RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 IQCF2Q8IXL9 164 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 TMEM190Q8WZ59 177 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 CITED4Q96RK1 184 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 TMEM231Q9H6L2 316 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 GNG13Q9P2W3 67 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 RABAC1Q9UI14 185 aa9.48□□□□□ -0.89
PNKP-217ENST00000625216 NBEAL2Q6ZNJ1 2754 aa9.47□□□□□ -0.89
PNKP-217ENST00000625216 LOC102723971A0A1B0GUV8 181 aa9.47□□□□□ -0.89
PNKP-217ENST00000625216 ZNF207O43670 478 aaKnown RBP9.47□□□□□ -0.89
PNKP-217ENST00000625216 ATP6V1G1O75348 118 aa9.47□□□□□ -0.89
PNKP-217ENST00000625216 OR10J4P0C629 311 aa9.47□□□□□ -0.89
PNKP-217ENST00000625216 GUK1Q16774 197 aa9.47□□□□□ -0.89
PNKP-217ENST00000625216 TM4SF20Q53R12 229 aa9.47□□□□□ -0.89
PNKP-217ENST00000625216 LINC00322Q6ZN03 302 aaPredicted RBP9.47□□□□□ -0.89
PNKP-217ENST00000625216 PQLC2Q6ZP29 291 aa9.47□□□□□ -0.89
PNKP-217ENST00000625216 EIF4E3Q8N5X7 224 aaKnown RBP9.47□□□□□ -0.89
PNKP-217ENST00000625216 MUC7Q8TAX7 377 aa9.47□□□□□ -0.89
PNKP-217ENST00000625216 C20orf24Q9BUV8 137 aa9.47□□□□□ -0.89
PNKP-217ENST00000625216 MLXQ9UH92 298 aa9.47□□□□□ -0.89
PNKP-217ENST00000625216 ZNF98A6NK75 572 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 OR11H12B2RN74 326 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 C9JQL5 133 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 K7EMT4 169 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 MRPS12O15235 138 aaKnown RBP9.46□□□□□ -0.9
PNKP-217ENST00000625216 CD7P09564 240 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 BCL2P10415 239 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 EDN2P20800 178 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 PSMB3P49720 205 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 UBE2L3P68036 154 aaKnown RBP9.46□□□□□ -0.9
PNKP-217ENST00000625216 ICAM4Q14773 271 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 ZNF506Q5JVG8 444 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 RBPMS2Q6ZRY4 209 aaKnown RBP9.46□□□□□ -0.9
PNKP-217ENST00000625216 TMEM61Q8N0U2 210 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 RARRES2Q99969 163 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 PAXXQ9BUH6 204 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 OR51M1Q9H341 326 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 DAZ1Q9NQZ3 744 aaKnown RBP9.46□□□□□ -0.9
PNKP-217ENST00000625216 U3KQE9 123 aa9.46□□□□□ -0.9
PNKP-217ENST00000625216 IGHV3-49A0A0A0MS15 119 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 RBFOX3A6NFN3 312 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 PAGE4O60829 102 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 APOHP02749 345 aaPredicted RBP9.45□□□□□ -0.9
PNKP-217ENST00000625216 CRYBB3P26998 211 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 UBE2G2P60604 165 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 PMS2P11Q13670 270 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 DEFB125Q8N687 156 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 SUN5Q8TC36 379 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 METTL26Q96S19 204 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 MANBALQ9NQG1 85 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 TMEM14CQ9P0S9 112 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 YTHDF2Q9Y5A9 579 aaKnown RBP9.45□□□□□ -0.9
PNKP-217ENST00000625216 RYR3Q15413 4870 aa9.45□□□□□ -0.9
PNKP-217ENST00000625216 IGHV3-66A0A0C4DH42 116 aa9.44□□□□□ -0.9
PNKP-217ENST00000625216 IFNA1P01562 189 aa9.44□□□□□ -0.9
PNKP-217ENST00000625216 CD5P06127 495 aa9.44□□□□□ -0.9
PNKP-217ENST00000625216 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
PNKP-217ENST00000625216 ATP5G3P48201 142 aa9.44□□□□□ -0.9
PNKP-217ENST00000625216 UQCC3Q6UW78 93 aa9.44□□□□□ -0.9
PNKP-217ENST00000625216 RXFP4Q8TDU9 374 aa9.44□□□□□ -0.9
PNKP-217ENST00000625216 TMEM167BQ9NRX6 74 aa9.44□□□□□ -0.9
PNKP-217ENST00000625216 DNAH7Q8WXX0 4024 aa9.44□□□□□ -0.9
PNKP-217ENST00000625216 IGHV3OR16-13A0A075B7E8 117 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 IGHV3-74A0A0B4J1X5 117 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 FAM74A7A6NL05 159 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 H3BTX0 84 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 BUB3O43684 328 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 IGLC2P0DOY2 106 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 NPPCP23582 126 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 PPT1P50897 306 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 S100A7AQ86SG5 101 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 STXBP6Q8NFX7 210 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 SPAG8Q99932 426 aaPredicted RBP9.43□□□□□ -0.9
PNKP-217ENST00000625216 EIF5A2Q9GZV4 153 aaKnown RBP9.43□□□□□ -0.9
PNKP-217ENST00000625216 SRD5A3Q9H8P0 318 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 EDA2RQ9HAV5 297 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 TREM1Q9NP99 234 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 VAX2Q9UIW0 290 aa9.43□□□□□ -0.9
PNKP-217ENST00000625216 RBMY1BA6NDE4 496 aaKnown RBP9.42□□□□□ -0.9
PNKP-217ENST00000625216 RBMY1EA6NEQ0 496 aaKnown RBP9.42□□□□□ -0.9
PNKP-217ENST00000625216 H3BQ15 152 aa9.42□□□□□ -0.9
PNKP-217ENST00000625216 TSPAN4O14817 238 aa9.42□□□□□ -0.9
PNKP-217ENST00000625216 SRP19P09132 144 aaKnown RBP9.42□□□□□ -0.9
PNKP-217ENST00000625216 RBMY1DP0C7P1 496 aaKnown RBP9.42□□□□□ -0.9
PNKP-217ENST00000625216 PEA15Q15121 130 aa9.42□□□□□ -0.9
PNKP-217ENST00000625216 C16orf54Q6UWD8 224 aa9.42□□□□□ -0.9
PNKP-217ENST00000625216 BPIFA4PQ86YQ2 179 aa9.42□□□□□ -0.9
PNKP-217ENST00000625216 GLMPQ8WWB7 406 aa9.42□□□□□ -0.9
PNKP-217ENST00000625216 C17orf77Q96MU5 243 aa9.42□□□□□ -0.9
PNKP-217ENST00000625216 ZNF586Q9NXT0 402 aa9.42□□□□□ -0.9
PNKP-217ENST00000625216 ARL2-SNX15V9GYD0 113 aa9.42□□□□□ -0.9
PNKP-217ENST00000625216 IGHV7-4-1A0A0J9YVY3 117 aa9.41□□□□□ -0.9
PNKP-217ENST00000625216 GGTLC3B5MD39 225 aa9.41□□□□□ -0.9
PNKP-217ENST00000625216 NBEAP1P0C6P0 100 aa9.41□□□□□ -0.9
PNKP-217ENST00000625216 HIST1H1EP10412 219 aaKnown RBP9.41□□□□□ -0.9
PNKP-217ENST00000625216 RPL7P18124 248 aaKnown RBP9.41□□□□□ -0.9
PNKP-217ENST00000625216 ADCYAP1P18509 176 aa9.41□□□□□ -0.9
PNKP-217ENST00000625216 S100A7P31151 101 aa9.41□□□□□ -0.9
PNKP-217ENST00000625216 MEF2BQ02080 365 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms