RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 LINC00477Q96M19 166 aa12.17□□□□□ -0.46
C9orf139-202ENST00000623196 PLSCR4Q9NRQ2 329 aa12.17□□□□□ -0.46
C9orf139-202ENST00000623196 RASL10AQ92737 203 aa12.17□□□□□ -0.46
C9orf139-202ENST00000623196 TRAV40A0A0B4J280 105 aa12.17□□□□□ -0.46
C9orf139-202ENST00000623196 NPC2P61916 151 aa12.17□□□□□ -0.46
C9orf139-202ENST00000623196 RCHY1Q96PM5 261 aa12.17□□□□□ -0.46
C9orf139-202ENST00000623196 C20orf144Q9BQM9 153 aa12.17□□□□□ -0.46
C9orf139-202ENST00000623196 A8MWP6 167 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 Q0VG73 95 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 Q6ZRM9 215 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 AMN1Q8IY45 258 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 LSM4Q9Y4Z0 139 aaKnown RBP12.16□□□□□ -0.46
C9orf139-202ENST00000623196 A0A0G2JRQ6 117 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 TNFRSF6BO95407 300 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 TMEM249Q2WGJ8 235 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 DENND4CQ5VZ89 1909 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 H0YJW9 148 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 ZNF688P0C7X2 276 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 C5orf64Q2M2E5 130 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 LURAP1LQ8IV03 231 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 METRNQ9UJH8 293 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 COX11Q9Y6N1 276 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 FNDC10F2Z333 226 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 IL18BPO95998 194 aa12.16□□□□□ -0.46
C9orf139-202ENST00000623196 C14orf178Q8N769 122 aaPredicted RBP12.16□□□□□ -0.46
C9orf139-202ENST00000623196 WIPF3A6NGB9 483 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 CHAC1Q9BUX1 264 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 CSTL1Q9H114 145 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 EREGO14944 169 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 MINOS1Q5TGZ0 78 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 ZNF474Q6S9Z5 364 aaPredicted RBP12.15□□□□□ -0.46
C9orf139-202ENST00000623196 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 MINOS1-NBL1R4GNA1 71 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 TMEM178BH3BS89 294 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 LILRA1O75019 489 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 Q6P435 159 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 LAMTOR3Q9UHA4 124 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 FRMPD3Q5JV73 1810 aa12.15□□□□□ -0.46
C9orf139-202ENST00000623196 CFPP27918 469 aa12.15□□□□□ -0.47
C9orf139-202ENST00000623196 C1orf147Q96MC9 270 aaPredicted RBP12.15□□□□□ -0.47
C9orf139-202ENST00000623196 MCRIP2Q9BUT9 160 aaKnown RBP12.15□□□□□ -0.47
C9orf139-202ENST00000623196 HS3ST6Q96QI5 342 aa12.14□□□□□ -0.47
C9orf139-202ENST00000623196 SIGLEC9Q9Y336 463 aa12.14□□□□□ -0.47
C9orf139-202ENST00000623196 PLXNB3Q9ULL4 1909 aa12.14□□□□□ -0.47
C9orf139-202ENST00000623196 NTN3O00634 580 aaPredicted RBP12.14□□□□□ -0.47
C9orf139-202ENST00000623196 PFN1P07737 140 aaKnown RBP12.14□□□□□ -0.47
C9orf139-202ENST00000623196 SPINK8P0C7L1 97 aa12.14□□□□□ -0.47
C9orf139-202ENST00000623196 RNASE2P10153 161 aaKnown RBP12.14□□□□□ -0.47
C9orf139-202ENST00000623196 C3orf36Q3SXR2 165 aa12.14□□□□□ -0.47
C9orf139-202ENST00000623196 VMO1Q7Z5L0 202 aa12.14□□□□□ -0.47
C9orf139-202ENST00000623196 ZNF48Q96MX3 618 aaPredicted RBP12.13□□□□□ -0.47
C9orf139-202ENST00000623196 MYMXA0A1B0GTQ4 84 aa12.13□□□□□ -0.47
C9orf139-202ENST00000623196 CMC4P56277 68 aaPredicted RBP12.13□□□□□ -0.47
C9orf139-202ENST00000623196 ADAMTSL5Q6ZMM2 481 aa12.13□□□□□ -0.47
C9orf139-202ENST00000623196 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
C9orf139-202ENST00000623196 C1orf159Q96HA4 380 aa12.13□□□□□ -0.47
C9orf139-202ENST00000623196 GFRA4Q9GZZ7 299 aa12.13□□□□□ -0.47
C9orf139-202ENST00000623196 LINC00479Q96M42 142 aa12.13□□□□□ -0.47
C9orf139-202ENST00000623196 TRAV8-3A0A0A6YYJ7 113 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 IGHV3-73A0A0B4J1V6 119 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 SMKR1H3BMG3 65 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 ZNF415Q09FC8 603 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 C6orf226Q5I0X4 101 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 LY6G5BQ8NDX9 201 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 LIME1Q9H400 295 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 TRBV7-1A0A0A6YYK4 115 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 C9JAW5 83 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 ITGB1BP1O14713 200 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 Q86TA4 180 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 OVOL2Q9BRP0 275 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 POLR3KQ9Y2Y1 108 aaPredicted RBP12.12□□□□□ -0.47
C9orf139-202ENST00000623196 TMEM219Q86XT9 240 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 STPG4Q8N801 248 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 TMEM105Q8N8V8 129 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 LINC00205P59089 165 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 DNAJC30Q96LL9 226 aa12.12□□□□□ -0.47
C9orf139-202ENST00000623196 ZNF329Q86UD4 541 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 CYYR1Q96J86 154 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 VGLL1Q99990 258 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 TIMM21Q9BVV7 248 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 TRGV1A0A0A0MS02 117 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 FCN3O75636 299 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 MLANAQ16655 118 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 ASCL4Q6XD76 172 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 PRIMA1Q86XR5 153 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 C11orf44Q8N8P7 122 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 NDPQ00604 133 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 PDE6HQ13956 83 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 C20orf204Q6ZNR8 217 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 C18orf32Q8TCD1 76 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
C9orf139-202ENST00000623196 FAM231BA6NCW3 169 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 ARMS2P0C7Q2 107 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 Q0VFX4 171 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 C1orf122Q6ZSJ8 110 aa12.11□□□□□ -0.47
C9orf139-202ENST00000623196 CSRP1P21291 193 aaKnown RBP12.1□□□□□ -0.47
C9orf139-202ENST00000623196 LEPROTO15243 131 aa12.1□□□□□ -0.47
C9orf139-202ENST00000623196 EDA2RQ9HAV5 297 aa12.1□□□□□ -0.47
C9orf139-202ENST00000623196 KLRD1Q13241 179 aa12.1□□□□□ -0.47
C9orf139-202ENST00000623196 DTX1Q86Y01 620 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms