RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 RARRES2Q99969 163 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 MEGF9Q9H1U4 602 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 OTORQ9NRC9 128 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 IGHV7-4-1A0A0J9YVY3 117 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 CXCL2P19875 107 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 S100A12P80511 92 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 TTC9CQ8N5M4 171 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 Q8TAT8 98 aa7.14□□□□□ -1.27
HDAC9-229ENST00000622668 TRGV11A0A075B6L2 103 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.13□□□□□ -1.27
HDAC9-229ENST00000622668 FABP4P15090 132 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 CBLN1P23435 193 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 C19orf54Q5BKX5 351 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 OR4C5Q8NGB2 326 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 TMEM37Q8WXS4 190 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 GCN1Q92616 2671 aaKnown RBP7.13□□□□□ -1.27
HDAC9-229ENST00000622668 LINC01548A6NM66 108 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 H7C1H1 209 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 CKS2P33552 79 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 CDX1P47902 265 aaPredicted RBP7.13□□□□□ -1.27
HDAC9-229ENST00000622668 SULT1A2P50226 295 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 Q6ZN92 141 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 APRG1Q8IVJ8 170 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 SMPXQ9UHP9 88 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 YPEL3P61236 119 aaPredicted RBP7.13□□□□□ -1.27
HDAC9-229ENST00000622668 CENPWQ5EE01 88 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 ZNF586Q9NXT0 402 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 IGHV3-73A0A0B4J1V6 119 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 LOC389332A0A1B0GUA5 103 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 RNF182Q8N6D2 247 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 NPBQ8NG41 125 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 CYYR1Q96J86 154 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 PSG8Q9UQ74 426 aa7.13□□□□□ -1.27
HDAC9-229ENST00000622668 PRSS1P07477 247 aa7.12□□□□□ -1.27
HDAC9-229ENST00000622668 PSG3Q16557 428 aa7.12□□□□□ -1.27
HDAC9-229ENST00000622668 SPAG8Q99932 426 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-229ENST00000622668 IGLC7A0M8Q6 106 aa7.12□□□□□ -1.27
HDAC9-229ENST00000622668 ISLRO14498 428 aa7.12□□□□□ -1.27
HDAC9-229ENST00000622668 AMTP48728 403 aa7.12□□□□□ -1.27
HDAC9-229ENST00000622668 Q6ZSR3 168 aa7.12□□□□□ -1.27
HDAC9-229ENST00000622668 DLX4Q92988 240 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-229ENST00000622668 LOC102724200A0A096LPH7 203 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-229ENST00000622668 PMCHP20382 165 aa7.12□□□□□ -1.27
HDAC9-229ENST00000622668 TMEM14EPQ6UXP3 125 aa7.12□□□□□ -1.27
HDAC9-229ENST00000622668 VGLL1Q99990 258 aa7.12□□□□□ -1.27
HDAC9-229ENST00000622668 CHCHD5Q9BSY4 110 aa7.12□□□□□ -1.27
HDAC9-229ENST00000622668 TRAPPC1Q9Y5R8 145 aa7.12□□□□□ -1.27
HDAC9-229ENST00000622668 H0YIZ8 118 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 IGKV1-39P01597 117 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 IGKV1D-39P04432 117 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 ATP5G3P48201 142 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 INSL3P51460 131 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 ZNF138P52744 262 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 CD300EQ496F6 205 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-229ENST00000622668 LY6G6FQ5SQ64 297 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 SPATA31B1PQ5VZV4 182 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 C10orf99Q6UWK7 81 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 SEPSECSQ9HD40 501 aaKnown RBP7.11□□□□□ -1.27
HDAC9-229ENST00000622668 TRAV12-2A0A075B6T6 113 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 FSTL3O95633 263 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 BTCP35070 178 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 SRSF1Q07955 248 aaKnown RBP eCLIP7.11□□□□□ -1.27
HDAC9-229ENST00000622668 OXLD1Q5BKU9 147 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 CHAC2Q8WUX2 184 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 MGST2Q99735 147 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 ZNF256Q9Y2P7 627 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-229ENST00000622668 RFNGQ9Y644 331 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 MAP1AP78559 2803 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-229ENST00000622668 DEFB135Q30KP9 77 aa7.11□□□□□ -1.27
HDAC9-229ENST00000622668 ODF3BA8MYP8 253 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 M0R2Z0 102 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 CRPP02741 224 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 PNRC1Q12796 327 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-229ENST00000622668 OR10J3Q5JRS4 329 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 C9orf62Q8N4C0 152 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 RPP25LQ8N5L8 163 aaKnown RBP7.1□□□□□ -1.27
HDAC9-229ENST00000622668 EPDR1Q9UM22 224 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 AKAP13Q12802 2813 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 GAGE12BA1L429 117 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 GAGE7O76087 117 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 GAGE12FP0CL80 117 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 GAGE12GP0CL81 117 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 GAGE12IP0CL82 117 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 RPL35P42766 123 aaKnown RBP7.1□□□□□ -1.27
HDAC9-229ENST00000622668 FAM162BQ5T6X4 162 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 PUSL1Q8N0Z8 303 aaKnown RBP7.1□□□□□ -1.27
HDAC9-229ENST00000622668 KIR2DL4Q99706 377 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 PRADC1Q9BSG0 188 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 A0A087X0M5 115 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 A0A1B0GX30 115 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 SCO2A0A1W2PP80 73 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 H3BVH4 76 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 POU2AF1Q16633 256 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 FAM74A3Q4VXF1 159 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 UTF1Q5T230 341 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 WIPF2Q8TF74 440 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-229ENST00000622668 C4orf3Q8WVX3 66 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 TMEM18Q96B42 140 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 LINC00477Q96M19 166 aa7.1□□□□□ -1.27
HDAC9-229ENST00000622668 PACRGQ96M98 296 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms