ENST00000626028 MRPL32Q9BYC8 188 aaKnown RBP16.02■□□□□ 0.16
SF1-220ENST00000626028 PRELID1Q9Y255 219 aa16.02■□□□□ 0.16
SF1-220ENST00000626028 ALG5Q9Y673 324 aa16.02■□□□□ 0.16
SF1-220ENST00000626028 TRBV19A0A075B6N1 114 aa16.01■□□□□ 0.15
SF1-220ENST00000626028 LOC102723971A0A1B0GUV8 181 aa16.01■□□□□ 0.15
SF1-220ENST00000626028 CDKN1BP46527 198 aa16.01■□□□□ 0.15
SF1-220ENST00000626028 OXA1LQ15070 435 aa16.01■□□□□ 0.15
SF1-220ENST00000626028 ASB13Q8WXK3 278 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms