RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SONP18583 2426 aaKnown RBP16.49■□□□□ 0.23
SPAST-204ENST00000621856 S100A9P06702 114 aaKnown RBP16.48■□□□□ 0.23
SPAST-204ENST00000621856 OR5I1Q13606 314 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 UNQ9165/PRO28630Q6UXU0 137 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 BAGE2Q86Y30 109 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 OR10G8Q8NGN5 311 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 SERTAD4Q9NUC0 356 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 U3KQE9 123 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 ZNF320A2RRD8 509 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 FAM181BA6NEQ2 426 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 RAB5AP20339 215 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 S100PP25815 95 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 FMC1Q96HJ9 113 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 SGK494Q96LW2 274 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 SMR3AQ99954 134 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 TMEM160Q9NX00 188 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 KLF12Q9Y4X4 402 aa16.48■□□□□ 0.23
SPAST-204ENST00000621856 IGLV2-8P01709 118 aa16.47■□□□□ 0.23
SPAST-204ENST00000621856 GOLT1AQ6ZVE7 132 aa16.47■□□□□ 0.23
SPAST-204ENST00000621856 NHLRC2Q8NBF2 726 aa16.47■□□□□ 0.23
SPAST-204ENST00000621856 ACANP16112 2415 aa16.47■□□□□ 0.23
SPAST-204ENST00000621856 AKAP9Q99996 3911 aa16.46■□□□□ 0.23
SPAST-204ENST00000621856 TGIF2-C20orf24A0A0A6YYL0 155 aa16.46■□□□□ 0.23
SPAST-204ENST00000621856 CRYBA1P05813 215 aa16.46■□□□□ 0.23
SPAST-204ENST00000621856 ESM1Q9NQ30 184 aa16.46■□□□□ 0.23
SPAST-204ENST00000621856 MYO9AB2RTY4 2548 aa16.46■□□□□ 0.22
SPAST-204ENST00000621856 A0A087X0K7 114 aa16.45■□□□□ 0.22
SPAST-204ENST00000621856 GCGP01275 180 aa16.45■□□□□ 0.22
SPAST-204ENST00000621856 CXCL1P09341 107 aa16.45■□□□□ 0.22
SPAST-204ENST00000621856 ERVFC1-1P60608 527 aa16.45■□□□□ 0.22
SPAST-204ENST00000621856 K7EQM0 130 aa16.45■□□□□ 0.22
SPAST-204ENST00000621856 ZNF253O75346 499 aa16.45■□□□□ 0.22
SPAST-204ENST00000621856 SRD5A1P18405 259 aa16.45■□□□□ 0.22
SPAST-204ENST00000621856 CSN1S1P47710 185 aa16.45■□□□□ 0.22
SPAST-204ENST00000621856 M0R3E3 92 aa16.44■□□□□ 0.22
SPAST-204ENST00000621856 LY6G6DO95868 133 aa16.44■□□□□ 0.22
SPAST-204ENST00000621856 FAM106AQ4KMX7 169 aa16.44■□□□□ 0.22
SPAST-204ENST00000621856 KCNIP4Q6PIL6 250 aa16.44■□□□□ 0.22
SPAST-204ENST00000621856 C16orf54Q6UWD8 224 aa16.44■□□□□ 0.22
SPAST-204ENST00000621856 Q6ZSV7 163 aa16.44■□□□□ 0.22
SPAST-204ENST00000621856 MYOZ3Q8TDC0 251 aa16.44■□□□□ 0.22
SPAST-204ENST00000621856 PFN1P07737 140 aaKnown RBP16.43■□□□□ 0.22
SPAST-204ENST00000621856 LGALS1P09382 135 aaKnown RBP16.43■□□□□ 0.22
SPAST-204ENST00000621856 FOLR2P14207 255 aa16.43■□□□□ 0.22
SPAST-204ENST00000621856 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.43■□□□□ 0.22
SPAST-204ENST00000621856 RNF152Q8N8N0 203 aa16.43■□□□□ 0.22
SPAST-204ENST00000621856 GRAMD2BQ96HH9 432 aa16.43■□□□□ 0.22
SPAST-204ENST00000621856 MLXQ9UH92 298 aa16.43■□□□□ 0.22
SPAST-204ENST00000621856 DIRC3C9JPN6 131 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 RPEL1Q2QD12 228 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 KLHDC1Q8N7A1 406 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 ZNF418Q8TF45 676 aaPredicted RBP16.42■□□□□ 0.22
SPAST-204ENST00000621856 UBE2E2Q96LR5 201 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 ZNF331Q9NQX6 463 aaPredicted RBP16.42■□□□□ 0.22
SPAST-204ENST00000621856 TRAV8-1A0A0A6YYK1 113 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 A0A1W2PS18 150 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 PRNTQ86SH4 94 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 Q86TA4 180 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 GLMPQ8WWB7 406 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 SMIM12Q96EX1 92 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 FAM210BQ96KR6 192 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 RNASE7Q9H1E1 156 aaKnown RBP16.42■□□□□ 0.22
SPAST-204ENST00000621856 OSTCQ9NRP0 149 aa16.42■□□□□ 0.22
SPAST-204ENST00000621856 LTAP01374 205 aa16.41■□□□□ 0.22
SPAST-204ENST00000621856 PRB4P10163 310 aaPredicted RBP16.41■□□□□ 0.22
SPAST-204ENST00000621856 RPS10P46783 165 aaKnown RBP16.41■□□□□ 0.22
SPAST-204ENST00000621856 IGFL4Q6B9Z1 124 aa16.41■□□□□ 0.22
SPAST-204ENST00000621856 GPHB5Q86YW7 130 aa16.41■□□□□ 0.22
SPAST-204ENST00000621856 TMEM75Q8N9X5 138 aa16.41■□□□□ 0.22
SPAST-204ENST00000621856 SLC50A1Q9BRV3 221 aa16.41■□□□□ 0.22
SPAST-204ENST00000621856 TRBV24-1A0A075B6N3 115 aa16.4■□□□□ 0.22
SPAST-204ENST00000621856 MEOX2P50222 304 aa16.4■□□□□ 0.22
SPAST-204ENST00000621856 TM4SF20Q53R12 229 aa16.4■□□□□ 0.22
SPAST-204ENST00000621856 IBA57Q5T440 356 aaKnown RBP16.4■□□□□ 0.22
SPAST-204ENST00000621856 PRR27Q6MZM9 219 aa16.4■□□□□ 0.22
SPAST-204ENST00000621856 IMMP2LQ96T52 175 aa16.4■□□□□ 0.22
SPAST-204ENST00000621856 DAZ1Q9NQZ3 744 aaKnown RBP16.4■□□□□ 0.22
SPAST-204ENST00000621856 A0A1W2PPQ1 181 aa16.39■□□□□ 0.21
SPAST-204ENST00000621856 C1orf196B1AJZ1 125 aa16.39■□□□□ 0.21
SPAST-204ENST00000621856 HLA-DMBP28068 263 aa16.39■□□□□ 0.21
SPAST-204ENST00000621856 IGHV7-4-1A0A0J9YVY3 117 aa16.39■□□□□ 0.21
SPAST-204ENST00000621856 TRBV6-1A0A0K0K1D8 114 aa16.39■□□□□ 0.21
SPAST-204ENST00000621856 SERTM2A0A1B0GWG4 89 aa16.39■□□□□ 0.21
SPAST-204ENST00000621856 IGLV2-11P01706 119 aa16.39■□□□□ 0.21
SPAST-204ENST00000621856 RNASE1P07998 156 aaKnown RBP16.39■□□□□ 0.21
SPAST-204ENST00000621856 FLI1Q01543 452 aaPredicted RBP16.39■□□□□ 0.21
SPAST-204ENST00000621856 PSG3Q16557 428 aa16.39■□□□□ 0.21
SPAST-204ENST00000621856 ARL6IP6Q8N6S5 226 aa16.39■□□□□ 0.21
SPAST-204ENST00000621856 UFC1Q9Y3C8 167 aa16.39■□□□□ 0.21
SPAST-204ENST00000621856 V9GYV3 84 aa16.39■□□□□ 0.21
SPAST-204ENST00000621856 K7EMT4 169 aa16.38■□□□□ 0.21
SPAST-204ENST00000621856 FAM3BP58499 235 aaPredicted RBP16.38■□□□□ 0.21
SPAST-204ENST00000621856 IL36BQ9NZH7 164 aa16.38■□□□□ 0.21
SPAST-204ENST00000621856 PSG8Q9UQ74 426 aa16.38■□□□□ 0.21
SPAST-204ENST00000621856 IGHV4OR15-8A0A075B7B6 117 aa16.37■□□□□ 0.21
SPAST-204ENST00000621856 A0A087WW49 117 aa16.37■□□□□ 0.21
SPAST-204ENST00000621856 CHEK1O14757 476 aa16.37■□□□□ 0.21
SPAST-204ENST00000621856 RAB5BP61020 215 aa16.37■□□□□ 0.21
SPAST-204ENST00000621856 C8orf86Q6ZUL3 223 aa16.37■□□□□ 0.21
SPAST-204ENST00000621856 C1QL4Q86Z23 238 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms