RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 EPDR1Q9UM22 224 aa16.7■□□□□ 0.26
SGMS1-210ENST00000619438 KLF12Q9Y4X4 402 aa16.7■□□□□ 0.26
SGMS1-210ENST00000619438 OR5I1Q13606 314 aa16.69■□□□□ 0.26
SGMS1-210ENST00000619438 FANCD2OSQ96PS1 177 aa16.69■□□□□ 0.26
SGMS1-210ENST00000619438 SLC17A3O00476 420 aa16.69■□□□□ 0.26
SGMS1-210ENST00000619438 TOMM40O96008 361 aa16.69■□□□□ 0.26
SGMS1-210ENST00000619438 TMEM183BQ1AE95 376 aa16.69■□□□□ 0.26
SGMS1-210ENST00000619438 GFI1BQ5VTD9 330 aa16.69■□□□□ 0.26
SGMS1-210ENST00000619438 SLC25A39Q9BZJ4 359 aaPredicted RBP16.69■□□□□ 0.26
SGMS1-210ENST00000619438 GPR61Q9BZJ8 451 aa16.69■□□□□ 0.26
SGMS1-210ENST00000619438 CD28P10747 220 aa16.68■□□□□ 0.26
SGMS1-210ENST00000619438 LYZP61626 148 aa16.68■□□□□ 0.26
SGMS1-210ENST00000619438 FAM231DQ6ZW35 169 aa16.68■□□□□ 0.26
SGMS1-210ENST00000619438 FAM103A1Q9BTL3 118 aaKnown RBP16.68■□□□□ 0.26
SGMS1-210ENST00000619438 TRAPPC1Q9Y5R8 145 aa16.68■□□□□ 0.26
SGMS1-210ENST00000619438 HLA-DRB1P01911 266 aa16.67■□□□□ 0.26
SGMS1-210ENST00000619438 RANP62826 216 aaKnown RBP16.67■□□□□ 0.26
SGMS1-210ENST00000619438 RPL19P84098 196 aaKnown RBP16.67■□□□□ 0.26
SGMS1-210ENST00000619438 NDPQ00604 133 aa16.67■□□□□ 0.26
SGMS1-210ENST00000619438 KLK9Q2XQG4 91 aa16.67■□□□□ 0.26
SGMS1-210ENST00000619438 Q8N9W7 124 aa16.67■□□□□ 0.26
SGMS1-210ENST00000619438 C5orf17Q8NAS9 161 aa16.67■□□□□ 0.26
SGMS1-210ENST00000619438 TMEM68Q96MH6 324 aa16.67■□□□□ 0.26
SGMS1-210ENST00000619438 KLK9Q9UKQ9 250 aa16.67■□□□□ 0.26
SGMS1-210ENST00000619438 RNF24Q9Y225 148 aa16.67■□□□□ 0.26
SGMS1-210ENST00000619438 MEGF8Q7Z7M0 2845 aa16.67■□□□□ 0.26
SGMS1-210ENST00000619438 XKRY2A2RUG3 117 aa16.66■□□□□ 0.26
SGMS1-210ENST00000619438 HIST1H1EP10412 219 aaKnown RBP16.66■□□□□ 0.26
SGMS1-210ENST00000619438 HIST1H1BP16401 226 aaKnown RBP16.66■□□□□ 0.26
SGMS1-210ENST00000619438 MFAP4P55083 255 aa16.66■□□□□ 0.26
SGMS1-210ENST00000619438 ZNF600Q6ZNG1 722 aa16.66■□□□□ 0.26
SGMS1-210ENST00000619438 SHANK2-AS3Q9BTD1 123 aa16.66■□□□□ 0.26
SGMS1-210ENST00000619438 TRBV9A0A0B4J1U6 114 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 WI2-2373I1.2A0A1W2PRP0 233 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 PGPA6NDG6 321 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 SLC25A5P05141 298 aaKnown RBP16.65■□□□□ 0.26
SGMS1-210ENST00000619438 NSUN5P1Q3KNT7 163 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 IBA57Q5T440 356 aaKnown RBP16.65■□□□□ 0.26
SGMS1-210ENST00000619438 S100A7AQ86SG5 101 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 FAM110DQ8TAY7 271 aaPredicted RBP16.65■□□□□ 0.26
SGMS1-210ENST00000619438 ATG101Q9BSB4 218 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 THYN1Q9P016 225 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 IGHV7-81A0A0B4J1V7 117 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 H3BRN7 92 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 EGR2P11161 476 aaPredicted RBP16.65■□□□□ 0.26
SGMS1-210ENST00000619438 COX19Q49B96 90 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 DNLZQ5SXM8 178 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 BAGE2Q86Y30 109 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 ZNF491Q8N8L2 437 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 LINC00479Q96M42 142 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 CITED2Q99967 270 aaPredicted RBP16.65■□□□□ 0.26
SGMS1-210ENST00000619438 RNASE7Q9H1E1 156 aaKnown RBP16.65■□□□□ 0.26
SGMS1-210ENST00000619438 OTORQ9NRC9 128 aa16.65■□□□□ 0.26
SGMS1-210ENST00000619438 SMIM27A0A1W2PRY6 76 aa16.64■□□□□ 0.25
SGMS1-210ENST00000619438 PCP4L1A6NKN8 68 aa16.64■□□□□ 0.25
SGMS1-210ENST00000619438 OR4X2Q8NGF9 303 aa16.64■□□□□ 0.25
SGMS1-210ENST00000619438 BLNKQ8WV28 456 aa16.64■□□□□ 0.25
SGMS1-210ENST00000619438 HIST1H2BLQ99880 126 aa16.64■□□□□ 0.25
SGMS1-210ENST00000619438 NIT2Q9NQR4 276 aa16.64■□□□□ 0.25
SGMS1-210ENST00000619438 LINC00527Q9UJ94 153 aa16.64■□□□□ 0.25
SGMS1-210ENST00000619438 IGHG2P01859 326 aa16.63■□□□□ 0.25
SGMS1-210ENST00000619438 MGST1P10620 155 aaKnown RBP16.63■□□□□ 0.25
SGMS1-210ENST00000619438 FCGR2BP31994 310 aaPredicted RBP16.63■□□□□ 0.25
SGMS1-210ENST00000619438 OR10D4PQ8NGN7 298 aa16.63■□□□□ 0.25
SGMS1-210ENST00000619438 WIPF2Q8TF74 440 aaPredicted RBP16.63■□□□□ 0.25
SGMS1-210ENST00000619438 RNF125Q96EQ8 232 aa16.63■□□□□ 0.25
SGMS1-210ENST00000619438 NOL4LQ96MY1 436 aaPredicted RBP16.63■□□□□ 0.25
SGMS1-210ENST00000619438 CHRDL1Q9BU40 450 aa16.63■□□□□ 0.25
SGMS1-210ENST00000619438 Q9H3A6 140 aa16.63■□□□□ 0.25
SGMS1-210ENST00000619438 WNK1Q9H4A3 2382 aa16.63■□□□□ 0.25
SGMS1-210ENST00000619438 PYY3Q5JQD4 70 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 LEMD1Q68G75 181 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 FMC1Q96HJ9 113 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 TXN2Q99757 166 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 GNB1LQ9BYB4 327 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 CMYA5Q8N3K9 4069 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 F8W735 103 aaPredicted RBP16.62■□□□□ 0.25
SGMS1-210ENST00000619438 GNG7O60262 68 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 UBE2G1P62253 170 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 NDUFA11Q86Y39 141 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 BPIFA4PQ86YQ2 179 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 OR8I2Q8N0Y5 310 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 GPR82Q96P67 336 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 ZNF586Q9NXT0 402 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 C21orf62Q9NYP8 219 aa16.62■□□□□ 0.25
SGMS1-210ENST00000619438 LINC01548A6NM66 108 aa16.61■□□□□ 0.25
SGMS1-210ENST00000619438 TCRAP04437 139 aa16.61■□□□□ 0.25
SGMS1-210ENST00000619438 FABP4P15090 132 aa16.61■□□□□ 0.25
SGMS1-210ENST00000619438 GNG5P63218 68 aa16.61■□□□□ 0.25
SGMS1-210ENST00000619438 SLC35B1P78383 322 aa16.61■□□□□ 0.25
SGMS1-210ENST00000619438 PDZD11Q5EBL8 140 aa16.61■□□□□ 0.25
SGMS1-210ENST00000619438 LYPD1Q8N2G4 141 aa16.61■□□□□ 0.25
SGMS1-210ENST00000619438 MLST8Q9BVC4 326 aa16.61■□□□□ 0.25
SGMS1-210ENST00000619438 TRAV34A0A0B4J273 112 aa16.6■□□□□ 0.25
SGMS1-210ENST00000619438 A0A1W2PRX2 142 aa16.6■□□□□ 0.25
SGMS1-210ENST00000619438 SCGB2A1O75556 95 aa16.6■□□□□ 0.25
SGMS1-210ENST00000619438 MT-ND6P03923 174 aa16.6■□□□□ 0.25
SGMS1-210ENST00000619438 KHDC1LQ5JSQ8 128 aa16.6■□□□□ 0.25
SGMS1-210ENST00000619438 WDR73Q6P4I2 378 aa16.6■□□□□ 0.25
SGMS1-210ENST00000619438 C10orf99Q6UWK7 81 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms